RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 CCKARP32238 428 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 LHX2P50458 406 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 CLDN15P56746 228 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 COPZ1P61923 177 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 EEF1A1P68104 462 aaKnown RBP4.26□□□□□ -1.73
LINC00550-201ENST00000629293 ACSM1Q08AH1 577 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 SNAPC1Q16533 368 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 TMEM44Q2T9K0 475 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 ARHGAP11BQ3KRB8 267 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 ATAD3BQ5T9A4 648 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 SLC30A6Q6NXT4 461 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 CCBE1Q6UXH8 406 aaPredicted RBP4.26□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF836Q6ZNA1 936 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 MBOAT2Q6ZWT7 520 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 NUP54Q7Z3B4 507 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 MEX3DQ86XN8 651 aaKnown RBP4.26□□□□□ -1.73
LINC00550-201ENST00000629293 LAX1Q8IWV1 398 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 OR52P1PQ8NH57 321 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 PIGXQ8TBF5 258 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF350Q9GZX5 532 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 EXOSC4Q9NPD3 245 aaKnown RBP4.26□□□□□ -1.73
LINC00550-201ENST00000629293 EQTNQ9NQ60 294 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 TMEM140Q9NV12 185 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 NPAP1Q9NZP6 1156 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 CLCF1Q9UBD9 225 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 SSR3Q9UNL2 185 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 EXOGQ9Y2C4 368 aaKnown RBP4.26□□□□□ -1.73
LINC00550-201ENST00000629293 CARD8Q9Y2G2 431 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF337Q9Y3M9 751 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 NOTCH1P46531 2555 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 CENPVL1A0A0U1RR11 272 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 DUXAA6NLW8 204 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 DNPH1O43598 174 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 FCMRO60667 390 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 AQP8O94778 261 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 MYL12AP19105 171 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 GABRA5P31644 462 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 MAP3K8P41279 467 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 MTNR1AP48039 350 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 RFX2P48378 723 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 TGM4P49221 684 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 SUCLG1P53597 346 aaKnown RBP4.26□□□□□ -1.73
LINC00550-201ENST00000629293 CLDN18P56856 261 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 DEFA1P59665 94 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 DEFA3P59666 94 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 RPS25P62851 125 aaKnown RBP4.26□□□□□ -1.73
LINC00550-201ENST00000629293 RAB32Q13637 225 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 STK11Q15831 433 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 PGGHGQ32M88 737 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF628Q5EBL2 1059 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 OR2G6Q5TZ20 316 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF730Q6ZMV8 503 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF704Q6ZNC4 412 aaPredicted RBP4.26□□□□□ -1.73
LINC00550-201ENST00000629293 C16orf62Q7Z3J2 963 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 ATG4DQ86TL0 474 aaPredicted RBP4.26□□□□□ -1.73
LINC00550-201ENST00000629293 NKAIN4Q8IVV8 208 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 PEX5LQ8IYB4 626 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 SAMD14Q8IZD0 417 aaPredicted RBP4.26□□□□□ -1.73
LINC00550-201ENST00000629293 ARIH2OSQ8N7S6 290 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 SLC16A11Q8NCK7 471 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 ATP6V1C2Q8NEY4 427 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 OR9Q1Q8NGQ5 310 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 ADAMTS15Q8TE58 950 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 DUSP19Q8WTR2 217 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 OSTF1Q92882 214 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 CDS1Q92903 461 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 SPSB4Q96A44 273 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 SLC38A2Q96QD8 506 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 SECISBP2Q96T21 854 aaKnown RBP4.26□□□□□ -1.73
LINC00550-201ENST00000629293 PRSS27Q9BQR3 290 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 PRRG3Q9BZD7 231 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 GHITMQ9H3K2 345 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 PIGMQ9H3S5 423 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 PRODH2Q9UF12 536 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 CMAHPQ9Y471 501 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 CDH10Q9Y6N8 788 aa4.26□□□□□ -1.73
LINC00550-201ENST00000629293 NDUFS7O75251 213 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 TOX4O94842 621 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 TBXA2RP21731 343 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 HTR1FP30939 366 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 SRD5A2P31213 254 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 SLC1A3P43003 542 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 SLC9A3P48764 834 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 TPTEP56180 551 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 RGS8P57771 180 aaPredicted RBP4.25□□□□□ -1.73
LINC00550-201ENST00000629293 FXYD6P3P58550 94 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 GPR50Q13585 617 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 DUSP5Q16690 384 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 CLEC12BQ2HXU8 276 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 ZMAT1Q5H9K5 638 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 OR2A2Q6IF42 318 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 KCTD20Q7Z5Y7 419 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 AKAP14Q86UN6 197 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 C7orf57Q8NEG2 295 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 TMEM255BQ8WV15 326 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 SLC41A3Q96GZ6 507 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 ZFP3Q96NJ6 502 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 MCHR1Q99705 422 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 SOSTQ9BQB4 213 aa4.25□□□□□ -1.73
LINC00550-201ENST00000629293 TINAGL1Q9GZM7 467 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms