RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 OR13C5Q8NGS8 318 aa14.37□□□□□ -0.11
RTN1-209ENST00000611068 OSTF1Q92882 214 aa14.37□□□□□ -0.11
RTN1-209ENST00000611068 PRRC1Q96M27 445 aa14.37□□□□□ -0.11
RTN1-209ENST00000611068 TBX5Q99593 518 aa14.37□□□□□ -0.11
RTN1-209ENST00000611068 ARHGDIGQ99819 225 aa14.37□□□□□ -0.11
RTN1-209ENST00000611068 NRIP2Q9BQI9 281 aa14.37□□□□□ -0.11
RTN1-209ENST00000611068 SMAD9O15198 467 aaKnown RBP14.37□□□□□ -0.11
RTN1-209ENST00000611068 NKX2-2O95096 273 aa14.37□□□□□ -0.11
RTN1-209ENST00000611068 AGR2O95994 175 aa14.37□□□□□ -0.11
RTN1-209ENST00000611068 SNRPCP09234 159 aaKnown RBP14.37□□□□□ -0.11
RTN1-209ENST00000611068 CCL4P13236 92 aa14.37□□□□□ -0.11
RTN1-209ENST00000611068 HIST1H1BP16401 226 aaKnown RBP14.37□□□□□ -0.11
RTN1-209ENST00000611068 ACKR3P25106 362 aa14.37□□□□□ -0.11
RTN1-209ENST00000611068 MAP3K8P41279 467 aa14.37□□□□□ -0.11
RTN1-209ENST00000611068 RAB4BP61018 213 aa14.37□□□□□ -0.11
RTN1-209ENST00000611068 CXADRP78310 365 aa14.37□□□□□ -0.11
RTN1-209ENST00000611068 ZNF813Q6ZN06 617 aa14.37□□□□□ -0.11
RTN1-209ENST00000611068 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.37□□□□□ -0.11
RTN1-209ENST00000611068 PRR18Q8N4B5 295 aa14.37□□□□□ -0.11
RTN1-209ENST00000611068 KCNRGQ8N5I3 272 aa14.37□□□□□ -0.11
RTN1-209ENST00000611068 OR51S1Q8NGJ8 323 aa14.37□□□□□ -0.11
RTN1-209ENST00000611068 RIMS4Q9H426 269 aaPredicted RBP14.37□□□□□ -0.11
RTN1-209ENST00000611068 TMEM138Q9NPI0 162 aa14.37□□□□□ -0.11
RTN1-209ENST00000611068 A0A1W2PPH5 198 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 IRGMA1A4Y4 181 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 BCL2L11O43521 198 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 CLPSP04118 112 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 RLN1P04808 185 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 LSM6P62312 80 aaKnown RBP14.36□□□□□ -0.11
RTN1-209ENST00000611068 IGLV3-21P80748 117 aaPredicted RBP14.36□□□□□ -0.11
RTN1-209ENST00000611068 ADAM5Q6NVV9 412 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 PLBD1Q6P4A8 553 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 UNQ6126/PRO20091Q6UXV3 157 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 GDF7Q7Z4P5 450 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 ZNF615Q8N8J6 731 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 TNFAIP8L1Q8WVP5 186 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 SLC25A38Q96DW6 304 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 STACQ99469 402 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 LAMP5Q9UJQ1 280 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 EP300Q09472 2414 aaPredicted RBP14.36□□□□□ -0.11
RTN1-209ENST00000611068 A0A0D9SG52 128 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 CER1O95813 267 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 MT-ND4LP03901 98 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 PAX6P26367 422 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 ATP6V1E1P36543 226 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 ZNF136P52737 540 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 AP3S2P59780 193 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 NUTF2P61970 127 aaKnown RBP14.36□□□□□ -0.11
RTN1-209ENST00000611068 SSPNQ14714 243 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 OR8G1Q15617 311 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 BCORP1Q8N888 145 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 DNAAF1Q8NEP3 725 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 LGALS14Q8TCE9 139 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 STT3BQ8TCJ2 826 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 SLC2A12Q8TD20 617 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 RHBDD1Q8TEB9 315 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 ARL11Q969Q4 196 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 DNAJA3Q96EY1 480 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 SLC41A3Q96GZ6 507 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 NXF5Q9H1B4 397 aaKnown RBP14.36□□□□□ -0.11
RTN1-209ENST00000611068 DNAJB11Q9UBS4 358 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 TP53TG5Q9Y2B4 290 aa14.36□□□□□ -0.11
RTN1-209ENST00000611068 A0A1W2PRQ8 180 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 SULT2B1O00204 365 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 CTDSPLO15194 276 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 NID1P14543 1247 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 GALP22466 123 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 RAB5CP51148 216 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 LRRC37A5PQ49AS3 106 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 SLC23A3Q6PIS1 610 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 WDR88Q6ZMY6 472 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 COX15Q7KZN9 410 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 NRMQ8IXM6 262 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 SIRT6Q8N6T7 355 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 MORN4Q8NDC4 146 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 DIO2Q92813 273 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 C3orf49Q96BT1 292 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 OCSTAMPQ9BR26 566 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 UTP23Q9BRU9 249 aaKnown RBP14.35□□□□□ -0.11
RTN1-209ENST00000611068 NUDT9Q9BW91 350 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 CHRNA10Q9GZZ6 450 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 Q9N2J8 555 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 TRAPPC13A5PLN9 417 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 NAP1L6A6NFF2 107 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 MARCH11A6NNE9 402 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 KDM4EB2RXH2 506 aaPredicted RBP14.35□□□□□ -0.11
RTN1-209ENST00000611068 ZNF28P17035 718 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 FUT7Q11130 342 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 TRAM1Q15629 374 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 EXOSC6Q5RKV6 272 aaKnown RBP14.35□□□□□ -0.11
RTN1-209ENST00000611068 PRAMEF8Q5VWM4 474 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 PRAMEF7Q5VXH5 474 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 MED25Q71SY5 747 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 C8orf44Q96CB5 159 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 TIMP4Q99727 224 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 CHST5Q9GZS9 411 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 FBXO4Q9UKT5 387 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 RARRES3Q9UL19 164 aa14.35□□□□□ -0.11
RTN1-209ENST00000611068 DMXL1Q9Y485 3027 aa14.34□□□□□ -0.11
RTN1-209ENST00000611068 LNP1A1A4G5 178 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms