RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 OGNP20774 298 aaKnown RBP2.51□□□□□ -2.01
PSPC1-208ENST00000635562 GPX3P22352 226 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 PSMA1P25786 263 aaKnown RBP2.51□□□□□ -2.01
PSPC1-208ENST00000635562 HMGB2P26583 209 aaKnown RBP2.51□□□□□ -2.01
PSPC1-208ENST00000635562 GDF1P27539 372 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 NTSP30990 170 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 CA5AP35218 305 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 CEACAM6P40199 344 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 VHLP40337 213 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 OPRD1P41143 372 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 LEPP41159 167 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 RPL5P46777 297 aaKnown RBP2.51□□□□□ -2.01
PSPC1-208ENST00000635562 QARSP47897 775 aaKnown RBP2.51□□□□□ -2.01
PSPC1-208ENST00000635562 RAB7AP51149 207 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 CCR6P51684 374 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 STC1P52823 247 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 LBX1P52954 281 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 CLDN12P56749 244 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 OR10A3P58181 314 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 VSX2P58304 361 aaPredicted RBP2.51□□□□□ -2.01
PSPC1-208ENST00000635562 DSCR9P59020 149 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 RHOAP61586 193 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 NUTF2P61970 127 aaKnown RBP2.51□□□□□ -2.01
PSPC1-208ENST00000635562 RPL32P62910 135 aaKnown RBP2.51□□□□□ -2.01
PSPC1-208ENST00000635562 SLC35B1P78383 322 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 ELF3P78545 371 aaPredicted RBP2.51□□□□□ -2.01
PSPC1-208ENST00000635562 MS4A2Q01362 244 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 DEFA6Q01524 100 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 HMGCS1Q01581 520 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 RELAQ04206 551 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 PLA2G7Q13093 441 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 GPR17Q13304 367 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 SLC39A6Q13433 755 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 KLF5Q13887 457 aaPredicted RBP2.51□□□□□ -2.01
PSPC1-208ENST00000635562 CEACAM7Q14002 265 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 PRPSAP1Q14558 356 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 ZNF234Q14588 700 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 TEAD2Q15562 447 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 TAL2Q16559 108 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 CYP51A1Q16850 503 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 FAM74A3Q4VXF1 159 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 SPIN4Q56A73 249 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 OR4A47Q6IF82 309 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 MED27Q6P2C8 311 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 SLC25A47Q6Q0C1 308 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 Q6ZT83 130 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 LANCL3Q6ZV70 420 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 ASCL5Q7RTU5 278 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 COX8CQ7Z4L0 72 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 FAM19A1Q7Z5A9 133 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 THOC6Q86W42 341 aaKnown RBP2.51□□□□□ -2.01
PSPC1-208ENST00000635562 MMD2Q8IY49 270 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 CMTM1Q8IZ96 169 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 MS4A15Q8N5U1 240 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 OR10G3Q8NGC4 313 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 OR8J3Q8NGG0 315 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 OR1B1Q8NGR6 318 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 OR6K6Q8NGW6 343 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 OR10K1Q8NGX5 313 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 FAM45AQ8TCE6 357 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 C16orf78Q8WTQ4 265 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 TMEM234Q8WY98 164 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 NEUROG1Q92886 237 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.51□□□□□ -2.01
PSPC1-208ENST00000635562 TSACCQ96A04 125 aaPredicted RBP2.51□□□□□ -2.01
PSPC1-208ENST00000635562 RERGQ96A58 199 aaPredicted RBP2.51□□□□□ -2.01
PSPC1-208ENST00000635562 DCPSQ96C86 337 aaKnown RBP2.51□□□□□ -2.01
PSPC1-208ENST00000635562 NTNG2Q96CW9 530 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 CCDC126Q96EE4 140 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 OR10C1Q96KK4 312 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 KCTD7Q96MP8 289 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 NIPSNAP3BQ9BS92 247 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 RPP25Q9BUL9 199 aaKnown RBP2.51□□□□□ -2.01
PSPC1-208ENST00000635562 YIPF3Q9GZM5 350 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 NXF5Q9H1B4 397 aaKnown RBP2.51□□□□□ -2.01
PSPC1-208ENST00000635562 SEMA6AQ9H2E6 1030 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 ZNF665Q9H7R5 613 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 UBE2ZQ9H832 354 aaPredicted RBP2.51□□□□□ -2.01
PSPC1-208ENST00000635562 NT5DC2Q9H857 520 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 TMEM138Q9NPI0 162 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 TIGARQ9NQ88 270 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 SPANXB1Q9NS25 103 aaPredicted RBP2.51□□□□□ -2.01
PSPC1-208ENST00000635562 FAIMQ9NVQ4 179 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 SLC25A37Q9NYZ2 338 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 IL17CQ9P0M4 197 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 GSKIPQ9P0R6 139 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 VPREB3Q9UKI3 123 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 POMT2Q9UKY4 750 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 HHLA2Q9UM44 414 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 UBQLN1Q9UMX0 589 aaKnown RBP2.51□□□□□ -2.01
PSPC1-208ENST00000635562 RCL1Q9Y2P8 373 aaKnown RBP2.51□□□□□ -2.01
PSPC1-208ENST00000635562 MRPS18CQ9Y3D5 142 aaKnown RBP2.51□□□□□ -2.01
PSPC1-208ENST00000635562 FAM135AQ9P2D6 1515 aa2.51□□□□□ -2.01
PSPC1-208ENST00000635562 DOCK7Q96N67 2140 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 WNK3Q9BYP7 1800 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 KIR2DS1A0A191URI9 304 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 A0A1B0GU03 582 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 C9orf170A2RU37 121 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 OR6C6A6NF89 314 aa2.5□□□□□ -2.01
PSPC1-208ENST00000635562 SMIM9A6NGZ8 99 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms