RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 C8orf33Q9H7E9 229 aaPredicted RBP18.04■□□□□ 0.48
SYNGAP1-227ENST00000638142 COMMD9Q9P000 198 aa18.04■□□□□ 0.48
SYNGAP1-227ENST00000638142 KLK13Q9UKR3 277 aa18.04■□□□□ 0.48
SYNGAP1-227ENST00000638142 TNFSF18Q9UNG2 199 aa18.04■□□□□ 0.48
SYNGAP1-227ENST00000638142 EMC9Q9Y3B6 208 aa18.04■□□□□ 0.48
SYNGAP1-227ENST00000638142 CDC14CA4D256 554 aa18.04■□□□□ 0.48
SYNGAP1-227ENST00000638142 PRKACAP17612 351 aa18.04■□□□□ 0.48
SYNGAP1-227ENST00000638142 RAB6AP20340 208 aa18.04■□□□□ 0.48
SYNGAP1-227ENST00000638142 ARRB1P49407 418 aaPredicted RBP18.04■□□□□ 0.48
SYNGAP1-227ENST00000638142 PLCXD2Q0VAA5 305 aa18.04■□□□□ 0.48
SYNGAP1-227ENST00000638142 PHF19Q5T6S3 580 aa18.04■□□□□ 0.48
SYNGAP1-227ENST00000638142 OR10K1Q8NGX5 313 aa18.04■□□□□ 0.48
SYNGAP1-227ENST00000638142 TGM7Q96PF1 710 aa18.04■□□□□ 0.48
SYNGAP1-227ENST00000638142 PRRT1Q99946 306 aa18.04■□□□□ 0.48
SYNGAP1-227ENST00000638142 CUTCQ9NTM9 273 aa18.04■□□□□ 0.48
SYNGAP1-227ENST00000638142 CLEC1BQ9P126 229 aa18.04■□□□□ 0.48
SYNGAP1-227ENST00000638142 CYP8B1Q9UNU6 501 aa18.04■□□□□ 0.48
SYNGAP1-227ENST00000638142 NOP16Q9Y3C1 178 aaKnown RBP18.04■□□□□ 0.48
SYNGAP1-227ENST00000638142 LOC107986453A0A1B0GWG9 222 aa18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 WISP1O95388 367 aa18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 HLA-AP01891 365 aaKnown RBP18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 ZNF28P17035 718 aa18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 PPM1FP49593 454 aaPredicted RBP18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 NR0B1P51843 470 aaKnown RBP18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 GFERP55789 205 aa18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 SPOCK1Q08629 439 aa18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 SCGB2B2Q4G0G5 96 aa18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 RAB12Q6IQ22 244 aa18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 C11orf87Q6NUJ2 197 aa18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 JMJD6Q6NYC1 403 aaPredicted RBP18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 ZNF704Q6ZNC4 412 aaPredicted RBP18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 MOB3CQ70IA8 216 aa18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 C9orf40Q8IXQ3 194 aa18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 MARC2Q969Z3 335 aa18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 FOXRED1Q96CU9 486 aaPredicted RBP18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 SLC6A7Q99884 636 aa18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 BARX1Q9HBU1 254 aaPredicted RBP18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 FBXO4Q9UKT5 387 aa18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 FARSAQ9Y285 508 aaKnown RBP18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 COA3Q9Y2R0 106 aaPredicted RBP18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 CPAMD8Q8IZJ3 1885 aa18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 AHSA1O95433 338 aa18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 MOGAT2Q3SYC2 334 aa18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 C17orf107Q6ZR85 190 aa18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 TTLL10Q6ZVT0 673 aa18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 GRINAQ7Z429 371 aa18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 OR5T2Q8NGG2 359 aa18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 ZBTB8AQ96BR9 441 aa18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 NPAS1Q99742 590 aa18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 ZMAT3Q9HA38 289 aaKnown RBP18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 G6PC2Q9NQR9 355 aa18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 OR52A1Q9UKL2 312 aa18.03■□□□□ 0.48
SYNGAP1-227ENST00000638142 TMEM235A6NFC5 223 aa18.02■□□□□ 0.48
SYNGAP1-227ENST00000638142 BCL2L11O43521 198 aa18.02■□□□□ 0.48
SYNGAP1-227ENST00000638142 OR2T1O43869 369 aa18.02■□□□□ 0.48
SYNGAP1-227ENST00000638142 HLA-GP17693 338 aa18.02■□□□□ 0.48
SYNGAP1-227ENST00000638142 MPZP25189 248 aa18.02■□□□□ 0.48
SYNGAP1-227ENST00000638142 OR1D4P47884 311 aa18.02■□□□□ 0.48
SYNGAP1-227ENST00000638142 SLC26A5P58743 744 aa18.02■□□□□ 0.48
SYNGAP1-227ENST00000638142 ELOCQ15369 112 aa18.02■□□□□ 0.48
SYNGAP1-227ENST00000638142 C5orf46Q6UWT4 87 aa18.02■□□□□ 0.48
SYNGAP1-227ENST00000638142 TMEM17Q86X19 198 aa18.02■□□□□ 0.48
SYNGAP1-227ENST00000638142 LYPD6Q86Y78 171 aa18.02■□□□□ 0.48
SYNGAP1-227ENST00000638142 FAM174AQ8TBP5 190 aa18.02■□□□□ 0.48
SYNGAP1-227ENST00000638142 AQP3Q92482 292 aa18.02■□□□□ 0.48
SYNGAP1-227ENST00000638142 PHYHIPLQ96FC7 376 aa18.02■□□□□ 0.48
SYNGAP1-227ENST00000638142 LRRC46Q96FV0 321 aa18.02■□□□□ 0.48
SYNGAP1-227ENST00000638142 PDCD10Q9BUL8 212 aa18.02■□□□□ 0.48
SYNGAP1-227ENST00000638142 TMEM185BQ9H7F4 350 aa18.02■□□□□ 0.48
SYNGAP1-227ENST00000638142 A0A1W2PPC4 97 aa18.01■□□□□ 0.47
SYNGAP1-227ENST00000638142 METTL21EPA6NDL7 271 aa18.01■□□□□ 0.47
SYNGAP1-227ENST00000638142 STARP49675 285 aa18.01■□□□□ 0.47
SYNGAP1-227ENST00000638142 PNLIPRP2P54317 469 aa18.01■□□□□ 0.47
SYNGAP1-227ENST00000638142 ZP2Q05996 745 aa18.01■□□□□ 0.47
SYNGAP1-227ENST00000638142 TMEM244Q5VVB8 128 aa18.01■□□□□ 0.47
SYNGAP1-227ENST00000638142 SLC25A42Q86VD7 318 aa18.01■□□□□ 0.47
SYNGAP1-227ENST00000638142 CD207Q9UJ71 328 aa18.01■□□□□ 0.47
SYNGAP1-227ENST00000638142 KNL1Q8NG31 2342 aa18.01■□□□□ 0.47
SYNGAP1-227ENST00000638142 OR14I1A6ND48 311 aa18.01■□□□□ 0.47
SYNGAP1-227ENST00000638142 ZNF823P16415 610 aa18.01■□□□□ 0.47
SYNGAP1-227ENST00000638142 HYAL4Q2M3T9 481 aa18.01■□□□□ 0.47
SYNGAP1-227ENST00000638142 RNASE10Q5GAN6 216 aaKnown RBP18.01■□□□□ 0.47
SYNGAP1-227ENST00000638142 VWA2Q5GFL6 755 aa18.01■□□□□ 0.47
SYNGAP1-227ENST00000638142 OR10K2Q6IF99 312 aa18.01■□□□□ 0.47
SYNGAP1-227ENST00000638142 GPR119Q8TDV5 335 aa18.01■□□□□ 0.47
SYNGAP1-227ENST00000638142 WWTR1Q9GZV5 400 aa18.01■□□□□ 0.47
SYNGAP1-227ENST00000638142 GDF2Q9UK05 429 aaPredicted RBP18.01■□□□□ 0.47
SYNGAP1-227ENST00000638142 RAB22AQ9UL26 194 aa18.01■□□□□ 0.47
SYNGAP1-227ENST00000638142 VSIG4Q9Y279 399 aa18.01■□□□□ 0.47
SYNGAP1-227ENST00000638142 SLCO1B1Q9Y6L6 691 aa18.01■□□□□ 0.47
SYNGAP1-227ENST00000638142 MPZL1O95297 269 aa18■□□□□ 0.47
SYNGAP1-227ENST00000638142 ZBTB25P24278 435 aa18■□□□□ 0.47
SYNGAP1-227ENST00000638142 FLI1Q01543 452 aaPredicted RBP18■□□□□ 0.47
SYNGAP1-227ENST00000638142 DNM1P34Q6PK57 102 aa18■□□□□ 0.47
SYNGAP1-227ENST00000638142 DEGS2Q6QHC5 323 aa18■□□□□ 0.47
SYNGAP1-227ENST00000638142 LYG2Q86SG7 212 aa18■□□□□ 0.47
SYNGAP1-227ENST00000638142 LINC00518Q8N0U6 118 aa18■□□□□ 0.47
SYNGAP1-227ENST00000638142 SLC26A10Q8NG04 563 aa18■□□□□ 0.47
SYNGAP1-227ENST00000638142 DAZLQ92904 295 aaKnown RBP18■□□□□ 0.47
SYNGAP1-227ENST00000638142 MVB12AQ96EY5 273 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms