RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 GABRA6Q16445 453 aa13.27□□□□□ -0.29
CBWD1-225ENST00000616944 CCDC92Q53HC0 331 aaPredicted RBP13.27□□□□□ -0.29
CBWD1-225ENST00000616944 BEND4Q6ZU67 534 aa13.27□□□□□ -0.29
CBWD1-225ENST00000616944 SLC16A14Q7RTX9 510 aa13.27□□□□□ -0.29
CBWD1-225ENST00000616944 RELL2Q8NC24 303 aaPredicted RBP13.27□□□□□ -0.29
CBWD1-225ENST00000616944 C1orf162Q8NEQ5 155 aaPredicted RBP13.27□□□□□ -0.29
CBWD1-225ENST00000616944 RPS4Y2Q8TD47 263 aa13.27□□□□□ -0.29
CBWD1-225ENST00000616944 YIPF6Q96EC8 236 aa13.27□□□□□ -0.29
CBWD1-225ENST00000616944 MROQ9BYG7 248 aa13.27□□□□□ -0.29
CBWD1-225ENST00000616944 RBM38Q9H0Z9 239 aaKnown RBP13.27□□□□□ -0.29
CBWD1-225ENST00000616944 PIGMQ9H3S5 423 aa13.27□□□□□ -0.29
CBWD1-225ENST00000616944 TRIM36Q9NQ86 728 aa13.27□□□□□ -0.29
CBWD1-225ENST00000616944 BATF3Q9NR55 127 aa13.27□□□□□ -0.29
CBWD1-225ENST00000616944 JKAMPQ9P055 326 aa13.27□□□□□ -0.29
CBWD1-225ENST00000616944 IKZF2Q9UKS7 526 aa13.27□□□□□ -0.29
CBWD1-225ENST00000616944 SIRT4Q9Y6E7 314 aaPredicted RBP13.27□□□□□ -0.29
CBWD1-225ENST00000616944 A8MXE2 369 aa13.26□□□□□ -0.29
CBWD1-225ENST00000616944 ZNF254O75437 659 aa13.26□□□□□ -0.29
CBWD1-225ENST00000616944 SRSF10O75494 262 aaKnown RBP13.26□□□□□ -0.29
CBWD1-225ENST00000616944 LYZL6O75951 148 aa13.26□□□□□ -0.29
CBWD1-225ENST00000616944 CPEP16870 476 aa13.26□□□□□ -0.29
CBWD1-225ENST00000616944 BMP5P22003 454 aa13.26□□□□□ -0.29
CBWD1-225ENST00000616944 RGS6P49758 472 aa13.26□□□□□ -0.29
CBWD1-225ENST00000616944 TGFBR3Q03167 851 aa13.26□□□□□ -0.29
CBWD1-225ENST00000616944 SCRN3Q0VDG4 424 aa13.26□□□□□ -0.29
CBWD1-225ENST00000616944 TBRG1Q3YBR2 411 aa13.26□□□□□ -0.29
CBWD1-225ENST00000616944 HIKESHIQ53FT3 197 aa13.26□□□□□ -0.29
CBWD1-225ENST00000616944 OR7E24Q6IFN5 339 aa13.26□□□□□ -0.29
CBWD1-225ENST00000616944 SPATC1Q76KD6 591 aa13.26□□□□□ -0.29
CBWD1-225ENST00000616944 GPR141Q7Z602 305 aa13.26□□□□□ -0.29
CBWD1-225ENST00000616944 MRGPRGQ86SM5 289 aa13.26□□□□□ -0.29
CBWD1-225ENST00000616944 LIX1LQ8IVB5 337 aa13.26□□□□□ -0.29
CBWD1-225ENST00000616944 GALNT11Q8NCW6 608 aa13.26□□□□□ -0.29
CBWD1-225ENST00000616944 HSD17B8Q92506 261 aa13.26□□□□□ -0.29
CBWD1-225ENST00000616944 RND1Q92730 232 aa13.26□□□□□ -0.29
CBWD1-225ENST00000616944 ELOVL3Q9HB03 270 aa13.26□□□□□ -0.29
CBWD1-225ENST00000616944 ST6GALNAC2Q9UJ37 374 aa13.26□□□□□ -0.29
CBWD1-225ENST00000616944 GRIP1Q9Y3R0 1128 aa13.26□□□□□ -0.29
CBWD1-225ENST00000616944 MYO18BQ8IUG5 2567 aa13.26□□□□□ -0.29
CBWD1-225ENST00000616944 SYNGR3O43761 229 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 TACSTD2P09758 323 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 PATE4P0C8F1 98 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 OTX1P32242 354 aaPredicted RBP13.25□□□□□ -0.29
CBWD1-225ENST00000616944 DCTDP32321 178 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 TGM4P49221 684 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 TAS2R43P59537 309 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 PCBD1P61457 104 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 PSG4Q00888 419 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 TLE1Q04724 770 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 MRPL28Q13084 256 aaKnown RBP13.25□□□□□ -0.29
CBWD1-225ENST00000616944 RAB35Q15286 201 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 TSTQ16762 297 aaKnown RBP13.25□□□□□ -0.29
CBWD1-225ENST00000616944 SLC36A2Q495M3 483 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 CCDC58Q4VC31 144 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 ELFN2Q5R3F8 820 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 DMKNQ6E0U4 476 aaPredicted RBP13.25□□□□□ -0.29
CBWD1-225ENST00000616944 FDX2Q6P4F2 183 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 FAM220AQ7Z4H9 259 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 KRT77Q7Z794 578 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 CXorf67Q86X51 503 aaPredicted RBP13.25□□□□□ -0.29
CBWD1-225ENST00000616944 PHC2Q8IXK0 858 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 YIPF7Q8N8F6 280 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 ZFP41Q8N8Y5 198 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 HAVCR2Q8TDQ0 301 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 OR2H1Q9GZK4 316 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 NOX3Q9HBY0 568 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 NDUFB11Q9NX14 153 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 B3GNT2Q9NY97 397 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 FBXL3Q9UKT7 428 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 SLC5A6Q9Y289 635 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 TIMM10BQ9Y5J6 103 aa13.25□□□□□ -0.29
CBWD1-225ENST00000616944 OR6C6A6NF89 314 aa13.24□□□□□ -0.29
CBWD1-225ENST00000616944 CCRL2O00421 344 aa13.24□□□□□ -0.29
CBWD1-225ENST00000616944 CCL21O00585 134 aa13.24□□□□□ -0.29
CBWD1-225ENST00000616944 DVL2O14641 736 aa13.24□□□□□ -0.29
CBWD1-225ENST00000616944 OGG1O15527 345 aa13.24□□□□□ -0.29
CBWD1-225ENST00000616944 SGCEO43556 437 aa13.24□□□□□ -0.29
CBWD1-225ENST00000616944 PLPP2O43688 288 aa13.24□□□□□ -0.29
CBWD1-225ENST00000616944 RAD51DO75771 328 aa13.24□□□□□ -0.29
CBWD1-225ENST00000616944 HLA-HP01893 362 aa13.24□□□□□ -0.29
CBWD1-225ENST00000616944 CRYGSP22914 178 aa13.24□□□□□ -0.29
CBWD1-225ENST00000616944 PSMB10P40306 273 aa13.24□□□□□ -0.29
CBWD1-225ENST00000616944 RIDAP52758 137 aaKnown RBP13.24□□□□□ -0.29
CBWD1-225ENST00000616944 NANOS3P60323 173 aaKnown RBP13.24□□□□□ -0.29
CBWD1-225ENST00000616944 CDK5R1Q15078 307 aa13.24□□□□□ -0.29
CBWD1-225ENST00000616944 RSPO1Q2MKA7 263 aaPredicted RBP13.24□□□□□ -0.29
CBWD1-225ENST00000616944 SFRP5Q5T4F7 317 aa13.24□□□□□ -0.29
CBWD1-225ENST00000616944 LIPKQ5VXJ0 399 aa13.24□□□□□ -0.29
CBWD1-225ENST00000616944 PGLYRP3Q96LB9 341 aa13.24□□□□□ -0.29
CBWD1-225ENST00000616944 ATF6BQ99941 703 aa13.24□□□□□ -0.29
CBWD1-225ENST00000616944 HDHD2Q9H0R4 259 aa13.24□□□□□ -0.29
CBWD1-225ENST00000616944 WNT5BQ9H1J7 359 aa13.24□□□□□ -0.29
CBWD1-225ENST00000616944 CENPMQ9NSP4 180 aa13.24□□□□□ -0.29
CBWD1-225ENST00000616944 PLEK2Q9NYT0 353 aa13.24□□□□□ -0.29
CBWD1-225ENST00000616944 SF3B6Q9Y3B4 125 aaKnown RBP13.24□□□□□ -0.29
CBWD1-225ENST00000616944 SPTBN1Q01082 2364 aaKnown RBP13.24□□□□□ -0.29
CBWD1-225ENST00000616944 ARPC4-TTLL3A0A0A6YYG9 625 aa13.24□□□□□ -0.29
CBWD1-225ENST00000616944 PNPP00491 289 aa13.24□□□□□ -0.29
CBWD1-225ENST00000616944 H2BFMP0C1H6 154 aa13.24□□□□□ -0.29
CBWD1-225ENST00000616944 CELP19835 753 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms