RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 OOSP2Q86WS3 158 aa13.57□□□□□ -0.24
PCDHGB1-202ENST00000611598 CCDC36Q8IYA8 594 aa13.57□□□□□ -0.24
PCDHGB1-202ENST00000611598 PAQR8Q8TEZ7 354 aa13.57□□□□□ -0.24
PCDHGB1-202ENST00000611598 NUDCD2Q8WVJ2 157 aa13.57□□□□□ -0.24
PCDHGB1-202ENST00000611598 THRSPQ92748 146 aa13.57□□□□□ -0.24
PCDHGB1-202ENST00000611598 BADQ92934 168 aa13.57□□□□□ -0.24
PCDHGB1-202ENST00000611598 ADOQ96SZ5 270 aa13.57□□□□□ -0.24
PCDHGB1-202ENST00000611598 CERS4Q9HA82 394 aa13.57□□□□□ -0.24
PCDHGB1-202ENST00000611598 NDRG3Q9UGV2 375 aa13.57□□□□□ -0.24
PCDHGB1-202ENST00000611598 KCNK7Q9Y2U2 307 aa13.57□□□□□ -0.24
PCDHGB1-202ENST00000611598 EMC9Q9Y3B6 208 aa13.57□□□□□ -0.24
PCDHGB1-202ENST00000611598 IGLV1-36A0A0B4J1U3 117 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 TMEM200CA6NKL6 621 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 PGAM2P15259 253 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 HNRNPA2B1P22626 353 aaKnown RBP13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 ZNF117Q03924 483 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 PRTGQ2VWP7 1150 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 PLEKHN1Q494U1 663 aaPredicted RBP13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 RNASE10Q5GAN6 216 aaKnown RBP13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 TMEM240Q5SV17 173 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 TMEM71Q6P5X7 295 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 UQCC3Q6UW78 93 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 TMPPEQ6ZT21 453 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 TRAPPC6BQ86SZ2 158 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 OR5AP2Q8NGF4 316 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 OR13C3Q8NGS6 347 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 THAP6Q8TBB0 222 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 MITD1Q8WV92 249 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 ASB17Q8WXJ9 295 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 MICU1Q9BPX6 476 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 SLCO5A1Q9H2Y9 848 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 CLDN4O14493 209 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 KLF8O95600 359 aaPredicted RBP13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 FSTP19883 344 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 DNASE1L1P49184 302 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 RIDAP52758 137 aaKnown RBP13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 ROM1Q03395 351 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 SCRN3Q0VDG4 424 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 BIKQ13323 160 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 GPM6BQ13491 265 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 CCINQ13939 588 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 Q6ZSR6 202 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 SVBPQ8N300 66 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 C19orf47Q8N9M1 422 aaKnown RBP13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 INO80EQ8NBZ0 244 aaPredicted RBP13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 FAM46BQ96A09 425 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 ZNF587Q96SQ5 575 aaPredicted RBP13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 ADAM19Q9H013 955 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 SEMA6CQ9H3T2 930 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 TMEM231Q9H6L2 316 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 ESRP2Q9H6T0 727 aaKnown RBP13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 FN3KRPQ9HA64 309 aa13.56□□□□□ -0.24
PCDHGB1-202ENST00000611598 LOC107986453A0A1B0GWG9 222 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 RAB19A4D1S5 217 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 C17orf105B2RV13 164 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 C5orf67F2Z3F1 127 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 HCRTR2O43614 444 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 ICOSLGO75144 302 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 STK17BO94768 372 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 AKR1C4P17516 323 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 MAOBP27338 520 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 ZNF519Q8TB69 540 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 MMABQ96EY8 250 aaPredicted RBP13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 GABRG3Q99928 467 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 SELENOIQ9C0D9 397 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 NRSN2Q9GZP1 204 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 CYB5R1Q9UHQ9 305 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 GON4LQ3T8J9 2241 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 CDC14CA4D256 554 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 TNFRSF10CO14798 259 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 IL33O95760 270 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 IL2RAP01589 272 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 ERCC1P07992 297 aaPredicted RBP13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 HRH1P35367 487 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 C1orf61Q13536 156 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 ZNF260Q3ZCT1 412 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 CCDC157Q569K6 752 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 ZNF813Q6ZN06 617 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 SLC22A18ASQ8N1D0 253 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 OR13H1Q8NG92 308 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 AQP3Q92482 292 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 PIK3IP1Q96FE7 263 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 PHB2Q99623 299 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 PRRT1Q99946 306 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 TLNRD1Q9H1K6 362 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 SLC2A8Q9NY64 477 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 GDF2Q9UK05 429 aaPredicted RBP13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 MKL2Q9ULH7 1088 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 RHBDD3Q9Y3P4 386 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 CSAG2Q9Y5P2 127 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 PCNX3Q9H6A9 2034 aa13.55□□□□□ -0.24
PCDHGB1-202ENST00000611598 C13orf42A0A1B0GVH6 325 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 RAB27BO00194 218 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 FGF16O43320 207 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 ZNF208O43345 1280 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 NUDT14O95848 222 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 HLA-GP17693 338 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 PVALBP20472 110 aaPredicted RBP13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 CXCR1P25024 350 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 RPL27P61353 136 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms