RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 MX1P20591 662 aa1.39□□□□□ -2.19
SRP54-214ENST00000630962 ZNF235Q14590 738 aa1.39□□□□□ -2.19
SRP54-214ENST00000630962 MAD2L1BPQ15013 274 aaPredicted RBP1.39□□□□□ -2.19
SRP54-214ENST00000630962 PMF1Q6P1K2 205 aa1.39□□□□□ -2.19
SRP54-214ENST00000630962 ZSCAN30Q86W11 494 aa1.39□□□□□ -2.19
SRP54-214ENST00000630962 EGFL6Q8IUX8 553 aa1.39□□□□□ -2.19
SRP54-214ENST00000630962 BHLHE23Q8NDY6 225 aa1.39□□□□□ -2.19
SRP54-214ENST00000630962 OR10G6Q8NH81 332 aa1.39□□□□□ -2.19
SRP54-214ENST00000630962 PKNOX2Q96KN3 472 aa1.39□□□□□ -2.19
SRP54-214ENST00000630962 VCX2Q9H322 139 aa1.39□□□□□ -2.19
SRP54-214ENST00000630962 DHCR7Q9UBM7 475 aaKnown RBP1.39□□□□□ -2.19
SRP54-214ENST00000630962 SDK2Q58EX2 2172 aa1.38□□□□□ -2.19
SRP54-214ENST00000630962 SHANK1Q9Y566 2161 aa1.38□□□□□ -2.19
SRP54-214ENST00000630962 GLYATL1P3A0A0U1RQE8 302 aa1.38□□□□□ -2.19
SRP54-214ENST00000630962 PPP1R2P9O14990 202 aa1.38□□□□□ -2.19
SRP54-214ENST00000630962 EIF4E2O60573 245 aaKnown RBP1.38□□□□□ -2.19
SRP54-214ENST00000630962 GUCA1CO95843 209 aa1.38□□□□□ -2.19
SRP54-214ENST00000630962 SERPIND1P05546 499 aa1.38□□□□□ -2.19
SRP54-214ENST00000630962 ERGP11308 486 aa1.38□□□□□ -2.19
SRP54-214ENST00000630962 ETS2P15036 469 aa1.38□□□□□ -2.19
SRP54-214ENST00000630962 IDH2P48735 452 aaKnown RBP1.38□□□□□ -2.19
SRP54-214ENST00000630962 SEC61GP60059 68 aa1.38□□□□□ -2.19
SRP54-214ENST00000630962 RPL23AP62750 156 aaKnown RBP1.38□□□□□ -2.19
SRP54-214ENST00000630962 CDK5Q00535 292 aa1.38□□□□□ -2.19
SRP54-214ENST00000630962 MEF2CQ06413 473 aaPredicted RBP1.38□□□□□ -2.19
SRP54-214ENST00000630962 CTSL3PQ5NE16 218 aa1.38□□□□□ -2.19
SRP54-214ENST00000630962 HCP5Q6MZN7 132 aa1.38□□□□□ -2.19
SRP54-214ENST00000630962 TMEM150AQ86TG1 271 aa1.38□□□□□ -2.19
SRP54-214ENST00000630962 SLC35G3Q8N808 338 aa1.38□□□□□ -2.19
SRP54-214ENST00000630962 COX18Q8N8Q8 333 aa1.38□□□□□ -2.19
SRP54-214ENST00000630962 OR5M1Q8NGP8 315 aa1.38□□□□□ -2.19
SRP54-214ENST00000630962 ZSCAN16Q9H4T2 348 aaPredicted RBP1.38□□□□□ -2.19
SRP54-214ENST00000630962 C8orf17Q9NRJ1 99 aa1.38□□□□□ -2.19
SRP54-214ENST00000630962 C21orf62Q9NYP8 219 aa1.38□□□□□ -2.19
SRP54-214ENST00000630962 ST3GAL6Q9Y274 331 aa1.38□□□□□ -2.19
SRP54-214ENST00000630962 SEC16AO15027 2179 aa1.38□□□□□ -2.19
SRP54-214ENST00000630962 SCN4AP35499 1836 aa1.38□□□□□ -2.19
SRP54-214ENST00000630962 PALLDQ8WX93 1383 aa1.37□□□□□ -2.19
SRP54-214ENST00000630962 IGHV1-3A0A0C4DH29 117 aa1.37□□□□□ -2.19
SRP54-214ENST00000630962 PLIN3O60664 434 aa1.37□□□□□ -2.19
SRP54-214ENST00000630962 MTX2O75431 263 aa1.37□□□□□ -2.19
SRP54-214ENST00000630962 SPAG6O75602 509 aa1.37□□□□□ -2.19
SRP54-214ENST00000630962 DEDDO75618 318 aa1.37□□□□□ -2.19
SRP54-214ENST00000630962 NDUFB10O96000 172 aa1.37□□□□□ -2.19
SRP54-214ENST00000630962 PABPC4LP0CB38 370 aaKnown RBP1.37□□□□□ -2.19
SRP54-214ENST00000630962 GLRA2P23416 452 aa1.37□□□□□ -2.19
SRP54-214ENST00000630962 PRLHRP49683 370 aa1.37□□□□□ -2.19
SRP54-214ENST00000630962 CCNHP51946 323 aaPredicted RBP1.37□□□□□ -2.19
SRP54-214ENST00000630962 AIF1P55008 147 aa1.37□□□□□ -2.19
SRP54-214ENST00000630962 CDKN2DP55273 166 aa1.37□□□□□ -2.19
SRP54-214ENST00000630962 CDH6P55285 790 aa1.37□□□□□ -2.19
SRP54-214ENST00000630962 BIKQ13323 160 aa1.37□□□□□ -2.19
SRP54-214ENST00000630962 OR7A5Q15622 319 aa1.37□□□□□ -2.19
SRP54-214ENST00000630962 RNASE13Q5GAN3 156 aaKnown RBP1.37□□□□□ -2.19
SRP54-214ENST00000630962 TEX30Q5JUR7 227 aa1.37□□□□□ -2.19
SRP54-214ENST00000630962 UBE2UQ5VVX9 321 aa1.37□□□□□ -2.19
SRP54-214ENST00000630962 CERS6Q6ZMG9 384 aa1.37□□□□□ -2.19
SRP54-214ENST00000630962 OR1L6Q8NGR2 347 aa1.37□□□□□ -2.19
SRP54-214ENST00000630962 PLPPR1Q8TBJ4 325 aa1.37□□□□□ -2.19
SRP54-214ENST00000630962 RAB3IL1Q8TBN0 382 aa1.37□□□□□ -2.19
SRP54-214ENST00000630962 COL21A1Q96P44 957 aa1.37□□□□□ -2.19
SRP54-214ENST00000630962 MICU1Q9BPX6 476 aa1.37□□□□□ -2.19
SRP54-214ENST00000630962 FGF23Q9GZV9 251 aaPredicted RBP1.37□□□□□ -2.19
SRP54-214ENST00000630962 CWH43Q9H720 699 aa1.37□□□□□ -2.19
SRP54-214ENST00000630962 SLC38A10Q9HBR0 1119 aa1.37□□□□□ -2.19
SRP54-214ENST00000630962 AKNAQ7Z591 1439 aa1.37□□□□□ -2.19
SRP54-214ENST00000630962 CNTNAP1P78357 1384 aa1.36□□□□□ -2.19
SRP54-214ENST00000630962 USP47Q96K76 1375 aa1.36□□□□□ -2.19
SRP54-214ENST00000630962 IGHV3-49A0A0A0MS15 119 aa1.36□□□□□ -2.19
SRP54-214ENST00000630962 GOLGA6L4A6NEF3 574 aa1.36□□□□□ -2.19
SRP54-214ENST00000630962 LRRIQ3A6PVS8 624 aaPredicted RBP1.36□□□□□ -2.19
SRP54-214ENST00000630962 LYRM9A8MSI8 78 aa1.36□□□□□ -2.19
SRP54-214ENST00000630962 J3QRE1 110 aa1.36□□□□□ -2.19
SRP54-214ENST00000630962 KLHL41O60662 606 aa1.36□□□□□ -2.19
SRP54-214ENST00000630962 CLIC3O95833 236 aa1.36□□□□□ -2.19
SRP54-214ENST00000630962 ZNF250P15622 560 aa1.36□□□□□ -2.19
SRP54-214ENST00000630962 GPX4P36969 197 aaPredicted RBP1.36□□□□□ -2.19
SRP54-214ENST00000630962 TNNT2P45379 298 aaPredicted RBP1.36□□□□□ -2.19
SRP54-214ENST00000630962 IFNAR2P48551 515 aa1.36□□□□□ -2.19
SRP54-214ENST00000630962 CSNK1EP49674 416 aaKnown RBP1.36□□□□□ -2.19
SRP54-214ENST00000630962 PPP1CBP62140 327 aa1.36□□□□□ -2.19
SRP54-214ENST00000630962 RBX1P62877 108 aa1.36□□□□□ -2.19
SRP54-214ENST00000630962 SLC25A11Q02978 314 aaKnown RBP1.36□□□□□ -2.19
SRP54-214ENST00000630962 PPIDQ08752 370 aaKnown RBP1.36□□□□□ -2.19
SRP54-214ENST00000630962 BST2Q10589 180 aaKnown RBP1.36□□□□□ -2.19
SRP54-214ENST00000630962 GK3PQ14409 553 aa1.36□□□□□ -2.19
SRP54-214ENST00000630962 IHHQ14623 411 aa1.36□□□□□ -2.19
SRP54-214ENST00000630962 TAF7Q15545 349 aaPredicted RBP1.36□□□□□ -2.19
SRP54-214ENST00000630962 KRTAP6-3Q3LI67 103 aa1.36□□□□□ -2.19
SRP54-214ENST00000630962 VPS26BQ4G0F5 336 aa1.36□□□□□ -2.19
SRP54-214ENST00000630962 SMARCD3Q6STE5 483 aa1.36□□□□□ -2.19
SRP54-214ENST00000630962 UQCC3Q6UW78 93 aa1.36□□□□□ -2.19
SRP54-214ENST00000630962 C16orf47Q6ZP98 133 aaPredicted RBP1.36□□□□□ -2.19
SRP54-214ENST00000630962 MS4A15Q8N5U1 240 aa1.36□□□□□ -2.19
SRP54-214ENST00000630962 TEX9Q8N6V9 391 aa1.36□□□□□ -2.19
SRP54-214ENST00000630962 OR2L3Q8NG85 312 aa1.36□□□□□ -2.19
SRP54-214ENST00000630962 OR52M1Q8NGK5 317 aa1.36□□□□□ -2.19
SRP54-214ENST00000630962 OR1S2Q8NGQ3 325 aa1.36□□□□□ -2.19
SRP54-214ENST00000630962 ZNF502Q8TBZ5 544 aa1.36□□□□□ -2.19
SRP54-214ENST00000630962 TMEM230Q96A57 120 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms