RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 ACHEP22303 614 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 AVPR2P30518 371 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 MAGEB1P43366 347 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 SPINK14Q6IE38 97 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 OR5AS1Q8N127 324 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 OR2V1Q8NHB1 315 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 AKR7LQ8NHP1 331 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 DNASE2BQ8WZ79 361 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 ELMOD3Q96FG2 381 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 RNF170Q96K19 258 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 DERL3Q96Q80 235 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 PI4KAP42356 2102 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 A0A0A6YYH2 397 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 LOC100289279A0A1B0GTE1 492 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 A0A1W2PPC1 479 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 TRABD2BA6NFA1 517 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 A6NJ64 397 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 BET1O15155 118 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 ZNF254O75437 659 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 GCM2O75603 506 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-218ENST00000610726 SULT1C4O75897 302 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 SERPINA7P05543 415 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 GABRA2P47869 451 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 PMPCAQ10713 525 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 AIMP2Q13155 320 aaKnown RBP6.56□□□□□ -1.36
CSDE1-218ENST00000610726 PPA1Q15181 289 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 SGPP2Q8IWX5 399 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 C9orf40Q8IXQ3 194 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 OR5M9Q8NGP3 310 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 OR4K15Q8NH41 348 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 NUBPLQ8TB37 319 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 SNAPC3Q92966 411 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 WFDC6Q9BQY6 131 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 SIAEQ9HAT2 523 aa6.56□□□□□ -1.36
CSDE1-218ENST00000610726 SLC33A1O00400 549 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-218ENST00000610726 OIP5O43482 229 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 HLA-AP01891 365 aaKnown RBP6.55□□□□□ -1.36
CSDE1-218ENST00000610726 ZNF806P0C7X5 589 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 PET100P0DJ07 73 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 CSF2RBP32927 897 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 MEF2DQ14814 521 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 ETFDHQ16134 617 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 LTC4SQ16873 150 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 AADACL4Q5VUY2 407 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 CD300LDQ6UXZ3 194 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 SEMA6DQ8NFY4 1073 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 PPP1R35Q8TAP8 253 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 KCNE4Q8WWG9 221 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 SARAFQ96BY9 339 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 PELI1Q96FA3 418 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 TXNDC15Q96J42 360 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 C7orf50Q9BRJ6 194 aaKnown RBP6.55□□□□□ -1.36
CSDE1-218ENST00000610726 SARGQ9BW04 601 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 GLTPQ9NZD2 209 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 KCNN3Q9UGI6 736 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 TIMM10BQ9Y5J6 103 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 COL6A6A6NMZ7 2263 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 CHD5Q8TDI0 1954 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 VWA8A3KMH1 1905 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 C5orf49A4QMS7 147 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 MKRN2OSH3BPM6 223 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 SLC34A2O95436 690 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 RAF1P04049 648 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 ALDOBP05062 364 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 HOXB5P09067 269 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 CTLA4P16410 223 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 CPT2P23786 658 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 DEFA5Q01523 94 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 EGR3Q06889 387 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 SLC9A3R2Q15599 337 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 C3P1Q6ZMU1 363 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 DOK3Q7L591 496 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 ADGRE4PQ86SQ3 457 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 WDR5BQ86VZ2 330 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 SULF2Q8IWU5 870 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 NKAIN3Q8N8D7 197 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 OR56B4Q8NH76 319 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 OTOSQ8NHW6 89 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 GIMAP1Q8WWP7 306 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 SCARF2Q96GP6 870 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-218ENST00000610726 TSPAN32Q96QS1 320 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 NICN1Q9BSH3 213 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 OR2B2Q9GZK3 357 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 RANGRFQ9HD47 186 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-218ENST00000610726 DYNLRB1Q9NP97 96 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 TREM1Q9NP99 234 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 ZFP64Q9NPA5 681 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 ISYNA1Q9NPH2 558 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 LHX6Q9UPM6 363 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 IFITM5A6NNB3 132 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 PRAF2O60831 178 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 MPZL1O95297 269 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 IGKV1D-16P01601 117 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 TCRBP04435 133 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 GAAP10253 952 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 ZNF136P52737 540 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 DGCR2P98153 550 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 BDH1Q02338 343 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 SLC25A35Q3KQZ1 300 aa6.55□□□□□ -1.36
CSDE1-218ENST00000610726 STEAP1BQ6NZ63 245 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms