RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 TATDN3Q17R31 274 aa16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 HLA-BQ31612 363 aa16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 TM4SF18Q96CE8 201 aa16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 Q96M85 177 aa16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 KLF13Q9Y2Y9 288 aaPredicted RBP16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 IMPA1P29218 277 aa16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 SLC46A1Q96NT5 459 aa16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 SRRQ9GZT4 340 aa16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 SLC22A11Q9NSA0 550 aa16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 UBE2MP61081 183 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 LDLRAD1Q5T700 205 aa16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 DRAM2Q6UX65 266 aa16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 RHOUQ7L0Q8 258 aa16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 LRRTM1Q86UE6 522 aa16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 SLC22A24Q8N4F4 322 aa16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 DCAF13Q9NV06 445 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-227ENST00000636549 GFYI3L273 518 aa16.27■□□□□ 0.2
CACNA1A-227ENST00000636549 ZNF766Q5HY98 468 aa16.27■□□□□ 0.2
CACNA1A-227ENST00000636549 H1FNTQ75WM6 255 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-227ENST00000636549 C2CD4CQ8TF44 421 aa16.27■□□□□ 0.2
CACNA1A-227ENST00000636549 SEC22CQ9BRL7 303 aa16.27■□□□□ 0.2
CACNA1A-227ENST00000636549 SLC16A6O15403 523 aa16.27■□□□□ 0.2
CACNA1A-227ENST00000636549 NDUFB3O43676 98 aa16.27■□□□□ 0.2
CACNA1A-227ENST00000636549 LRRC10Q5BKY1 277 aa16.27■□□□□ 0.2
CACNA1A-227ENST00000636549 OR2T11Q8NH01 316 aa16.27■□□□□ 0.2
CACNA1A-227ENST00000636549 SLC7A13Q8TCU3 470 aa16.27■□□□□ 0.2
CACNA1A-227ENST00000636549 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-227ENST00000636549 RTP4Q96DX8 246 aa16.27■□□□□ 0.2
CACNA1A-227ENST00000636549 TCHHQ07283 1943 aa16.27■□□□□ 0.2
CACNA1A-227ENST00000636549 LYZL6O75951 148 aa16.27■□□□□ 0.2
CACNA1A-227ENST00000636549 FOXK2Q01167 660 aa16.27■□□□□ 0.2
CACNA1A-227ENST00000636549 DNAJB6O75190 326 aa16.27■□□□□ 0.19
CACNA1A-227ENST00000636549 WIPI1Q5MNZ9 446 aaPredicted RBP16.27■□□□□ 0.19
CACNA1A-227ENST00000636549 LAIR1Q6GTX8 287 aa16.27■□□□□ 0.19
CACNA1A-227ENST00000636549 C17orf78Q8N4C9 275 aa16.27■□□□□ 0.19
CACNA1A-227ENST00000636549 OR1L4Q8NGR5 311 aa16.27■□□□□ 0.19
CACNA1A-227ENST00000636549 UFC1Q9Y3C8 167 aa16.27■□□□□ 0.19
CACNA1A-227ENST00000636549 CDX4O14627 284 aaPredicted RBP16.27■□□□□ 0.19
CACNA1A-227ENST00000636549 UBBP0CG47 229 aa16.27■□□□□ 0.19
CACNA1A-227ENST00000636549 GDNFP39905 211 aa16.27■□□□□ 0.19
CACNA1A-227ENST00000636549 OR1C1Q15619 314 aa16.27■□□□□ 0.19
CACNA1A-227ENST00000636549 ARL6IP6Q8N6S5 226 aa16.27■□□□□ 0.19
CACNA1A-227ENST00000636549 LTB4R2Q9NPC1 389 aa16.27■□□□□ 0.19
CACNA1A-227ENST00000636549 A0A0D9SG52 128 aa16.27■□□□□ 0.19
CACNA1A-227ENST00000636549 HYAL3O43820 417 aaPredicted RBP16.27■□□□□ 0.19
CACNA1A-227ENST00000636549 CD40P25942 277 aa16.27■□□□□ 0.19
CACNA1A-227ENST00000636549 PPP2CBP62714 309 aa16.27■□□□□ 0.19
CACNA1A-227ENST00000636549 PPP2CAP67775 309 aa16.27■□□□□ 0.19
CACNA1A-227ENST00000636549 SPATS1Q496A3 300 aa16.27■□□□□ 0.19
CACNA1A-227ENST00000636549 H3F3CQ6NXT2 135 aa16.27■□□□□ 0.19
CACNA1A-227ENST00000636549 RNASEK-C17orf49H0YIS7 233 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 TFPI2P48307 235 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 TPPP2P59282 170 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 ZNF90Q03938 601 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 NFATC3Q12968 1075 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 ZMAT1Q5H9K5 638 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 PGBD5Q8N414 524 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 YKT6O15498 198 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 GLAP06280 429 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 ALOX5APP20292 161 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 LINC00052Q96N35 136 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 OR52A5Q9H2C5 316 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 COA4Q9NYJ1 87 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 NID2Q14112 1375 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 FABP1P07148 127 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 DUSP1P28562 367 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 RAB40BQ12829 278 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 SLC24A4Q8NFF2 622 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 PGAP3Q96FM1 320 aaPredicted RBP16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 TMPRSS13Q9BYE2 586 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 CHST8Q9H2A9 424 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 RABL2AQ9UBK7 228 aaPredicted RBP16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 RABL2BQ9UNT1 228 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 BCL7AQ4VC05 210 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 NOXA1Q86UR1 476 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 OR4A4PQ8NGN8 299 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 ALKBH3Q96Q83 286 aaPredicted RBP16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 TXNIPQ9H3M7 391 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 NAV1Q8NEY1 1877 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 CTNSO60931 367 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 FPR3P25089 353 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 MPGP29372 298 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 OPRK1P41145 380 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 SNTB1Q13884 538 aaKnown RBP16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 ADGRG3Q86Y34 549 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 GDPD1Q8N9F7 314 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 ISG20Q96AZ6 181 aaKnown RBP16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 ZBP1Q9H171 429 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 ACOXLQ9NUZ1 547 aa16.26■□□□□ 0.19
CACNA1A-227ENST00000636549 ZNF425Q6IV72 752 aa16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 MBOAT2Q6ZWT7 520 aa16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 OR10R2Q8NGX6 335 aa16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 LMO3Q8TAP4 145 aa16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 LOC102723971A0A1B0GUV8 181 aa16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 ZNF724A8MTY0 619 aa16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 HLA-HP01893 362 aa16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 SDHBP21912 280 aa16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 EMDP50402 254 aa16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 TMEM267Q0VDI3 215 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 KMT5CQ86Y97 462 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms