RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 DOT1LQ8TEK3 1739 aa17.19■□□□□ 0.34
SPAST-203ENST00000615843 SNCAP37840 140 aa17.19■□□□□ 0.34
SPAST-203ENST00000615843 HABP2Q14520 560 aaPredicted RBP17.19■□□□□ 0.34
SPAST-203ENST00000615843 GCNT2Q8N0V5 402 aa17.19■□□□□ 0.34
SPAST-203ENST00000615843 EXD3Q8N9H8 876 aa17.19■□□□□ 0.34
SPAST-203ENST00000615843 CCNL2Q96S94 520 aaPredicted RBP17.19■□□□□ 0.34
SPAST-203ENST00000615843 TRAF4Q9BUZ4 470 aaPredicted RBP17.19■□□□□ 0.34
SPAST-203ENST00000615843 BCO1Q9HAY6 547 aa17.19■□□□□ 0.34
SPAST-203ENST00000615843 CHRNA9Q9UGM1 479 aa17.19■□□□□ 0.34
SPAST-203ENST00000615843 TRBV5-4A0A0C4DH59 114 aa17.18■□□□□ 0.34
SPAST-203ENST00000615843 MBP02144 154 aa17.18■□□□□ 0.34
SPAST-203ENST00000615843 RPS27P42677 84 aaKnown RBP17.18■□□□□ 0.34
SPAST-203ENST00000615843 PCBP4P57723 403 aaKnown RBP17.18■□□□□ 0.34
SPAST-203ENST00000615843 ABHD17BQ5VST6 288 aa17.18■□□□□ 0.34
SPAST-203ENST00000615843 MAMSTRQ6ZN01 415 aa17.18■□□□□ 0.34
SPAST-203ENST00000615843 MARCH5Q9NX47 278 aa17.18■□□□□ 0.34
SPAST-203ENST00000615843 CST5P28325 142 aaPredicted RBP17.18■□□□□ 0.34
SPAST-203ENST00000615843 CALCRP30988 508 aa17.18■□□□□ 0.34
SPAST-203ENST00000615843 C9orf135Q5VTT2 229 aa17.18■□□□□ 0.34
SPAST-203ENST00000615843 SLC39A5Q6ZMH5 540 aa17.18■□□□□ 0.34
SPAST-203ENST00000615843 H1FNTQ75WM6 255 aaPredicted RBP17.18■□□□□ 0.34
SPAST-203ENST00000615843 TMEM229BQ8NBD8 167 aa17.18■□□□□ 0.34
SPAST-203ENST00000615843 OR8U1Q8NH10 309 aa17.18■□□□□ 0.34
SPAST-203ENST00000615843 OR51E1Q8TCB6 317 aa17.18■□□□□ 0.34
SPAST-203ENST00000615843 GDE1Q9NZC3 331 aa17.18■□□□□ 0.34
SPAST-203ENST00000615843 ZNF346Q9UL40 294 aaKnown RBP17.18■□□□□ 0.34
SPAST-203ENST00000615843 A4GNTQ9UNA3 340 aa17.18■□□□□ 0.34
SPAST-203ENST00000615843 TJP1Q07157 1748 aa17.18■□□□□ 0.34
SPAST-203ENST00000615843 HSPB2A8KAH6 182 aa17.18■□□□□ 0.34
SPAST-203ENST00000615843 HSPB2Q16082 182 aa17.18■□□□□ 0.34
SPAST-203ENST00000615843 OR4A16Q8NH70 328 aa17.18■□□□□ 0.34
SPAST-203ENST00000615843 LINC00052Q96N35 136 aa17.18■□□□□ 0.34
SPAST-203ENST00000615843 OBP2BQ9NPH6 170 aa17.18■□□□□ 0.34
SPAST-203ENST00000615843 TMEM52BQ4KMG9 183 aa17.18■□□□□ 0.34
SPAST-203ENST00000615843 TMEM201Q5SNT2 666 aa17.18■□□□□ 0.34
SPAST-203ENST00000615843 SLC38A9Q8NBW4 561 aa17.18■□□□□ 0.34
SPAST-203ENST00000615843 ZNF485Q8NCK3 441 aa17.18■□□□□ 0.34
SPAST-203ENST00000615843 KCNIP2Q9NS61 270 aa17.18■□□□□ 0.34
SPAST-203ENST00000615843 SLC22A13Q9Y226 551 aa17.18■□□□□ 0.34
SPAST-203ENST00000615843 TMEM184BQ9Y519 407 aaPredicted RBP17.18■□□□□ 0.34
SPAST-203ENST00000615843 AAED1Q7RTV5 226 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 SPICQ8N5J4 248 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 PLEKHF2Q9H8W4 249 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 RNF186Q9NXI6 227 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 FBXO4Q9UKT5 387 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 K7ESM1 405 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 GALP22466 123 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 GDF1P27539 372 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 AGERQ15109 404 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 ZNF628Q5EBL2 1059 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 GJC3Q8NFK1 279 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 AKR7LQ8NHP1 331 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 TMPRSS5Q9H3S3 457 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 MMP26Q9NRE1 261 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 MYOTQ9UBF9 498 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 PRSS23O95084 383 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 IRS1P35568 1242 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 FABP6P51161 128 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 GRINAQ7Z429 371 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 DND1Q8IYX4 353 aaKnown RBP17.17■□□□□ 0.34
SPAST-203ENST00000615843 TVP23CQ96ET8 276 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 LRP5LA4QPB2 252 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 MRPL33O75394 65 aaKnown RBP17.17■□□□□ 0.34
SPAST-203ENST00000615843 ZNF85Q03923 595 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 ENDOGQ14249 297 aaKnown RBP17.17■□□□□ 0.34
SPAST-203ENST00000615843 INSL4Q14641 139 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 ACKR1Q16570 336 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 LTC4SQ16873 150 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 IL22RA1Q8N6P7 574 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 ARIH2OSQ8N7S6 290 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 OR2G2Q8NGZ5 317 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 UBL7Q96S82 380 aaPredicted RBP17.17■□□□□ 0.34
SPAST-203ENST00000615843 HDAC8Q9BY41 377 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 HIPK2Q9H2X6 1198 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 OR51I2Q9H344 312 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 R3HDMLQ9H3Y0 253 aa17.17■□□□□ 0.34
SPAST-203ENST00000615843 LRP3O75074 770 aa17.16■□□□□ 0.34
SPAST-203ENST00000615843 METTL15P1P0C7V9 234 aa17.16■□□□□ 0.34
SPAST-203ENST00000615843 RRASP10301 218 aa17.16■□□□□ 0.34
SPAST-203ENST00000615843 ZNF250P15622 560 aa17.16■□□□□ 0.34
SPAST-203ENST00000615843 IGFBP6P24592 240 aaPredicted RBP17.16■□□□□ 0.34
SPAST-203ENST00000615843 AVPR2P30518 371 aa17.16■□□□□ 0.34
SPAST-203ENST00000615843 IGSF11Q5DX21 431 aa17.16■□□□□ 0.34
SPAST-203ENST00000615843 ELFN2Q5R3F8 820 aa17.16■□□□□ 0.34
SPAST-203ENST00000615843 OR4D10Q8NGI6 311 aa17.16■□□□□ 0.34
SPAST-203ENST00000615843 OR13D1Q8NGV5 346 aa17.16■□□□□ 0.34
SPAST-203ENST00000615843 OR51H1Q8NH63 302 aa17.16■□□□□ 0.34
SPAST-203ENST00000615843 PTRH2Q9Y3E5 179 aaKnown RBP17.16■□□□□ 0.34
SPAST-203ENST00000615843 RGPD5Q99666 1765 aa17.16■□□□□ 0.34
SPAST-203ENST00000615843 PJVKQ0ZLH3 352 aa17.16■□□□□ 0.34
SPAST-203ENST00000615843 HSD17B13Q7Z5P4 300 aaPredicted RBP17.16■□□□□ 0.34
SPAST-203ENST00000615843 ZNF610Q8N9Z0 462 aa17.16■□□□□ 0.34
SPAST-203ENST00000615843 H0Y8G0 127 aa17.16■□□□□ 0.34
SPAST-203ENST00000615843 DRD1P21728 446 aa17.16■□□□□ 0.34
SPAST-203ENST00000615843 FOLR3P41439 243 aa17.16■□□□□ 0.34
SPAST-203ENST00000615843 EEF1A2Q05639 463 aaKnown RBP17.16■□□□□ 0.34
SPAST-203ENST00000615843 FAM209AQ5JX71 171 aa17.16■□□□□ 0.34
SPAST-203ENST00000615843 FGF13Q92913 245 aa17.16■□□□□ 0.34
SPAST-203ENST00000615843 RPUSD4Q96CM3 377 aaKnown RBP17.16■□□□□ 0.34
SPAST-203ENST00000615843 SLAMF6Q96DU3 332 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms