RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 FABP4P15090 132 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 TCN2P20062 427 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 EIF1P41567 113 aaKnown RBP6.59□□□□□ -1.35
COLCA1-205ENST00000620864 DPPA4Q7L190 304 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 ERASQ7Z444 233 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 MMP21Q8N119 569 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 PIGCQ92535 297 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 SORT1Q99523 831 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 CDCA4Q9BXL8 241 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 CCDC187A0A096LP49 1063 aa6.59□□□□□ -1.36
COLCA1-205ENST00000620864 A0A0B4J203 849 aa6.59□□□□□ -1.36
COLCA1-205ENST00000620864 A0A1B0GTQ1 180 aa6.59□□□□□ -1.36
COLCA1-205ENST00000620864 B4E171 279 aa6.59□□□□□ -1.36
COLCA1-205ENST00000620864 ABCD4O14678 606 aa6.59□□□□□ -1.36
COLCA1-205ENST00000620864 LGI1O95970 557 aa6.59□□□□□ -1.36
COLCA1-205ENST00000620864 GSTP1P09211 210 aaKnown RBP6.59□□□□□ -1.36
COLCA1-205ENST00000620864 ATXN1LP0C7T5 689 aaKnown RBP6.59□□□□□ -1.36
COLCA1-205ENST00000620864 KIR2DL3P43628 341 aa6.59□□□□□ -1.36
COLCA1-205ENST00000620864 SPINT3P49223 89 aa6.59□□□□□ -1.36
COLCA1-205ENST00000620864 GPM6AP51674 278 aa6.59□□□□□ -1.36
COLCA1-205ENST00000620864 PCBP4P57723 403 aaKnown RBP6.59□□□□□ -1.36
COLCA1-205ENST00000620864 ERHP84090 104 aaKnown RBP6.59□□□□□ -1.36
COLCA1-205ENST00000620864 NHLH1Q02575 133 aa6.59□□□□□ -1.36
COLCA1-205ENST00000620864 NHLH2Q02577 135 aa6.59□□□□□ -1.36
COLCA1-205ENST00000620864 DEFB133Q30KQ1 61 aa6.59□□□□□ -1.36
COLCA1-205ENST00000620864 HLA-BQ31612 363 aa6.59□□□□□ -1.36
COLCA1-205ENST00000620864 RPS26P11Q5JNZ5 115 aaPredicted RBP6.59□□□□□ -1.36
COLCA1-205ENST00000620864 FIGLAQ6QHK4 219 aa6.59□□□□□ -1.36
COLCA1-205ENST00000620864 DYRK2Q92630 601 aa6.59□□□□□ -1.36
COLCA1-205ENST00000620864 ULBP2Q9BZM5 246 aa6.59□□□□□ -1.36
COLCA1-205ENST00000620864 BTAF1O14981 1849 aa6.59□□□□□ -1.36
COLCA1-205ENST00000620864 SERTM2A0A1B0GWG4 89 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 A0A1W2PPQ1 181 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 TMEM218A2RU14 115 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 GABRB1P18505 474 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 SDC1P18827 310 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 PPOXP50336 477 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 SMAGPQ0VAQ4 97 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 OR7A5Q15622 319 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 HAGHQ16775 308 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 PLA1AQ53H76 456 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 KDM4DQ6B0I6 523 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 DHRS4L2Q6PKH6 230 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 RPS27LQ71UM5 84 aaKnown RBP6.58□□□□□ -1.36
COLCA1-205ENST00000620864 COPS9Q8WXC6 57 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 ZNF516Q92618 1163 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 SLCO4A1Q96BD0 722 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 APIPQ96GX9 242 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 ZC3HAV1LQ96H79 300 aaKnown RBP6.58□□□□□ -1.36
COLCA1-205ENST00000620864 DUSP23Q9BVJ7 150 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 KCNK15Q9H427 330 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 TMEM38AQ9H6F2 299 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 BOKQ9UMX3 212 aaPredicted RBP6.58□□□□□ -1.36
COLCA1-205ENST00000620864 OR10J1P30954 320 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 RPL24P83731 157 aaKnown RBP6.58□□□□□ -1.36
COLCA1-205ENST00000620864 TFF2Q03403 129 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 IHHQ14623 411 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 PNLIPRP3Q17RR3 467 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 PLXDC2Q6UX71 529 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 OR10D4PQ8NGN7 298 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 OR5K2Q8NHB8 316 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 OR14A16Q8NHC5 309 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 SAT2Q96F10 170 aaPredicted RBP6.58□□□□□ -1.36
COLCA1-205ENST00000620864 C16orf70Q9BSU1 422 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 BOCQ9BWV1 1114 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 TWSG1Q9GZX9 223 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 RHOFQ9HBH0 211 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 CBLCQ9ULV8 474 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 MYH14Q7Z406 1995 aaKnown RBP6.58□□□□□ -1.36
COLCA1-205ENST00000620864 SFTA3P0C7M3 94 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 MMP11P24347 488 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 RRADP55042 308 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 SHC2P98077 582 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 MAT1AQ00266 395 aaKnown RBP6.58□□□□□ -1.36
COLCA1-205ENST00000620864 SOWAHCQ53LP3 525 aaPredicted RBP6.58□□□□□ -1.36
COLCA1-205ENST00000620864 FAM57BQ71RH2 274 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 DOK3Q7L591 496 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 OR52I1Q8NGK6 324 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 FGF13Q92913 245 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 TAAR6Q96RI8 345 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 GABARAPL1Q9H0R8 117 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 NXF5Q9H1B4 397 aaKnown RBP6.58□□□□□ -1.36
COLCA1-205ENST00000620864 SIRT7Q9NRC8 400 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 HCFC2Q9Y5Z7 792 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 NWD2Q9ULI1 1742 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 A0A0J9YY10 115 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 LINC01553A4QN01 128 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 SMPD2O60906 423 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 CHRM4P08173 479 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 GDF1P27539 372 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 ACAA2P42765 397 aaKnown RBP6.58□□□□□ -1.36
COLCA1-205ENST00000620864 GNG10P50151 68 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 PPP2CAP67775 309 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 MFAP5Q13361 173 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 COL5A1-AS1Q5SY13 56 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 ZNF66Q6ZN08 573 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 CDHR3Q6ZTQ4 885 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 NANOGP1Q8N7R0 232 aa6.58□□□□□ -1.36
COLCA1-205ENST00000620864 MRPL43Q8N983 215 aaKnown RBP6.58□□□□□ -1.36
COLCA1-205ENST00000620864 TP53RKQ96S44 253 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms