RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 OR2Z1Q8NG97 314 aa15.57■□□□□ 0.08
CLN6-220ENST00000637450 SLC7A13Q8TCU3 470 aa15.57■□□□□ 0.08
CLN6-220ENST00000637450 SLC7A6Q92536 515 aa15.57■□□□□ 0.08
CLN6-220ENST00000637450 DVL3Q92997 716 aaPredicted RBP15.57■□□□□ 0.08
CLN6-220ENST00000637450 PTP4A1Q93096 173 aa15.57■□□□□ 0.08
CLN6-220ENST00000637450 COG8Q96MW5 612 aa15.57■□□□□ 0.08
CLN6-220ENST00000637450 NDEL1Q9GZM8 345 aa15.57■□□□□ 0.08
CLN6-220ENST00000637450 NRIP3Q9NQ35 241 aa15.57■□□□□ 0.08
CLN6-220ENST00000637450 MMP26Q9NRE1 261 aa15.57■□□□□ 0.08
CLN6-220ENST00000637450 IL19Q9UHD0 177 aa15.57■□□□□ 0.08
CLN6-220ENST00000637450 TMEM5Q9Y2B1 443 aa15.57■□□□□ 0.08
CLN6-220ENST00000637450 ENPP4Q9Y6X5 453 aa15.57■□□□□ 0.08
CLN6-220ENST00000637450 A0A1W2PRQ8 180 aa15.56■□□□□ 0.08
CLN6-220ENST00000637450 OR6C6A6NF89 314 aa15.56■□□□□ 0.08
CLN6-220ENST00000637450 SLC16A7O60669 478 aa15.56■□□□□ 0.08
CLN6-220ENST00000637450 GSK3BP49841 420 aa15.56■□□□□ 0.08
CLN6-220ENST00000637450 LSM6P62312 80 aaKnown RBP15.56■□□□□ 0.08
CLN6-220ENST00000637450 DGCR6Q14129 220 aa15.56■□□□□ 0.08
CLN6-220ENST00000637450 GPR139Q6DWJ6 353 aa15.56■□□□□ 0.08
CLN6-220ENST00000637450 CYP4Z1Q86W10 505 aa15.56■□□□□ 0.08
CLN6-220ENST00000637450 GLB1L2Q8IW92 636 aa15.56■□□□□ 0.08
CLN6-220ENST00000637450 KLHL36Q8N4N3 616 aa15.56■□□□□ 0.08
CLN6-220ENST00000637450 SPICQ8N5J4 248 aa15.56■□□□□ 0.08
CLN6-220ENST00000637450 DEFB108BQ8NET1 73 aa15.56■□□□□ 0.08
CLN6-220ENST00000637450 RASD2Q96D21 266 aa15.56■□□□□ 0.08
CLN6-220ENST00000637450 FAM46AQ96IP4 442 aaKnown RBP15.56■□□□□ 0.08
CLN6-220ENST00000637450 CCDC134Q9H6E4 229 aa15.56■□□□□ 0.08
CLN6-220ENST00000637450 NTN4Q9HB63 628 aa15.56■□□□□ 0.08
CLN6-220ENST00000637450 PATZ1Q9HBE1 687 aaKnown RBP15.56■□□□□ 0.08
CLN6-220ENST00000637450 PLEK2Q9NYT0 353 aa15.56■□□□□ 0.08
CLN6-220ENST00000637450 VSX1Q9NZR4 365 aaPredicted RBP15.56■□□□□ 0.08
CLN6-220ENST00000637450 SIGLEC7Q9Y286 467 aa15.56■□□□□ 0.08
CLN6-220ENST00000637450 COA3Q9Y2R0 106 aaPredicted RBP15.56■□□□□ 0.08
CLN6-220ENST00000637450 TRAPPC2LH3BP13 241 aa15.55■□□□□ 0.08
CLN6-220ENST00000637450 SURF4O15260 269 aa15.55■□□□□ 0.08
CLN6-220ENST00000637450 KHDRBS3O75525 346 aaKnown RBP15.55■□□□□ 0.08
CLN6-220ENST00000637450 NDUFB2O95178 105 aa15.55■□□□□ 0.08
CLN6-220ENST00000637450 SDHAP31040 664 aa15.55■□□□□ 0.08
CLN6-220ENST00000637450 SLC6A9P48067 706 aa15.55■□□□□ 0.08
CLN6-220ENST00000637450 BTG1P62324 171 aa15.55■□□□□ 0.08
CLN6-220ENST00000637450 GUCY1A3Q02108 690 aa15.55■□□□□ 0.08
CLN6-220ENST00000637450 KRR1Q13601 381 aaKnown RBP15.55■□□□□ 0.08
CLN6-220ENST00000637450 ZMYND11Q15326 602 aa15.55■□□□□ 0.08
CLN6-220ENST00000637450 TUSC1Q2TAM9 212 aa15.55■□□□□ 0.08
CLN6-220ENST00000637450 CCDC92Q53HC0 331 aaPredicted RBP15.55■□□□□ 0.08
CLN6-220ENST00000637450 OTPQ5XKR4 325 aa15.55■□□□□ 0.08
CLN6-220ENST00000637450 C1orf94Q6P1W5 598 aa15.55■□□□□ 0.08
CLN6-220ENST00000637450 OR1F12Q8NHA8 337 aa15.55■□□□□ 0.08
CLN6-220ENST00000637450 ITLN1Q8WWA0 313 aa15.55■□□□□ 0.08
CLN6-220ENST00000637450 C22orf15Q8WYQ4 148 aa15.55■□□□□ 0.08
CLN6-220ENST00000637450 ZMYND19Q96E35 227 aaPredicted RBP15.55■□□□□ 0.08
CLN6-220ENST00000637450 SIGLEC11Q96RL6 698 aa15.55■□□□□ 0.08
CLN6-220ENST00000637450 GPX7Q96SL4 187 aaPredicted RBP15.55■□□□□ 0.08
CLN6-220ENST00000637450 SYT4Q9H2B2 425 aa15.55■□□□□ 0.08
CLN6-220ENST00000637450 EFCAB1Q9HAE3 211 aa15.55■□□□□ 0.08
CLN6-220ENST00000637450 ASH2LQ9UBL3 628 aa15.55■□□□□ 0.08
CLN6-220ENST00000637450 PPP1R3CQ9UQK1 317 aa15.55■□□□□ 0.08
CLN6-220ENST00000637450 J3QW42 95 aa15.54■□□□□ 0.08
CLN6-220ENST00000637450 IMPA2O14732 288 aa15.54■□□□□ 0.08
CLN6-220ENST00000637450 H1F0P07305 194 aaKnown RBP15.54■□□□□ 0.08
CLN6-220ENST00000637450 RAC2P15153 192 aa15.54■□□□□ 0.08
CLN6-220ENST00000637450 EGR1P18146 543 aa15.54■□□□□ 0.08
CLN6-220ENST00000637450 ERFP50548 548 aa15.54■□□□□ 0.08
CLN6-220ENST00000637450 UBA52P62987 128 aaKnown RBP15.54■□□□□ 0.08
CLN6-220ENST00000637450 ZNF154Q13106 437 aa15.54■□□□□ 0.08
CLN6-220ENST00000637450 KCNMB1Q16558 191 aa15.54■□□□□ 0.08
CLN6-220ENST00000637450 HACD2Q6Y1H2 254 aa15.54■□□□□ 0.08
CLN6-220ENST00000637450 POP5Q969H6 163 aaKnown RBP15.54■□□□□ 0.08
CLN6-220ENST00000637450 FAM162AQ96A26 154 aa15.54■□□□□ 0.08
CLN6-220ENST00000637450 OR2V2Q96R30 315 aa15.54■□□□□ 0.08
CLN6-220ENST00000637450 NUAK2Q9H093 628 aa15.54■□□□□ 0.08
CLN6-220ENST00000637450 RERGLQ9H628 205 aa15.54■□□□□ 0.08
CLN6-220ENST00000637450 NDUFAF4Q9P032 175 aa15.54■□□□□ 0.08
CLN6-220ENST00000637450 ATPIF1Q9UII2 106 aa15.54■□□□□ 0.08
CLN6-220ENST00000637450 IER3IP1Q9Y5U9 82 aa15.54■□□□□ 0.08
CLN6-220ENST00000637450 AUP1Q9Y679 476 aa15.54■□□□□ 0.08
CLN6-220ENST00000637450 F5H0A9 414 aaPredicted RBP15.53■□□□□ 0.08
CLN6-220ENST00000637450 TMEM178BH3BS89 294 aa15.53■□□□□ 0.08
CLN6-220ENST00000637450 NDUFAB1O14561 156 aa15.53■□□□□ 0.08
CLN6-220ENST00000637450 RER1O15258 196 aa15.53■□□□□ 0.08
CLN6-220ENST00000637450 CCDC22O60826 627 aa15.53■□□□□ 0.08
CLN6-220ENST00000637450 TXNDC12O95881 172 aa15.53■□□□□ 0.08
CLN6-220ENST00000637450 DBHP09172 617 aa15.53■□□□□ 0.08
CLN6-220ENST00000637450 NCK1P16333 377 aa15.53■□□□□ 0.08
CLN6-220ENST00000637450 ZNF12P17014 697 aa15.53■□□□□ 0.08
CLN6-220ENST00000637450 OMPP47874 163 aa15.53■□□□□ 0.08
CLN6-220ENST00000637450 RGS6P49758 472 aa15.53■□□□□ 0.08
CLN6-220ENST00000637450 FXYD6P3P58550 94 aa15.53■□□□□ 0.08
CLN6-220ENST00000637450 SEC61A1P61619 476 aaKnown RBP15.53■□□□□ 0.08
CLN6-220ENST00000637450 FBXW12Q6X9E4 464 aa15.53■□□□□ 0.08
CLN6-220ENST00000637450 DPY19L2P2Q6ZN68 376 aa15.53■□□□□ 0.08
CLN6-220ENST00000637450 PTCHD4Q6ZW05 846 aa15.53■□□□□ 0.08
CLN6-220ENST00000637450 ADCK1Q86TW2 530 aa15.53■□□□□ 0.08
CLN6-220ENST00000637450 SGMS2Q8NHU3 365 aa15.53■□□□□ 0.08
CLN6-220ENST00000637450 KCTD14Q9BQ13 255 aaPredicted RBP15.53■□□□□ 0.08
CLN6-220ENST00000637450 GCM1Q9NP62 436 aa15.53■□□□□ 0.08
CLN6-220ENST00000637450 IL20RAQ9UHF4 553 aa15.53■□□□□ 0.08
CLN6-220ENST00000637450 RPS6KA6Q9UK32 745 aa15.53■□□□□ 0.08
CLN6-220ENST00000637450 FAM32AQ9Y421 112 aaKnown RBP15.53■□□□□ 0.08
CLN6-220ENST00000637450 DYSFO75923 2080 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms