RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-222ENST00000640634 C9orf16Q9BUW7 83 aa9.51□□□□□ -0.89
SCARB2-222ENST00000640634 MS4A5Q9H3V2 200 aa9.51□□□□□ -0.89
SCARB2-222ENST00000640634 SIAEQ9HAT2 523 aa9.51□□□□□ -0.89
SCARB2-222ENST00000640634 BAIAP2Q9UQB8 552 aa9.51□□□□□ -0.89
SCARB2-222ENST00000640634 AKAP6Q13023 2319 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 TEX15Q9BXT5 2789 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 ATP6V1G2-DDX39BF2Z307 99 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 H0YHG0 523 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 TSPAN9O75954 239 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 SCGB1D1O95968 90 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 ZNF3P17036 446 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 MSR1P21757 451 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 CD40P25942 277 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 CALCRP30988 508 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 SNAPC1Q16533 368 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 TOR2AQ5JU69 321 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 NCMAPQ5T1S8 102 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 LINC01590Q5TEZ4 76 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 C12orf73Q69YU5 71 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 LINC00346Q8IVM7 164 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 PAQR4Q8N4S7 273 aaPredicted RBP9.5□□□□□ -0.89
SCARB2-222ENST00000640634 TCEANCQ8N8B7 351 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 CPEB3Q8NE35 698 aaKnown RBP9.5□□□□□ -0.89
SCARB2-222ENST00000640634 IL17RDQ8NFM7 739 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 C1orf159Q96HA4 380 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 RCC1LQ96I51 464 aaKnown RBP9.5□□□□□ -0.89
SCARB2-222ENST00000640634 SNX18Q96RF0 628 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 GRIP2Q9C0E4 1043 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 RACGAP1Q9H0H5 632 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 OR51V1Q9H2C8 321 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 WDR76Q9H967 626 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 ASH2LQ9UBL3 628 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 KLHL21Q9UJP4 597 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 LHFPL6Q9Y693 200 aa9.5□□□□□ -0.89
SCARB2-222ENST00000640634 UBE2CO00762 179 aa9.49□□□□□ -0.89
SCARB2-222ENST00000640634 IFNGP01579 166 aa9.49□□□□□ -0.89
SCARB2-222ENST00000640634 IGKV3-15P01624 115 aa9.49□□□□□ -0.89
SCARB2-222ENST00000640634 IGLV1-44P01699 117 aa9.49□□□□□ -0.89
SCARB2-222ENST00000640634 HLA-DQA2P01906 255 aa9.49□□□□□ -0.89
SCARB2-222ENST00000640634 SNRNP70P08621 437 aaKnown RBP9.49□□□□□ -0.89
SCARB2-222ENST00000640634 NR2C1P13056 603 aa9.49□□□□□ -0.89
SCARB2-222ENST00000640634 ZNF14P17017 642 aaPredicted RBP9.49□□□□□ -0.89
SCARB2-222ENST00000640634 GSK3AP49840 483 aa9.49□□□□□ -0.89
SCARB2-222ENST00000640634 BEX5Q5H9J7 111 aa9.49□□□□□ -0.89
SCARB2-222ENST00000640634 PABPC1L2AQ5JQF8 200 aa9.49□□□□□ -0.89
SCARB2-222ENST00000640634 FAM27BQ5VT28 67 aa9.49□□□□□ -0.89
SCARB2-222ENST00000640634 DMRTA1Q5VZB9 504 aa9.49□□□□□ -0.89
SCARB2-222ENST00000640634 ZNF774Q6NX45 483 aa9.49□□□□□ -0.89
SCARB2-222ENST00000640634 OR6K6Q8NGW6 343 aa9.49□□□□□ -0.89
SCARB2-222ENST00000640634 FNDC8Q8TC99 324 aa9.49□□□□□ -0.89
SCARB2-222ENST00000640634 ZMYND19Q96E35 227 aaPredicted RBP9.49□□□□□ -0.89
SCARB2-222ENST00000640634 SLC38A2Q96QD8 506 aa9.49□□□□□ -0.89
SCARB2-222ENST00000640634 WNT5BQ9H1J7 359 aa9.49□□□□□ -0.89
SCARB2-222ENST00000640634 DCLRE1BQ9H816 532 aa9.49□□□□□ -0.89
SCARB2-222ENST00000640634 RNPEPL1Q9HAU8 725 aa9.49□□□□□ -0.89
SCARB2-222ENST00000640634 MOKQ9UQ07 419 aa9.49□□□□□ -0.89
SCARB2-222ENST00000640634 FKBP7Q9Y680 259 aa9.49□□□□□ -0.89
SCARB2-222ENST00000640634 SPG11Q96JI7 2443 aa9.49□□□□□ -0.89
SCARB2-222ENST00000640634 VPS13CQ709C8 3753 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 SHISA9B4DS77 424 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 E9PQ18 207 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 RER1O15258 196 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 TLX2O43763 284 aaPredicted RBP9.48□□□□□ -0.89
SCARB2-222ENST00000640634 TSC22D2O75157 780 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 FARS2O95363 451 aaKnown RBP9.48□□□□□ -0.89
SCARB2-222ENST00000640634 CLIC3O95833 236 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 CBR1P16152 277 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 NPR2P20594 1047 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 APEX1P27695 318 aaKnown RBP9.48□□□□□ -0.89
SCARB2-222ENST00000640634 CRABP1P29762 137 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 GGT2P36268 569 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 ECI1P42126 302 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 EFNB1P98172 346 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 PSG4Q00888 419 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 KLHL12Q53G59 568 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 OGFRL1Q5TC84 451 aaPredicted RBP9.48□□□□□ -0.89
SCARB2-222ENST00000640634 SLC22A25Q6T423 547 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 ZNF704Q6ZNC4 412 aaPredicted RBP9.48□□□□□ -0.89
SCARB2-222ENST00000640634 CFAP77Q6ZQR2 320 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 CXXC5Q7LFL8 322 aaKnown RBP9.48□□□□□ -0.89
SCARB2-222ENST00000640634 CDC20BQ86Y33 519 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 OR2T4Q8NH00 348 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 FAM81AQ8TBF8 368 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 SLC7A6Q92536 515 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 C14orf79Q96F83 325 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 RNF121Q9H920 327 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 CRNNQ9UBG3 495 aaPredicted RBP9.48□□□□□ -0.89
SCARB2-222ENST00000640634 COMMD3-BMI1R4GMX3 469 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 NOTCH2Q04721 2471 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 CACNA1DQ01668 2161 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 MAP1AP78559 2803 aaPredicted RBP9.48□□□□□ -0.89
SCARB2-222ENST00000640634 CCDC182A6NF36 153 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 PRR23D1E9PI22 279 aaPredicted RBP9.48□□□□□ -0.89
SCARB2-222ENST00000640634 SELENOFO60613 162 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 UBL3O95164 117 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 RAB36O95755 333 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 CST2P09228 141 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 PRR23D2P0DMB1 279 aaPredicted RBP9.48□□□□□ -0.89
SCARB2-222ENST00000640634 SLC2A5P22732 501 aa9.48□□□□□ -0.89
SCARB2-222ENST00000640634 ANOS1P23352 680 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms