RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 AADACL4Q5VUY2 407 aa12.33□□□□□ -0.43
CBWD3-217ENST00000621474 VHLLQ6RSH7 139 aa12.33□□□□□ -0.43
CBWD3-217ENST00000621474 ALDH16A1Q8IZ83 802 aa12.33□□□□□ -0.43
CBWD3-217ENST00000621474 GJC3Q8NFK1 279 aa12.33□□□□□ -0.43
CBWD3-217ENST00000621474 OR10H5Q8NGA6 315 aa12.33□□□□□ -0.43
CBWD3-217ENST00000621474 TMEM163Q8TC26 289 aa12.33□□□□□ -0.43
CBWD3-217ENST00000621474 UBE2FQ969M7 185 aa12.33□□□□□ -0.43
CBWD3-217ENST00000621474 MBD6Q96DN6 1003 aa12.33□□□□□ -0.43
CBWD3-217ENST00000621474 ZMYND19Q96E35 227 aaPredicted RBP12.33□□□□□ -0.43
CBWD3-217ENST00000621474 PLEKHA8Q96JA3 519 aa12.33□□□□□ -0.43
CBWD3-217ENST00000621474 IL4I1Q96RQ9 567 aa12.33□□□□□ -0.43
CBWD3-217ENST00000621474 TEX12Q9BXU0 123 aa12.33□□□□□ -0.43
CBWD3-217ENST00000621474 DCLRE1BQ9H816 532 aa12.33□□□□□ -0.43
CBWD3-217ENST00000621474 NDRG4Q9ULP0 352 aaKnown RBP12.33□□□□□ -0.43
CBWD3-217ENST00000621474 SMPD2O60906 423 aa12.33□□□□□ -0.44
CBWD3-217ENST00000621474 FAM157BP0CG42 384 aa12.33□□□□□ -0.44
CBWD3-217ENST00000621474 CCNOP22674 350 aa12.33□□□□□ -0.44
CBWD3-217ENST00000621474 PCSK6P29122 969 aa12.33□□□□□ -0.44
CBWD3-217ENST00000621474 GLRXP35754 106 aa12.33□□□□□ -0.44
CBWD3-217ENST00000621474 HTR5AP47898 357 aa12.33□□□□□ -0.44
CBWD3-217ENST00000621474 RAD23AP54725 363 aa12.33□□□□□ -0.44
CBWD3-217ENST00000621474 APOFQ13790 326 aa12.33□□□□□ -0.44
CBWD3-217ENST00000621474 SWI5Q1ZZU3 235 aa12.33□□□□□ -0.44
CBWD3-217ENST00000621474 DEFB113Q30KQ7 82 aa12.33□□□□□ -0.44
CBWD3-217ENST00000621474 KLHL12Q53G59 568 aa12.33□□□□□ -0.44
CBWD3-217ENST00000621474 SLC35D3Q5M8T2 416 aa12.33□□□□□ -0.44
CBWD3-217ENST00000621474 ELFN2Q5R3F8 820 aa12.33□□□□□ -0.44
CBWD3-217ENST00000621474 OGFRL1Q5TC84 451 aaPredicted RBP12.33□□□□□ -0.44
CBWD3-217ENST00000621474 OR1F12Q8NHA8 337 aa12.33□□□□□ -0.44
CBWD3-217ENST00000621474 ST7LQ8TDW4 575 aa12.33□□□□□ -0.44
CBWD3-217ENST00000621474 PITX2Q99697 317 aa12.33□□□□□ -0.44
CBWD3-217ENST00000621474 PRRG3Q9BZD7 231 aa12.33□□□□□ -0.44
CBWD3-217ENST00000621474 ATPIF1Q9UII2 106 aa12.33□□□□□ -0.44
CBWD3-217ENST00000621474 KCNG2Q9UJ96 466 aa12.33□□□□□ -0.44
CBWD3-217ENST00000621474 CELSR1Q9NYQ6 3014 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 TMEM129A0AVI4 362 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 ZNF593O00488 134 aaPredicted RBP12.32□□□□□ -0.44
CBWD3-217ENST00000621474 SELENOFO60613 162 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 NGFP01138 241 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 OR4A8P0C604 315 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 ZNF823P16415 610 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 ANOS1P23352 680 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 DNASE1P24855 282 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 GSTT1P30711 240 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 GDI2P50395 445 aaKnown RBP12.32□□□□□ -0.44
CBWD3-217ENST00000621474 FABP6P51161 128 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 BLVRAP53004 296 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 UCP2P55851 309 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 GALK2Q01415 458 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 TMEM255AQ5JRV8 349 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 NXNL2Q5VZ03 156 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 RFPL4BQ6ZWI9 263 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 DPY19L4Q7Z388 723 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 DCXRQ7Z4W1 244 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 ERI1Q8IV48 349 aaKnown RBP12.32□□□□□ -0.44
CBWD3-217ENST00000621474 OR1J2Q8NGS2 313 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 PIGTQ969N2 578 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 INTS14Q96SY0 518 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 AMELYQ99218 206 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 TEAD3Q99594 435 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 CDADC1Q9BWV3 514 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 HDHD2Q9H0R4 259 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 OR51B6Q9H340 312 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 CDH20Q9HBT6 801 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 CBLN4Q9NTU7 201 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 FAIMQ9NVQ4 179 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 ORC6Q9Y5N6 252 aa12.32□□□□□ -0.44
CBWD3-217ENST00000621474 SPARCP09486 303 aa12.31□□□□□ -0.44
CBWD3-217ENST00000621474 CDKN1AP38936 164 aa12.31□□□□□ -0.44
CBWD3-217ENST00000621474 TMEM154Q6P9G4 183 aa12.31□□□□□ -0.44
CBWD3-217ENST00000621474 OR6N2Q8NGY6 317 aa12.31□□□□□ -0.44
CBWD3-217ENST00000621474 FAM81AQ8TBF8 368 aa12.31□□□□□ -0.44
CBWD3-217ENST00000621474 COQ7Q99807 217 aa12.31□□□□□ -0.44
CBWD3-217ENST00000621474 ATF6BQ99941 703 aa12.31□□□□□ -0.44
CBWD3-217ENST00000621474 MRPL37Q9BZE1 423 aaKnown RBP12.31□□□□□ -0.44
CBWD3-217ENST00000621474 DDX28Q9NUL7 540 aaKnown RBP12.31□□□□□ -0.44
CBWD3-217ENST00000621474 SMPD3Q9NY59 655 aaPredicted RBP12.31□□□□□ -0.44
CBWD3-217ENST00000621474 PAX1P15863 534 aa12.3□□□□□ -0.44
CBWD3-217ENST00000621474 GABRB1P18505 474 aa12.3□□□□□ -0.44
CBWD3-217ENST00000621474 OTX1P32242 354 aaPredicted RBP12.3□□□□□ -0.44
CBWD3-217ENST00000621474 SERPINF1P36955 418 aa12.3□□□□□ -0.44
CBWD3-217ENST00000621474 GGTLC2Q14390 218 aa12.3□□□□□ -0.44
CBWD3-217ENST00000621474 TESK1Q15569 626 aa12.3□□□□□ -0.44
CBWD3-217ENST00000621474 EFNB3Q15768 340 aa12.3□□□□□ -0.44
CBWD3-217ENST00000621474 AGAP6Q5VW22 663 aa12.3□□□□□ -0.44
CBWD3-217ENST00000621474 LRP11Q86VZ4 500 aa12.3□□□□□ -0.44
CBWD3-217ENST00000621474 KRTAP1-3Q8IUG1 177 aa12.3□□□□□ -0.44
CBWD3-217ENST00000621474 FBXL14Q8N1E6 418 aa12.3□□□□□ -0.44
CBWD3-217ENST00000621474 GALNT4Q8N4A0 578 aa12.3□□□□□ -0.44
CBWD3-217ENST00000621474 OR8J1Q8NGP2 316 aa12.3□□□□□ -0.44
CBWD3-217ENST00000621474 OR2AJ1Q8NGZ0 328 aa12.3□□□□□ -0.44
CBWD3-217ENST00000621474 MRPL24Q96A35 216 aaKnown RBP12.3□□□□□ -0.44
CBWD3-217ENST00000621474 C4orf45Q96LM5 186 aa12.3□□□□□ -0.44
CBWD3-217ENST00000621474 CXXC4Q9H2H0 198 aa12.3□□□□□ -0.44
CBWD3-217ENST00000621474 PLK3Q9H4B4 646 aa12.3□□□□□ -0.44
CBWD3-217ENST00000621474 RNPEPL1Q9HAU8 725 aa12.3□□□□□ -0.44
CBWD3-217ENST00000621474 ZNF701Q9NV72 531 aaPredicted RBP12.3□□□□□ -0.44
CBWD3-217ENST00000621474 FAM118AQ9NWS6 357 aa12.3□□□□□ -0.44
CBWD3-217ENST00000621474 MYEF2Q9P2K5 600 aaKnown RBP12.3□□□□□ -0.44
CBWD3-217ENST00000621474 SLC16A6O15403 523 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms