RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 GPRIN2O60269 458 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 IGHV4-39P01824 125 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 FAM157BP0CG42 384 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 SPI1P17947 270 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 PRKACGP22612 351 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 IGFBP5P24593 272 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 CRISP1P54107 249 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 CLEC12BQ2HXU8 276 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 PCGF3Q3KNV8 242 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 SLC35D3Q5M8T2 416 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 SLC18B1Q6NT16 456 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 RHOUQ7L0Q8 258 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 KRTAP1-3Q8IUG1 177 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 HS3ST5Q8IZT8 346 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 ZNF540Q8NDQ6 660 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 WFDC11Q8NEX6 87 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 LRTOMTQ8WZ04 291 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 SPTSSAQ969W0 71 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 Q96MF0 132 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 PITX2Q99697 317 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 ATF6BQ99941 703 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 VRK1Q99986 396 aaPredicted RBP12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 RHNO1Q9BSD3 238 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 TMUB1Q9BVT8 246 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 LHFPL6Q9Y693 200 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 F8P00451 2351 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 ARFGEF3Q5TH69 2177 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 PLSCR5A0PG75 271 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 GLCEO94923 617 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 MPZL1O95297 269 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 IGHV3-13P01766 116 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 APOC1P02654 83 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 TFP02787 698 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 CCL2P13500 99 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 GGT2P36268 569 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 SLC15A1P46059 708 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 ENTPD1P49961 510 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 PPP1CBP62140 327 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 GABPB1Q06547 395 aaPredicted RBP12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 PCK2Q16822 640 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 NKPD1Q17RQ9 610 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 LCN1P1Q5VSP4 162 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 MBNL2Q5VZF2 373 aaKnown RBP12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 KDM4DQ6B0I6 523 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 SHFQ7M4L6 423 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 PAQR4Q8N4S7 273 aaPredicted RBP12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 OR9Q1Q8NGQ5 310 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 OR6K6Q8NGW6 343 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 ABHD4Q8TB40 342 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 PYDC1Q8WXC3 89 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 APOBEC3DQ96AK3 386 aaPredicted RBP12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 C18orf12Q96KH6 178 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 FOXN4Q96NZ1 517 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 DIRC2Q96SL1 478 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 MRPL37Q9BZE1 423 aaKnown RBP12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 SP140LQ9H930 580 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 DUSP13Q9UII6 198 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 GDF2Q9UK05 429 aaPredicted RBP12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 OAZ3Q9UMX2 235 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 COMMD3-BMI1R4GMX3 469 aa12.04□□□□□ -0.48
SNRPA1-216ENST00000626000 RER1O15258 196 aa12.03□□□□□ -0.48
SNRPA1-216ENST00000626000 SSX4O60224 188 aa12.03□□□□□ -0.48
SNRPA1-216ENST00000626000 SCG5P05408 212 aa12.03□□□□□ -0.48
SNRPA1-216ENST00000626000 IGFBP1P08833 259 aaPredicted RBP12.03□□□□□ -0.48
SNRPA1-216ENST00000626000 SLC25A16P16260 332 aa12.03□□□□□ -0.48
SNRPA1-216ENST00000626000 GSTT1P30711 240 aa12.03□□□□□ -0.48
SNRPA1-216ENST00000626000 PYCR1P32322 319 aa12.03□□□□□ -0.48
SNRPA1-216ENST00000626000 PDLIM4P50479 330 aa12.03□□□□□ -0.48
SNRPA1-216ENST00000626000 DAPP51397 102 aa12.03□□□□□ -0.48
SNRPA1-216ENST00000626000 RAD23AP54725 363 aa12.03□□□□□ -0.48
SNRPA1-216ENST00000626000 TPTEP56180 551 aa12.03□□□□□ -0.48
SNRPA1-216ENST00000626000 MRPS11P82912 194 aaKnown RBP12.03□□□□□ -0.48
SNRPA1-216ENST00000626000 PTGES3Q15185 160 aaKnown RBP12.03□□□□□ -0.48
SNRPA1-216ENST00000626000 SNAPC1Q16533 368 aa12.03□□□□□ -0.48
SNRPA1-216ENST00000626000 CCDC92Q53HC0 331 aaPredicted RBP12.03□□□□□ -0.48
SNRPA1-216ENST00000626000 TMEM154Q6P9G4 183 aa12.03□□□□□ -0.48
SNRPA1-216ENST00000626000 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.03□□□□□ -0.48
SNRPA1-216ENST00000626000 AMIGO2Q86SJ2 522 aa12.03□□□□□ -0.48
SNRPA1-216ENST00000626000 BIVMQ86UB2 503 aa12.03□□□□□ -0.48
SNRPA1-216ENST00000626000 IQCF1Q8N6M8 205 aa12.03□□□□□ -0.48
SNRPA1-216ENST00000626000 ZNF454Q8N9F8 522 aa12.03□□□□□ -0.48
SNRPA1-216ENST00000626000 ICA1LQ8NDH6 482 aa12.03□□□□□ -0.48
SNRPA1-216ENST00000626000 OTULINQ96BN8 352 aa12.03□□□□□ -0.48
SNRPA1-216ENST00000626000 INTS14Q96SY0 518 aa12.03□□□□□ -0.48
SNRPA1-216ENST00000626000 DDX28Q9NUL7 540 aaKnown RBP12.03□□□□□ -0.48
SNRPA1-216ENST00000626000 NKIRAS2Q9NYR9 191 aa12.03□□□□□ -0.48
SNRPA1-216ENST00000626000 CELSR1Q9NYQ6 3014 aa12.02□□□□□ -0.49
SNRPA1-216ENST00000626000 LOC390937A0A1W2PQ73 354 aa12.02□□□□□ -0.49
SNRPA1-216ENST00000626000 TMEM129A0AVI4 362 aa12.02□□□□□ -0.49
SNRPA1-216ENST00000626000 ZNF878C9JN71 531 aa12.02□□□□□ -0.49
SNRPA1-216ENST00000626000 SPARCP09486 303 aa12.02□□□□□ -0.49
SNRPA1-216ENST00000626000 WNT5AP41221 380 aa12.02□□□□□ -0.49
SNRPA1-216ENST00000626000 RIPPLY3P57055 190 aa12.02□□□□□ -0.49
SNRPA1-216ENST00000626000 GRB2P62993 217 aaKnown RBP12.02□□□□□ -0.49
SNRPA1-216ENST00000626000 PPP2R2BQ00005 443 aa12.02□□□□□ -0.49
SNRPA1-216ENST00000626000 MEP1BQ16820 701 aa12.02□□□□□ -0.49
SNRPA1-216ENST00000626000 ACSM5Q6NUN0 579 aa12.02□□□□□ -0.49
SNRPA1-216ENST00000626000 PLBD1Q6P4A8 553 aa12.02□□□□□ -0.49
SNRPA1-216ENST00000626000 DNM1P46Q6ZS02 220 aa12.02□□□□□ -0.49
SNRPA1-216ENST00000626000 RFPL4BQ6ZWI9 263 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms