RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 PTCRAQ6ISU1 281 aaPredicted RBP8.41□□□□□ -1.06
PDPN-212ENST00000621990 FTMTQ8N4E7 242 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 TMEM229BQ8NBD8 167 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 OR51A2Q8NGJ7 313 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 SAP25Q8TEE9 199 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 FOXRED1Q96CU9 486 aaPredicted RBP8.41□□□□□ -1.06
PDPN-212ENST00000621990 GINS4Q9BRT9 223 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 RARRES3Q9UL19 164 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 WIF1Q9Y5W5 379 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 OR6C65A6NJZ3 312 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 TNFRSF10AO00220 468 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 ZFAND5O76080 213 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 IFNA7P01567 189 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 ITGB2P05107 769 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 GTF2F2P13984 249 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 CCL7P80098 99 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 MYBPHQ13203 477 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 THEM4Q5T1C6 240 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 ZNF529Q6P280 563 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 ZNF813Q6ZN06 617 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 RHOUQ7L0Q8 258 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 LINC00346Q8IVM7 164 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 OR51S1Q8NGJ8 323 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 ASB13Q8WXK3 278 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 RBP7Q96R05 134 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 KLRF1Q9NZS2 232 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 PPP4R1LQ9P1A2 415 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 ASCC3Q8N3C0 2202 aaKnown RBP8.41□□□□□ -1.06
PDPN-212ENST00000621990 TOXO94900 526 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 CD74P04233 296 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 CD3DP04234 171 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 SSTR2P30874 369 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 DNASE1L1P49184 302 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 TAS2R19P59542 299 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 PSMA6P60900 246 aaKnown RBP8.4□□□□□ -1.06
PDPN-212ENST00000621990 TSPAN5P62079 268 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 EXOSC2Q13868 293 aaKnown RBP8.4□□□□□ -1.06
PDPN-212ENST00000621990 MPPED2Q15777 294 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 CLLU1Q5K131 121 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 STEAP1BQ6NZ63 245 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 MRPL14Q6P1L8 145 aaKnown RBP8.4□□□□□ -1.06
PDPN-212ENST00000621990 LRFN4Q6PJG9 635 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 ELMOD2Q8IZ81 293 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 GABRG1Q8N1C3 465 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 OR10G3Q8NGC4 313 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 OR10S1Q8NGN2 331 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 C11orf40Q8WZ69 217 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 HLA-CQ95604 372 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 PNPLA2Q96AD5 504 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 CMKLR1Q99788 373 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 CLEC4MQ9H2X3 399 aaPredicted RBP8.4□□□□□ -1.06
PDPN-212ENST00000621990 APMAPQ9HDC9 416 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 MYOZ1Q9NP98 299 aaPredicted RBP8.4□□□□□ -1.06
PDPN-212ENST00000621990 SDHAF3Q9NRP4 125 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 LOC101059948A0A1B0GTJ6 334 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 RGS11O94810 467 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 TTRP02766 147 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 H2BFMP0C1H6 154 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 ACSM4P0C7M7 580 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 PGA4P0DJD7 388 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 PGA3P0DJD8 388 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 HOXA6P31267 233 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 BIDP55957 195 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 GRK1Q15835 563 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 C3orf33Q6P1S2 294 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 FADS6Q8N9I5 356 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 OR2M3Q8NG83 312 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 SLAMF6Q96DU3 332 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 CCDC74BQ96LY2 380 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 C5orf34Q96MH7 638 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 CITED4Q96RK1 184 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 DPCDQ9BVM2 203 aaPredicted RBP8.4□□□□□ -1.06
PDPN-212ENST00000621990 CGGBP1Q9UFW8 167 aaPredicted RBP8.4□□□□□ -1.06
PDPN-212ENST00000621990 OPN4Q9UHM6 478 aa8.4□□□□□ -1.06
PDPN-212ENST00000621990 LOC102725191A0A1B0GVB3 256 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 UBE2QL1A1L167 161 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 SHISA8B8ZZ34 492 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 H3BML4 177 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 SIGLEC6O43699 453 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 LMX1BO60663 402 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 OR2J2O76002 312 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 CXCL2P19875 107 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 C4BPBP20851 252 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 LAP3P28838 519 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 HSD11B1P28845 292 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 H2BFSP57053 126 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 QRFPP83859 136 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 HIST3H3Q16695 136 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 LYSMD4Q5XG99 296 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 LCN10Q6JVE6 187 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 CORO6Q6QEF8 472 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 OR4D6Q8NGJ1 314 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 OR52B4Q8NGK2 314 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 SLC22A8Q8TCC7 542 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 AQP3Q92482 292 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 PMEPA1Q969W9 287 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 RELTQ969Z4 430 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 SLC25A21Q9BQT8 299 aaPredicted RBP8.39□□□□□ -1.07
PDPN-212ENST00000621990 UQCC2Q9BRT2 126 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 CRB3Q9BUF7 120 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms