RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Scgb2b2Q6UGQ3 114 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Cpeb3Q7TN99 716 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 CblcQ80XL1 496 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Fam210aQ8BGY7 273 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Rfc3Q8R323 356 aaKnown RBP20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Gipc3Q8R5M0 297 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Tmem242Q8VCR3 140 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Olfr998Q8VF76 314 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 1700029P11RikQ9CQ68 150 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Slamf9Q9D780 285 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Serinc3Q9QZI9 472 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Orc5Q9WUV0 435 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Spta1P08032 2415 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Muc5acE9QAQ8 3455 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Igkv4-63A0A0G2JFU6 117 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Dpy19l1A6X919 746 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Aldh3b3J3QMK6 479 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Btg1P62325 171 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 JPT1P97825 154 aaKnown RBP20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Adra2aQ01338 450 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 MestQ07646 335 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Gm525Q3V3I5 90 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Fstl4Q5STE3 841 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Vmn1r196Q5SVD5 301 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 HepacamQ640R3 418 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 IppkQ6P1C1 489 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Znf182Q6P560 627 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Pum1Q80U78 1189 aaKnown RBP20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Slc9a8Q8R4D1 576 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Tmem123Q91Z22 195 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Tmed9Q99KF1 235 aaKnown RBP20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Ndufa5Q9CPP6 116 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Slc48a1Q9D8M3 146 aa20.49■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Olfr560A0A1B0GSU5 314 aa20.48■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Ttll3A4Q9E5 927 aa20.48■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Gm43517E9PYS1 339 aa20.48■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Olfr172E9Q8F6 309 aa20.48■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Gosr2O35166 212 aa20.48■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Mab21l1O70299 359 aa20.48■□□□□ 0.87
Upf3a-201ENSMUST00000043767 S1pr2P52592 352 aa20.48■□□□□ 0.87
Upf3a-201ENSMUST00000043767 EgflamQ4VBE4 1017 aa20.48■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Sidt1Q6AXF6 827 aa20.48■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Chst9Q76EC5 413 aa20.48■□□□□ 0.87
Upf3a-201ENSMUST00000043767 SelenoiQ80TA1 398 aa20.48■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Katnb1Q8BG40 658 aa20.48■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Tmem30bQ8BHG3 353 aa20.48■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Gpr107Q8BUV8 551 aa20.48■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Vmn1r23Q8R2D0 302 aa20.48■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Copz2Q9JHH9 205 aa20.48■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Isyna1Q9JHU9 557 aa20.48■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Cln8Q9QUK3 288 aa20.48■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Spg11Q3UHA3 2430 aa20.48■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Dchs1E9PVD3 3291 aa20.48■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Pcdhgb8A0A140LI48 931 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Zfp707F6QUN2 391 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Prdx6O08709 224 aaKnown RBP20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 P01746 140 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 TtkP35761 856 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Ccdc106Q3ULM0 279 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 BC030870Q3V2G4 71 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Zfp9Q8BIS1 454 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 March11Q8CBH7 400 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Olfr378Q8VGT2 314 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Olfr669Q8VGU9 317 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 3110001I22RikQ9CZ70 312 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Dnaja4Q9JMC3 397 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 RbpmsQ9WVB0 197 aaKnown RBP20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Eml6Q5SQM0 1958 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Olfr1025-ps1A0A140T8K3 312 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 4930522L14RikE9QAG4 666 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Obox6G3X9U1 347 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Gm8660K7N6J2 305 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Slc25a33Q3TZX3 320 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Cd47Q61735 303 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Npepl1Q6NSR8 524 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Fbxl2Q8BH16 423 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Prss27Q8BJR6 328 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Crispld2Q8BZQ2 495 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Sectm1aQ921W8 192 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Ddah2Q99LD8 285 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Cdca3Q99M54 266 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Pde7bQ9QXQ1 446 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Tbl2Q9R099 442 aaKnown RBP20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Phf1Q9Z1B8 559 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Gvin1Q80SU7 2427 aa20.47■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Gm21865A0A087WRL2 222 aa20.46■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Olfr485A0A140LJF5 317 aa20.46■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Olfr1366A0A1W2P740 328 aa20.46■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Cyp4a31F8WGU9 509 aa20.46■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Gm3755K7N743 167 aa20.46■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Alx4O35137 399 aa20.46■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Arpc4P59999 168 aaKnown RBP20.46■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Gm136Q3V037 328 aa20.46■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Olfr1101Q7TR59 310 aa20.46■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Slc5a7Q8BGY9 580 aa20.46■□□□□ 0.87
Upf3a-201ENSMUST00000043767 H2afy2Q8CCK0 372 aaKnown RBP20.46■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Olfr686Q8VGX3 317 aa20.46■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Adarb1Q91ZS8 711 aaKnown RBP20.46■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Pop4Q9CR08 221 aa20.46■□□□□ 0.87
Upf3a-201ENSMUST00000043767 Supt7lQ9CZV5 412 aa20.46■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms