RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 OR14A16Q8NHC5 309 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 RASD2Q96D21 266 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 SLC17A9Q9BYT1 436 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 RAB18Q9NP72 206 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 UQCC1Q9NVA1 299 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 ZC3H12DA2A288 527 aaKnown RBP8.15□□□□□ -1.1
VCL-206ENST00000623461 CDK2AP1O14519 115 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 CNMDO75829 334 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 GSTP1P09211 210 aaKnown RBP8.15□□□□□ -1.1
VCL-206ENST00000623461 CST2P09228 141 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 ALOX5APP20292 161 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 ZNF684Q5T5D7 378 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 ZFP62Q8NB50 900 aaPredicted RBP8.15□□□□□ -1.1
VCL-206ENST00000623461 SIRT5Q9NXA8 310 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 A0A0B4J203 849 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 MBTPS2O43462 519 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 HRO43593 1189 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 ADAMTS4O75173 837 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 HMGA2P52926 109 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 GRB2P62993 217 aaKnown RBP8.15□□□□□ -1.1
VCL-206ENST00000623461 ZNF90Q03938 601 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 LRRTM1Q86UE6 522 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 OR13C5Q8NGS8 318 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 GOT1L1Q8NHS2 421 aaPredicted RBP8.15□□□□□ -1.1
VCL-206ENST00000623461 FOXN4Q96NZ1 517 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 FGF18O76093 207 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 OLFM2O95897 454 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 CTXN2P0C2S0 81 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 NID1P14543 1247 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 MANEAQ5SRI9 462 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 DEFB132Q7Z7B7 95 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 TTC9BQ8N6N2 239 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 SMIM7Q9BQ49 75 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 SGIP1Q9BQI5 828 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 UCK1Q9HA47 277 aa8.15□□□□□ -1.1
VCL-206ENST00000623461 CLDN34H7C241 214 aa8.15□□□□□ -1.11
VCL-206ENST00000623461 PLPP1O14494 284 aa8.15□□□□□ -1.11
VCL-206ENST00000623461 ABCD3P28288 659 aa8.15□□□□□ -1.11
VCL-206ENST00000623461 PNLIPRP3Q17RR3 467 aa8.15□□□□□ -1.11
VCL-206ENST00000623461 ZNF385BQ569K4 471 aa8.15□□□□□ -1.11
VCL-206ENST00000623461 OR5M9Q8NGP3 310 aa8.15□□□□□ -1.11
VCL-206ENST00000623461 ACTR3CQ9C0K3 210 aaPredicted RBP8.15□□□□□ -1.11
VCL-206ENST00000623461 SLC23A2Q9UGH3 650 aa8.15□□□□□ -1.11
VCL-206ENST00000623461 ZBTB42B2RXF5 422 aa8.15□□□□□ -1.11
VCL-206ENST00000623461 H7C1C5 153 aa8.15□□□□□ -1.11
VCL-206ENST00000623461 PSMB5P28074 263 aa8.15□□□□□ -1.11
VCL-206ENST00000623461 IFITM2Q01629 132 aa8.15□□□□□ -1.11
VCL-206ENST00000623461 POU3F1Q03052 451 aaPredicted RBP8.15□□□□□ -1.11
VCL-206ENST00000623461 MIDNQ504T8 468 aa8.15□□□□□ -1.11
VCL-206ENST00000623461 FAM69BQ5VUD6 431 aa8.15□□□□□ -1.11
VCL-206ENST00000623461 CD300LDQ6UXZ3 194 aa8.15□□□□□ -1.11
VCL-206ENST00000623461 PRR18Q8N4B5 295 aa8.15□□□□□ -1.11
VCL-206ENST00000623461 FAM24BQ8N5W8 94 aa8.15□□□□□ -1.11
VCL-206ENST00000623461 SLC24A4Q8NFF2 622 aa8.15□□□□□ -1.11
VCL-206ENST00000623461 OR51A2Q8NGJ7 313 aa8.15□□□□□ -1.11
VCL-206ENST00000623461 MTFP1Q9UDX5 166 aa8.15□□□□□ -1.11
VCL-206ENST00000623461 ANKRD20A5PA0PJZ0 165 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 ZNF273Q14593 569 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 C19orf35Q6ZS72 473 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 ZNF275Q9NSD4 429 aaPredicted RBP8.14□□□□□ -1.11
VCL-206ENST00000623461 LAMP3Q9UQV4 416 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 DNAJC25-GNG10A0A024R161 153 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 CCDC187A0A096LP49 1063 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 ANKUB1A6NFN9 424 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 AKR1C3P42330 323 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 VWA2Q5GFL6 755 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 OR2A2Q6IF42 318 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 LMNTD1Q8N9Z9 388 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 GPX8Q8TED1 209 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 IL1F10Q8WWZ1 152 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 DIO2Q92813 273 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 PRO1933Q9H354 126 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 ANKRD61A6NGH8 418 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 SULT2B1O00204 365 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 GPR31O00270 319 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 HIST1H1CP16403 213 aaKnown RBP8.14□□□□□ -1.11
VCL-206ENST00000623461 HRH1P35367 487 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 PHLDA2Q53GA4 152 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 DOK3Q7L591 496 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 ZNF100Q8IYN0 542 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 HLA-CQ95604 372 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 NTNG2Q96CW9 530 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 CASD1Q96PB1 797 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 MACROD1Q9BQ69 325 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 ZNF646O15015 1829 aaPredicted RBP8.14□□□□□ -1.11
VCL-206ENST00000623461 IGHA2P01877 340 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 VIPR2P41587 438 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 DHODHQ02127 395 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 CPEB2Q7Z5Q1 589 aaKnown RBP8.14□□□□□ -1.11
VCL-206ENST00000623461 MUC20Q8N307 709 aaPredicted RBP8.14□□□□□ -1.11
VCL-206ENST00000623461 ARRDC1Q8N5I2 433 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 NECAP1Q8NC96 275 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 OR11H7Q8NGC8 314 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 APOOQ9BUR5 198 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 PLEKHF2Q9H8W4 249 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 KNTC1P50748 2209 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 H3BML4 177 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 OR7C1O76099 320 aaPredicted RBP8.14□□□□□ -1.11
VCL-206ENST00000623461 C1QAP02745 245 aa8.14□□□□□ -1.11
VCL-206ENST00000623461 IFITM3Q01628 133 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms