RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 GNALP38405 381 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 HSD17B7P56937 341 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 SERTAD2Q14140 314 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 FZD2Q14332 565 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 TMEM71Q6P5X7 295 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 KCTD18Q6PI47 426 aaPredicted RBP12.55□□□□□ -0.4
USH1C-201ENST00000005226 TTLL10Q6ZVT0 673 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 SLC25A42Q86VD7 318 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 PAQR4Q8N4S7 273 aaPredicted RBP12.55□□□□□ -0.4
USH1C-201ENST00000005226 OR52N4Q8NGI2 321 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 ASB17Q8WXJ9 295 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 LAT2Q9GZY6 243 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 SLC6A15Q9H2J7 730 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 FN3KRPQ9HA64 309 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 OR52A1Q9UKL2 312 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 HHLA2Q9UM44 414 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 SLC5A6Q9Y289 635 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 WDR87Q6ZQQ6 2873 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 A0A0B4J2A0 478 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 IGHV5-51A0A0C4DH38 117 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 TMEM269A0A1B0GVZ9 245 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 FAM221BA6H8Z2 402 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 RAB27BO00194 218 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 SULT1C2O00338 296 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 ATG12O94817 140 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 THEGLP0DJG4 465 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 YPEL5P62699 121 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 INPP5JQ15735 1006 aaPredicted RBP12.55□□□□□ -0.4
USH1C-201ENST00000005226 STK11Q15831 433 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 PLEKHN1Q494U1 663 aaPredicted RBP12.55□□□□□ -0.4
USH1C-201ENST00000005226 DEFB119Q8N690 84 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 OR52N5Q8NH56 324 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 THAP6Q8TBB0 222 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 S1PR5Q9H228 398 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 G6PC2Q9NQR9 355 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 DHCR7Q9UBM7 475 aaKnown RBP12.55□□□□□ -0.4
USH1C-201ENST00000005226 SHPKQ9UHJ6 478 aa12.55□□□□□ -0.4
USH1C-201ENST00000005226 PURGQ9UJV8 347 aaKnown RBP12.55□□□□□ -0.4
USH1C-201ENST00000005226 CNTRLQ7Z7A1 2325 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 TMED7-TICAM2A0A0A6YYA0 188 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 MPTX1A8MV57 137 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 STK17BO94768 372 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 SEMA4FO95754 770 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 ACTL6AO96019 429 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 IGHV4-34P06331 123 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 SLC25A4P12235 298 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 PI3P19957 117 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 CFPP27918 469 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 ROM1Q03395 351 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 SSBP1Q04837 148 aaKnown RBP12.54□□□□□ -0.4
USH1C-201ENST00000005226 UNC119Q13432 240 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 CCINQ13939 588 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 ZNF260Q3ZCT1 412 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 TMEM200AQ86VY9 491 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 PHOSPHO2Q8TCD6 241 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 DNTTIP1Q9H147 329 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 SCPEP1Q9HB40 452 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 CFAP54Q96N23 3096 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 TMEM218A2RU14 115 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 EPOPA6NHQ4 379 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 ZNF208O43345 1280 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 GP1BBP13224 206 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 GABRG2P18507 467 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 IL12BP29460 328 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 INO80EQ8NBZ0 244 aaPredicted RBP12.54□□□□□ -0.4
USH1C-201ENST00000005226 MARCH1Q8TCQ1 289 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 ELP5Q8TE02 316 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 ADIPOR1Q96A54 375 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 CCNL2Q96S94 520 aaPredicted RBP12.54□□□□□ -0.4
USH1C-201ENST00000005226 TBL1XR1Q9BZK7 514 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 TXNIPQ9H3M7 391 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 LANCL2Q9NS86 450 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 CSAG2Q9Y5P2 127 aa12.54□□□□□ -0.4
USH1C-201ENST00000005226 A0A1B0GW55 424 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 DUX4L2P0CJ85 424 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 DUX4L3P0CJ86 424 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 DUX4L4P0CJ87 422 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 DUX4L5P0CJ88 424 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 DUX4L6P0CJ89 424 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 DUX4L7P0CJ90 424 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 RORAP35398 523 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 SERPINF1P36955 418 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 ARRB1P49407 418 aaPredicted RBP12.53□□□□□ -0.4
USH1C-201ENST00000005226 SGCBQ16585 318 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 C9orf50Q5SZB4 431 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 OR5AP2Q8NGF4 316 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 TMED6Q8WW62 240 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 DCUN1D4Q92564 292 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 RRNAD1Q96FB5 475 aaKnown RBP12.53□□□□□ -0.4
USH1C-201ENST00000005226 NICN1Q9BSH3 213 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 MED29Q9NX70 200 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 DUX4Q9UBX2 424 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 KCNK7Q9Y2U2 307 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 R4GMQ9 66 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 PLPP3O14495 311 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 EFSO43281 561 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 SIGLEC6O43699 453 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 SRSF10O75494 262 aaKnown RBP12.53□□□□□ -0.4
USH1C-201ENST00000005226 VWA2Q5GFL6 755 aa12.53□□□□□ -0.4
USH1C-201ENST00000005226 C1orf140Q5VVS0 124 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms