RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 FAM109AQ8N4B1 249 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 DEFB108BQ8NET1 73 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 FAM122AQ96E09 287 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 HYLS1Q96M11 299 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 PBDC1Q9BVG4 233 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 ACTL6AO96019 429 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 HLA-AP01891 365 aaKnown RBP9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 APOA2P02652 100 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 CTXN2P0C2S0 81 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 PTAFRP25105 342 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 SPCS2Q15005 226 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 RBMS2Q15434 407 aaKnown RBP9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 FBXO17Q96EF6 278 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 ESRP2Q9H6T0 727 aaKnown RBP9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 CGGBP1Q9UFW8 167 aaPredicted RBP9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 EXO1Q9UQ84 846 aaKnown RBP9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 SHOXO15266 292 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 GALR2O43603 387 aaPredicted RBP9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 OR2T35Q8NGX2 323 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 SUN5Q8TC36 379 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 RPL3LQ92901 407 aaKnown RBP9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 ANKRD9Q96BM1 317 aaPredicted RBP9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 EIF5A2Q9GZV4 153 aaKnown RBP9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 RYDENQ9NUL5 291 aaKnown RBP9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 B8ZZF3 427 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 CTDSP2O14595 271 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 LIPCP11150 499 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 TGM4P49221 684 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 HCCSP53701 268 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 ISL1P61371 349 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 ARF1P84077 181 aaKnown RBP9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 SYT6Q5T7P8 510 aaPredicted RBP9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 SLC23A3Q6PIS1 610 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 TECTBQ96PL2 329 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 DDA1Q9BW61 102 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 OR51J1Q9H342 316 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 PLAC1Q9HBJ0 212 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 PLCXD1Q9NUJ7 323 aa9.34□□□□□ -0.91
NIPAL3-201ENST00000003912 A0A1W2PPV9 198 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 CT62P0C5K7 136 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 NFYAP23511 347 aaPredicted RBP9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 ETV1P50549 477 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 DOC2BQ14184 412 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 TMPRSS11FQ6ZWK6 438 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 OR1F12Q8NHA8 337 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 UBE2FQ969M7 185 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 SIGLEC11Q96RL6 698 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 SIAEQ9HAT2 523 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 ZNFX1Q9P2E3 1918 aaKnown RBP9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 SCN10AQ9Y5Y9 1956 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 A0A1W2PQD3 144 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 SULT1B1O43704 296 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 IFNA4P05014 189 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 HTR2AP28223 471 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 HOXA1P49639 335 aaPredicted RBP9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 FAHD1Q6P587 224 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 TMEM108Q6UXF1 575 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 TFAP2EQ6VUC0 442 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 C16orf47Q6ZP98 133 aaPredicted RBP9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 IDO2Q6ZQW0 420 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 BTLAQ7Z6A9 289 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 FAM185AQ8N0U4 392 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 GTPBP8Q8N3Z3 284 aaPredicted RBP9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 AKR7LQ8NHP1 331 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 SAP25Q8TEE9 199 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 MBOAT4Q96T53 435 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 KCNJ16Q9NPI9 418 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 C1orf123Q9NWV4 160 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 TAS2R3Q9NYW6 316 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 A4GNTQ9UNA3 340 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 ZNF816-ZNF321PA0A0X1KG74 233 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 TMEM82A0PJX8 343 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 HOXB5P09067 269 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 CALCBP10092 127 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 C21orf58P58505 322 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 RAB35Q15286 201 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 MRM1Q6IN84 353 aaKnown RBP9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 HAGHLQ6PII5 290 aaPredicted RBP9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 PARP16Q8N5Y8 322 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 OR10J5Q8NHC4 309 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 RND1Q92730 232 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 PARP14Q460N5 1801 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 EFSO43281 561 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 DDOSTP39656 456 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 GDNFP39905 211 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 DLX5P56178 289 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 RAB33BQ9H082 229 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 FN3KRPQ9HA64 309 aa9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 RBBP6Q7Z6E9 1792 aaKnown RBP9.33□□□□□ -0.92
NIPAL3-201ENST00000003912 MED6O75586 246 aa9.32□□□□□ -0.92
NIPAL3-201ENST00000003912 GNB2P62879 340 aa9.32□□□□□ -0.92
NIPAL3-201ENST00000003912 SLC9A3R2Q15599 337 aa9.32□□□□□ -0.92
NIPAL3-201ENST00000003912 ADPRMQ3LIE5 342 aa9.32□□□□□ -0.92
NIPAL3-201ENST00000003912 CISD2Q8N5K1 135 aaKnown RBP9.32□□□□□ -0.92
NIPAL3-201ENST00000003912 OR13F1Q8NGS4 319 aa9.32□□□□□ -0.92
NIPAL3-201ENST00000003912 PLK3Q9H4B4 646 aa9.32□□□□□ -0.92
NIPAL3-201ENST00000003912 TRPM6Q9BX84 2022 aa9.32□□□□□ -0.92
NIPAL3-201ENST00000003912 TCRBV16S1A1N1A0A5B0 115 aa9.32□□□□□ -0.92
NIPAL3-201ENST00000003912 EIF4EP06730 217 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms