RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 ZNF474Q6S9Z5 364 aaPredicted RBP12.7□□□□□ -0.38
LINC00339-208ENST00000634934 CCBE1Q6UXH8 406 aaPredicted RBP12.7□□□□□ -0.38
LINC00339-208ENST00000634934 BEND4Q6ZU67 534 aa12.7□□□□□ -0.38
LINC00339-208ENST00000634934 GDPD3Q7L5L3 318 aa12.7□□□□□ -0.38
LINC00339-208ENST00000634934 MRGPRGQ86SM5 289 aa12.7□□□□□ -0.38
LINC00339-208ENST00000634934 GDPD1Q8N9F7 314 aa12.7□□□□□ -0.38
LINC00339-208ENST00000634934 OR6K6Q8NGW6 343 aa12.7□□□□□ -0.38
LINC00339-208ENST00000634934 CA5BP1Q8WTZ4 195 aa12.7□□□□□ -0.38
LINC00339-208ENST00000634934 SLC25A46Q96AG3 418 aa12.7□□□□□ -0.38
LINC00339-208ENST00000634934 ZNF582Q96NG8 517 aaPredicted RBP12.7□□□□□ -0.38
LINC00339-208ENST00000634934 SEC61A2Q9H9S3 476 aa12.7□□□□□ -0.38
LINC00339-208ENST00000634934 SSR3Q9UNL2 185 aa12.7□□□□□ -0.38
LINC00339-208ENST00000634934 EXOSC1Q9Y3B2 195 aaKnown RBP12.7□□□□□ -0.38
LINC00339-208ENST00000634934 FREM1Q5H8C1 2179 aa12.69□□□□□ -0.38
LINC00339-208ENST00000634934 IGLV1-36A0A0B4J1U3 117 aa12.69□□□□□ -0.38
LINC00339-208ENST00000634934 A8MXE2 369 aa12.69□□□□□ -0.38
LINC00339-208ENST00000634934 RPL36A-HNRNPH2H7BZ11 118 aa12.69□□□□□ -0.38
LINC00339-208ENST00000634934 PRODHO43272 600 aa12.69□□□□□ -0.38
LINC00339-208ENST00000634934 GPANK1O95872 356 aa12.69□□□□□ -0.38
LINC00339-208ENST00000634934 HLA-DQA2P01906 255 aa12.69□□□□□ -0.38
LINC00339-208ENST00000634934 CFL1P23528 166 aaKnown RBP12.69□□□□□ -0.38
LINC00339-208ENST00000634934 MPGP29372 298 aa12.69□□□□□ -0.38
LINC00339-208ENST00000634934 CDAP32320 146 aa12.69□□□□□ -0.38
LINC00339-208ENST00000634934 GUCA1AP43080 201 aaPredicted RBP12.69□□□□□ -0.38
LINC00339-208ENST00000634934 ZNF133P52736 654 aaPredicted RBP12.69□□□□□ -0.38
LINC00339-208ENST00000634934 ARF1P84077 181 aaKnown RBP12.69□□□□□ -0.38
LINC00339-208ENST00000634934 KCNJ8Q15842 424 aa12.69□□□□□ -0.38
LINC00339-208ENST00000634934 AADACL4Q5VUY2 407 aa12.69□□□□□ -0.38
LINC00339-208ENST00000634934 NXNL2Q5VZ03 156 aa12.69□□□□□ -0.38
LINC00339-208ENST00000634934 METAP1DQ6UB28 335 aaPredicted RBP12.69□□□□□ -0.38
LINC00339-208ENST00000634934 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.69□□□□□ -0.38
LINC00339-208ENST00000634934 SNX29P2Q8IUI4 249 aa12.69□□□□□ -0.38
LINC00339-208ENST00000634934 GID4Q8IVV7 300 aa12.69□□□□□ -0.38
LINC00339-208ENST00000634934 PHC2Q8IXK0 858 aa12.69□□□□□ -0.38
LINC00339-208ENST00000634934 ZNRF4Q8WWF5 429 aa12.69□□□□□ -0.38
LINC00339-208ENST00000634934 CEP19Q96LK0 163 aa12.69□□□□□ -0.38
LINC00339-208ENST00000634934 TRAF4Q9BUZ4 470 aaPredicted RBP12.69□□□□□ -0.38
LINC00339-208ENST00000634934 V9GYH0 126 aa12.69□□□□□ -0.38
LINC00339-208ENST00000634934 MYL12BO14950 172 aa12.68□□□□□ -0.38
LINC00339-208ENST00000634934 LYZL6O75951 148 aa12.68□□□□□ -0.38
LINC00339-208ENST00000634934 ITGA5P08648 1049 aa12.68□□□□□ -0.38
LINC00339-208ENST00000634934 IGHV1-2P23083 117 aa12.68□□□□□ -0.38
LINC00339-208ENST00000634934 CDH11P55287 796 aa12.68□□□□□ -0.38
LINC00339-208ENST00000634934 TPTEP56180 551 aa12.68□□□□□ -0.38
LINC00339-208ENST00000634934 GLO1Q04760 184 aa12.68□□□□□ -0.38
LINC00339-208ENST00000634934 ASAH1Q13510 395 aa12.68□□□□□ -0.38
LINC00339-208ENST00000634934 GPR50Q13585 617 aa12.68□□□□□ -0.38
LINC00339-208ENST00000634934 RIN1Q13671 783 aa12.68□□□□□ -0.38
LINC00339-208ENST00000634934 SGCAQ16586 387 aa12.68□□□□□ -0.38
LINC00339-208ENST00000634934 SLC25A35Q3KQZ1 300 aa12.68□□□□□ -0.38
LINC00339-208ENST00000634934 XKRXQ6PP77 449 aa12.68□□□□□ -0.38
LINC00339-208ENST00000634934 B3GLCTQ6Y288 498 aa12.68□□□□□ -0.38
LINC00339-208ENST00000634934 TMPRSS11AQ6ZMR5 421 aa12.68□□□□□ -0.38
LINC00339-208ENST00000634934 MEPCEQ7L2J0 689 aaKnown RBP12.68□□□□□ -0.38
LINC00339-208ENST00000634934 CXorf67Q86X51 503 aaPredicted RBP12.68□□□□□ -0.38
LINC00339-208ENST00000634934 GLB1L2Q8IW92 636 aa12.68□□□□□ -0.38
LINC00339-208ENST00000634934 GABRG1Q8N1C3 465 aa12.68□□□□□ -0.38
LINC00339-208ENST00000634934 LILRB4Q8NHJ6 448 aa12.68□□□□□ -0.38
LINC00339-208ENST00000634934 AP3S1Q92572 193 aa12.68□□□□□ -0.38
LINC00339-208ENST00000634934 HTRA1Q92743 480 aa12.68□□□□□ -0.38
LINC00339-208ENST00000634934 ZMYND19Q96E35 227 aaPredicted RBP12.68□□□□□ -0.38
LINC00339-208ENST00000634934 TAS2R16Q9NYV7 291 aa12.68□□□□□ -0.38
LINC00339-208ENST00000634934 DIDO1Q9BTC0 2240 aaKnown RBP12.68□□□□□ -0.38
LINC00339-208ENST00000634934 CIB4A0PJX0 185 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 NKX2-6A6NCS4 301 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 TVP23AA6NH52 213 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 GLCEO94923 617 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 MPZL1O95297 269 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 HLA-DQB1P01920 261 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 HSMCR30P0CW71 290 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 B4GALT1P15291 398 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 SLC2A5P22732 501 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 LAP3P28838 519 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 RPS19P39019 145 aaKnown RBP12.67□□□□□ -0.38
LINC00339-208ENST00000634934 WNT4P56705 351 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 BDH1Q02338 343 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 TGFBR3Q03167 851 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 P2RY6Q15077 328 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 TSC22D1Q15714 1073 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 LCN1P1Q5VSP4 162 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 OTPQ5XKR4 325 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 LYPD4Q6UWN0 246 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 ZNF813Q6ZN06 617 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 ZNF511Q8NB15 262 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 OR52I1Q8NGK6 324 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 RFKQ969G6 155 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 TEAD3Q99594 435 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 FOXB1Q99853 325 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 SRRQ9GZT4 340 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 JKAMPQ9P055 326 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 MOKQ9UQ07 419 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 A0A096LPE4 126 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 A0A1W2PPZ6 126 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 CCDC182A6NF36 153 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 SLC22A31A6NKX4 558 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 RAD51DO75771 328 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 S100A1P23297 94 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 HTR1FP30939 366 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 GABRA5P31644 462 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 ASCL1P50553 236 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms