RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 DNAJC27Q9NZQ0 273 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 AASSQ9UDR5 926 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 HSPE1-MOB4S4R3N1 261 aa8.63□□□□□ -1.03
PHGDH-222ENST00000641587 MEGF8Q7Z7M0 2845 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 NPIPB13A6NJU9 1138 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 FAM183AA6NL82 134 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 NPIPB4C9JG80 1138 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 ZNF587BE7ETH6 402 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 PRR23D1E9PI22 279 aaPredicted RBP8.62□□□□□ -1.03
PHGDH-222ENST00000641587 E9PQ18 207 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 H7C1C5 153 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 M0R3G1 203 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 IMPA2O14732 288 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 KRT33AO76009 404 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 IGLV1-44P01699 117 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 PRR23D2P0DMB1 279 aaPredicted RBP8.62□□□□□ -1.03
PHGDH-222ENST00000641587 FMO3P31513 532 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 CLRN1P58418 232 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 UBE2NP61088 152 aaKnown RBP8.62□□□□□ -1.03
PHGDH-222ENST00000641587 RPS7P62081 194 aaKnown RBP8.62□□□□□ -1.03
PHGDH-222ENST00000641587 LCN6P62502 163 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 ACTG1P63261 375 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 CAMK2DQ13557 499 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 RIN1Q13671 783 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 CRMP1Q14194 572 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 MSMPQ1L6U9 139 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 MESTQ5EB52 335 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 NIPAL3Q6P499 406 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 PLBD1Q6P4A8 553 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 FAM122BQ7Z309 247 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 ADCK1Q86TW2 530 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 CPOQ8IVL8 374 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 SLC37A3Q8NCC5 494 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 OR9Q1Q8NGQ5 310 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 ZNF519Q8TB69 540 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 BOD1Q96IK1 185 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 TXNDC15Q96J42 360 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 LRR1Q96L50 414 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 Q96MT0 163 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 NMNAT3Q96T66 252 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 EMC6Q9BV81 110 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 FN3KQ9H479 309 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 RERGLQ9H628 205 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 MED20Q9H944 212 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 DYNLRB1Q9NP97 96 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 OBP2BQ9NPH6 170 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 H2AFY2Q9P0M6 372 aaPredicted RBP8.62□□□□□ -1.03
PHGDH-222ENST00000641587 CRNNQ9UBG3 495 aaPredicted RBP8.62□□□□□ -1.03
PHGDH-222ENST00000641587 METRNQ9UJH8 293 aa8.62□□□□□ -1.03
PHGDH-222ENST00000641587 ARPC4-TTLL3A0A0A6YYG9 625 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 LOC102725191A0A1B0GVB3 256 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 FAM157AC9JC47 383 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 WNT9BO14905 357 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 FAM20BO75063 409 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 TRMUO75648 421 aaKnown RBP8.61□□□□□ -1.03
PHGDH-222ENST00000641587 SEC14L2O76054 403 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 TXNDC12O95881 172 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 IGHG1P01857 330 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 ADRA2AP08913 450 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 CDKN2AP42771 156 aaKnown RBP8.61□□□□□ -1.03
PHGDH-222ENST00000641587 CENPAP49450 140 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 DVL1P1P54792 670 aaPredicted RBP8.61□□□□□ -1.03
PHGDH-222ENST00000641587 ISL1P61371 349 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 SNRPGP62308 76 aaKnown RBP8.61□□□□□ -1.03
PHGDH-222ENST00000641587 CDK5R2Q13319 367 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 KLHL12Q53G59 568 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 ARMC4Q5T2S8 1044 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 CREB3L2Q70SY1 520 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 BCDIN3DQ7Z5W3 292 aaKnown RBP8.61□□□□□ -1.03
PHGDH-222ENST00000641587 GID4Q8IVV7 300 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 SYT14Q8NB59 555 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 NOXO1Q8NFA2 376 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 NUP37Q8NFH4 326 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 OR6N1Q8NGY5 312 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 RHOXF1Q8NHV9 184 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 UBASH3BQ8TF42 649 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 TRUB1Q8WWH5 349 aaKnown RBP8.61□□□□□ -1.03
PHGDH-222ENST00000641587 HPS1Q92902 700 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 ZNF566Q969W8 418 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 ZNF837Q96EG3 531 aaPredicted RBP8.61□□□□□ -1.03
PHGDH-222ENST00000641587 OR51V1Q9H2C8 321 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 ZNF442Q9H7R0 627 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 HINT3Q9NQE9 182 aaKnown RBP8.61□□□□□ -1.03
PHGDH-222ENST00000641587 RPRD1BQ9NQG5 326 aaKnown RBP8.61□□□□□ -1.03
PHGDH-222ENST00000641587 UBAP1Q9NZ09 502 aa8.61□□□□□ -1.03
PHGDH-222ENST00000641587 MGAM2Q2M2H8 2515 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 CMYA5Q8N3K9 4069 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 IGHV2OR16-5A0A0B4J2B6 119 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 PRSS37A4D1T9 235 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 OR6C65A6NJZ3 312 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 SNTNA6NMZ2 147 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 ENTPD6O75354 484 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 SLC43A1O75387 559 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 IGKV3-15P01624 115 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 GYPBP06028 91 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 NR2C1P13056 603 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 NPR2P20594 1047 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 CSNK1A1P48729 337 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 ROR2Q01974 943 aaKnown RBP8.6□□□□□ -1.03
PHGDH-222ENST00000641587 SNTB2Q13425 540 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms