RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 NXNL2Q5VZ03 156 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 OR1F12Q8NHA8 337 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 ST8SIA4Q92187 359 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 HINT3Q9NQE9 182 aaKnown RBP8.1□□□□□ -1.11
HDAC9-229ENST00000622668 ABCD2Q9UBJ2 740 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 B9D1Q9UPM9 204 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 FLNBO75369 2602 aaKnown RBP8.1□□□□□ -1.11
HDAC9-229ENST00000622668 LGALS8O00214 317 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 RER1O15258 196 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 PRB1P04280 392 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 RAB3BP20337 219 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 DAPP51397 102 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 SKP2Q13309 424 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 C4orf17Q53FE4 359 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 PAN3Q58A45 887 aaKnown RBP8.1□□□□□ -1.11
HDAC9-229ENST00000622668 LIPNQ5VXI9 398 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 OR13G1Q8NGZ3 307 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 GPR137Q96N19 417 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 ZNF385AQ96PM9 386 aaKnown RBP8.1□□□□□ -1.11
HDAC9-229ENST00000622668 TEAD3Q99594 435 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 YTHDF1Q9BYJ9 559 aaKnown RBP8.1□□□□□ -1.11
HDAC9-229ENST00000622668 NELFAQ9H3P2 528 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 SIRT5Q9NXA8 310 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 POLDIP2Q9Y2S7 368 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 H7C2Y5 167 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 XRCC2O43543 280 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 CD79BP40259 229 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 HCCSP53701 268 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 PRSS12P56730 875 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 FXYD4P59646 89 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 SMN1Q16637 294 aaKnown RBP8.09□□□□□ -1.11
HDAC9-229ENST00000622668 TMEM69Q5SWH9 247 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 PEAR1Q5VY43 1037 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-229ENST00000622668 ZNF584Q8IVC4 421 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 FAM57AQ8TBR7 257 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 TOMM40LQ969M1 308 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 PLPPR2Q96GM1 343 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 SF3B5Q9BWJ5 86 aaKnown RBP8.09□□□□□ -1.11
HDAC9-229ENST00000622668 BARHL1Q9BZE3 327 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 SAP30LQ9HAJ7 183 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 GPR84Q9NQS5 396 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 KCNG2Q9UJ96 466 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 SMAD9O15198 467 aaKnown RBP8.09□□□□□ -1.11
HDAC9-229ENST00000622668 IGKV1D-16P01601 117 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 ZNF17P17021 662 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 HNF1AP20823 631 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 PITPNAQ00169 270 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 USP43Q70EL4 1123 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 ZNF367Q7RTV3 350 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 SLC16A9Q7RTY1 509 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 DPPA2Q7Z7J5 298 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 EGFL6Q8IUX8 553 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 BMPERQ8N8U9 685 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 OR6K3Q8NGY3 331 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 FAM131CQ96AQ9 280 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 ZNF764Q96H86 408 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-229ENST00000622668 MNTQ99583 582 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 ASCL3Q9NQ33 180 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 CMC2Q9NRP2 79 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 MAN2C1Q9NTJ4 1040 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 TBCCD1Q9NVR7 557 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 C14orf166Q9Y224 244 aaKnown RBP8.09□□□□□ -1.11
HDAC9-229ENST00000622668 MSTNO14793 375 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 RGS9O75916 674 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-229ENST00000622668 AQP8O94778 261 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 GSTT2BP0CG30 244 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 CD53P19397 219 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 FAM27E3Q08E93 113 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 P2RY14Q15391 338 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 ACSM5Q6NUN0 579 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 XKRXQ6PP77 449 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 PLET1Q6UQ28 207 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 ZNF782Q6ZMW2 699 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-229ENST00000622668 REEP6Q96HR9 211 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 OR10A4Q9H209 315 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 RNF115Q9Y4L5 304 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 NAV2Q8IVL1 2488 aa8.09□□□□□ -1.11
HDAC9-229ENST00000622668 TRAV18A0A075B6X5 111 aa8.09□□□□□ -1.12
HDAC9-229ENST00000622668 NKX2-6A6NCS4 301 aa8.09□□□□□ -1.12
HDAC9-229ENST00000622668 ZNF732B4DXR9 585 aa8.09□□□□□ -1.12
HDAC9-229ENST00000622668 C3orf80F5H4A9 247 aa8.09□□□□□ -1.12
HDAC9-229ENST00000622668 SMPD2O60906 423 aa8.09□□□□□ -1.12
HDAC9-229ENST00000622668 PTPN6P29350 595 aa8.09□□□□□ -1.12
HDAC9-229ENST00000622668 BMXP51813 675 aa8.09□□□□□ -1.12
HDAC9-229ENST00000622668 AKR1C2P52895 323 aa8.09□□□□□ -1.12
HDAC9-229ENST00000622668 CBLBQ13191 982 aa8.09□□□□□ -1.12
HDAC9-229ENST00000622668 CDK5R2Q13319 367 aa8.09□□□□□ -1.12
HDAC9-229ENST00000622668 ARL6IP1Q15041 203 aa8.09□□□□□ -1.12
HDAC9-229ENST00000622668 GPR32P1Q8NGA4 272 aa8.09□□□□□ -1.12
HDAC9-229ENST00000622668 ADIPOR1Q96A54 375 aa8.09□□□□□ -1.12
HDAC9-229ENST00000622668 SFXN3Q9BWM7 321 aa8.09□□□□□ -1.12
HDAC9-229ENST00000622668 ACOT13Q9NPJ3 140 aa8.09□□□□□ -1.12
HDAC9-229ENST00000622668 SLC7A10Q9NS82 523 aa8.09□□□□□ -1.12
HDAC9-229ENST00000622668 HIF3AQ9Y2N7 669 aa8.09□□□□□ -1.12
HDAC9-229ENST00000622668 FRMPD3Q5JV73 1810 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 NLRC5Q86WI3 1866 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 IGLV3-12A0A075B6K2 115 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 MEX3AA1L020 520 aaKnown RBP8.08□□□□□ -1.12
HDAC9-229ENST00000622668 C17orf51A8MQB3 221 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 H3BNX3 289 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms