RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 CXCR6O00574 342 aa17.49■□□□□ 0.39
TRAPPC3-208ENST00000616074 TUBG1P23258 451 aa17.49■□□□□ 0.39
TRAPPC3-208ENST00000616074 BTG1P62324 171 aa17.49■□□□□ 0.39
TRAPPC3-208ENST00000616074 LIPEQ05469 1076 aa17.49■□□□□ 0.39
TRAPPC3-208ENST00000616074 ZMYND11Q15326 602 aa17.49■□□□□ 0.39
TRAPPC3-208ENST00000616074 ARMCX4Q5H9R4 360 aa17.49■□□□□ 0.39
TRAPPC3-208ENST00000616074 C1orf94Q6P1W5 598 aa17.49■□□□□ 0.39
TRAPPC3-208ENST00000616074 ARPINQ7Z6K5 226 aa17.49■□□□□ 0.39
TRAPPC3-208ENST00000616074 LRRC28Q86X40 367 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC3-208ENST00000616074 SIGLECL1Q8N7X8 197 aa17.49■□□□□ 0.39
TRAPPC3-208ENST00000616074 RASD2Q96D21 266 aa17.49■□□□□ 0.39
TRAPPC3-208ENST00000616074 TUBG2Q9NRH3 451 aa17.49■□□□□ 0.39
TRAPPC3-208ENST00000616074 DDX28Q9NUL7 540 aaKnown RBP17.49■□□□□ 0.39
TRAPPC3-208ENST00000616074 ARGLU1Q9NWB6 273 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC3-208ENST00000616074 PLEK2Q9NYT0 353 aa17.49■□□□□ 0.39
TRAPPC3-208ENST00000616074 IL19Q9UHD0 177 aa17.49■□□□□ 0.39
TRAPPC3-208ENST00000616074 AP3M1Q9Y2T2 418 aa17.49■□□□□ 0.39
TRAPPC3-208ENST00000616074 POLR3KQ9Y2Y1 108 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC3-208ENST00000616074 IMPA2O14732 288 aa17.48■□□□□ 0.39
TRAPPC3-208ENST00000616074 WIPF1O43516 503 aa17.48■□□□□ 0.39
TRAPPC3-208ENST00000616074 AHCYL1O43865 530 aa17.48■□□□□ 0.39
TRAPPC3-208ENST00000616074 ZNF12P17014 697 aa17.48■□□□□ 0.39
TRAPPC3-208ENST00000616074 SLC6A9P48067 706 aa17.48■□□□□ 0.39
TRAPPC3-208ENST00000616074 ZNF154Q13106 437 aa17.48■□□□□ 0.39
TRAPPC3-208ENST00000616074 AQP6Q13520 282 aa17.48■□□□□ 0.39
TRAPPC3-208ENST00000616074 KRR1Q13601 381 aaKnown RBP17.48■□□□□ 0.39
TRAPPC3-208ENST00000616074 TUSC1Q2TAM9 212 aa17.48■□□□□ 0.39
TRAPPC3-208ENST00000616074 KLF17Q5JT82 389 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC3-208ENST00000616074 FKBP9P1Q75LS8 142 aa17.48■□□□□ 0.39
TRAPPC3-208ENST00000616074 HAVCR1Q96D42 359 aa17.48■□□□□ 0.39
TRAPPC3-208ENST00000616074 FAM46AQ96IP4 442 aaKnown RBP17.48■□□□□ 0.39
TRAPPC3-208ENST00000616074 OR2V2Q96R30 315 aa17.48■□□□□ 0.39
TRAPPC3-208ENST00000616074 SYT4Q9H2B2 425 aa17.48■□□□□ 0.39
TRAPPC3-208ENST00000616074 ASH2LQ9UBL3 628 aa17.48■□□□□ 0.39
TRAPPC3-208ENST00000616074 ZNF69Q9UC07 566 aa17.48■□□□□ 0.39
TRAPPC3-208ENST00000616074 PPP1R3CQ9UQK1 317 aa17.48■□□□□ 0.39
TRAPPC3-208ENST00000616074 INSIG2Q9Y5U4 225 aa17.48■□□□□ 0.39
TRAPPC3-208ENST00000616074 AUP1Q9Y679 476 aa17.48■□□□□ 0.39
TRAPPC3-208ENST00000616074 PKD1L1Q8TDX9 2849 aa17.48■□□□□ 0.39
TRAPPC3-208ENST00000616074 TRRAPQ9Y4A5 3859 aa17.47■□□□□ 0.39
TRAPPC3-208ENST00000616074 OR6C6A6NF89 314 aa17.47■□□□□ 0.39
TRAPPC3-208ENST00000616074 A8MXK9 166 aa17.47■□□□□ 0.39
TRAPPC3-208ENST00000616074 F5H0A9 414 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC3-208ENST00000616074 NME4O00746 187 aa17.47■□□□□ 0.39
TRAPPC3-208ENST00000616074 SLC22A2O15244 555 aa17.47■□□□□ 0.39
TRAPPC3-208ENST00000616074 SERPINA1P01009 418 aa17.47■□□□□ 0.39
TRAPPC3-208ENST00000616074 CCDC92Q53HC0 331 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC3-208ENST00000616074 TSEN54Q7Z6J9 526 aaKnown RBP17.47■□□□□ 0.39
TRAPPC3-208ENST00000616074 OR5AS1Q8N127 324 aa17.47■□□□□ 0.39
TRAPPC3-208ENST00000616074 SLC7A13Q8TCU3 470 aa17.47■□□□□ 0.39
TRAPPC3-208ENST00000616074 PTP4A1Q93096 173 aa17.47■□□□□ 0.39
TRAPPC3-208ENST00000616074 COG8Q96MW5 612 aa17.47■□□□□ 0.39
TRAPPC3-208ENST00000616074 RERGLQ9H628 205 aa17.47■□□□□ 0.39
TRAPPC3-208ENST00000616074 NMNAT1Q9HAN9 279 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC3-208ENST00000616074 NUP50Q9UKX7 468 aa17.47■□□□□ 0.39
TRAPPC3-208ENST00000616074 COA3Q9Y2R0 106 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC3-208ENST00000616074 GSTA4O15217 222 aa17.46■□□□□ 0.39
TRAPPC3-208ENST00000616074 SURF4O15260 269 aa17.46■□□□□ 0.39
TRAPPC3-208ENST00000616074 SLC16A7O60669 478 aa17.46■□□□□ 0.39
TRAPPC3-208ENST00000616074 DBHP09172 617 aa17.46■□□□□ 0.39
TRAPPC3-208ENST00000616074 MMP16P51512 607 aa17.46■□□□□ 0.39
TRAPPC3-208ENST00000616074 SLC7A2P52569 658 aa17.46■□□□□ 0.39
TRAPPC3-208ENST00000616074 GUCY1A3Q02108 690 aa17.46■□□□□ 0.39
TRAPPC3-208ENST00000616074 RBMS3Q6XE24 437 aaKnown RBP17.46■□□□□ 0.39
TRAPPC3-208ENST00000616074 DOK3Q7L591 496 aa17.46■□□□□ 0.39
TRAPPC3-208ENST00000616074 RRM2BQ7LG56 351 aa17.46■□□□□ 0.39
TRAPPC3-208ENST00000616074 OR1F12Q8NHA8 337 aa17.46■□□□□ 0.39
TRAPPC3-208ENST00000616074 RP9Q8TA86 221 aaKnown RBP17.46■□□□□ 0.39
TRAPPC3-208ENST00000616074 DUX5Q96PT3 197 aa17.46■□□□□ 0.39
TRAPPC3-208ENST00000616074 C1QTNF5Q9BXJ0 243 aa17.46■□□□□ 0.39
TRAPPC3-208ENST00000616074 NDEL1Q9GZM8 345 aa17.46■□□□□ 0.39
TRAPPC3-208ENST00000616074 ANKRD19PQ9H560 264 aa17.46■□□□□ 0.39
TRAPPC3-208ENST00000616074 GCM1Q9NP62 436 aa17.46■□□□□ 0.39
TRAPPC3-208ENST00000616074 NRIP3Q9NQ35 241 aa17.46■□□□□ 0.39
TRAPPC3-208ENST00000616074 PTTG3PQ9NZH4 202 aa17.46■□□□□ 0.39
TRAPPC3-208ENST00000616074 SIGLEC7Q9Y286 467 aa17.46■□□□□ 0.39
TRAPPC3-208ENST00000616074 TMEM5Q9Y2B1 443 aa17.46■□□□□ 0.39
TRAPPC3-208ENST00000616074 PCDHGB1Q9Y5G3 927 aa17.46■□□□□ 0.39
TRAPPC3-208ENST00000616074 TMEM178BH3BS89 294 aa17.45■□□□□ 0.38
TRAPPC3-208ENST00000616074 PTP4A3O75365 173 aa17.45■□□□□ 0.38
TRAPPC3-208ENST00000616074 KHDRBS3O75525 346 aaKnown RBP17.45■□□□□ 0.38
TRAPPC3-208ENST00000616074 NDUFB2O95178 105 aa17.45■□□□□ 0.38
TRAPPC3-208ENST00000616074 HKR1P10072 659 aa17.45■□□□□ 0.38
TRAPPC3-208ENST00000616074 RAC2P15153 192 aa17.45■□□□□ 0.38
TRAPPC3-208ENST00000616074 SDHAP31040 664 aa17.45■□□□□ 0.38
TRAPPC3-208ENST00000616074 MDH2P40926 338 aaKnown RBP17.45■□□□□ 0.38
TRAPPC3-208ENST00000616074 LSM6P62312 80 aaKnown RBP17.45■□□□□ 0.38
TRAPPC3-208ENST00000616074 HLXQ14774 488 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC3-208ENST00000616074 CYP4Z1Q86W10 505 aa17.45■□□□□ 0.38
TRAPPC3-208ENST00000616074 GLB1L2Q8IW92 636 aa17.45■□□□□ 0.38
TRAPPC3-208ENST00000616074 BCL6BQ8N143 479 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC3-208ENST00000616074 C1orf147Q96MC9 270 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC3-208ENST00000616074 GPX7Q96SL4 187 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC3-208ENST00000616074 MRI1Q9BV20 369 aa17.45■□□□□ 0.38
TRAPPC3-208ENST00000616074 VSX1Q9NZR4 365 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC3-208ENST00000616074 IL20RAQ9UHF4 553 aa17.45■□□□□ 0.38
TRAPPC3-208ENST00000616074 ENPP4Q9Y6X5 453 aa17.45■□□□□ 0.38
TRAPPC3-208ENST00000616074 DNAJC9-AS1A6NH13 148 aa17.44■□□□□ 0.38
TRAPPC3-208ENST00000616074 CEACAM18A8MTB9 384 aa17.44■□□□□ 0.38
TRAPPC3-208ENST00000616074 SOCS2O14508 198 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms