RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 CCDC92Q53HC0 331 aaPredicted RBP12.33□□□□□ -0.44
CTSA-211ENST00000606066 TEX30Q5JUR7 227 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 ELFN2Q5R3F8 820 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 HIST2H3PS2Q5TEC6 136 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 LINC01590Q5TEZ4 76 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 LCN1P1Q5VSP4 162 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 OTPQ5XKR4 325 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 SLC18B1Q6NT16 456 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 VHLLQ6RSH7 139 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 B3GLCTQ6Y288 498 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 HIST2H3AQ71DI3 136 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 VASH1Q7L8A9 365 aaPredicted RBP12.33□□□□□ -0.44
CTSA-211ENST00000606066 C1orf174Q8IYL3 243 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 MUC15Q8N387 334 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 PACRGLQ8N7B6 248 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 ZNF511Q8NB15 262 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 OR8J1Q8NGP2 316 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 OR1F12Q8NHA8 337 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 TMEM163Q8TC26 289 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 TRUB1Q8WWH5 349 aaKnown RBP12.33□□□□□ -0.44
CTSA-211ENST00000606066 IPCEF1Q8WWN9 437 aaPredicted RBP12.33□□□□□ -0.44
CTSA-211ENST00000606066 INTS14Q96SY0 518 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 BCL2L14Q9BZR8 327 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 GRIP2Q9C0E4 1043 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 CXorf56Q9H5V9 222 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 IMPAD1Q9NX62 359 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 GDF2Q9UK05 429 aaPredicted RBP12.33□□□□□ -0.44
CTSA-211ENST00000606066 LAMP3Q9UQV4 416 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 COMMD3-BMI1R4GMX3 469 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 LOC100509620A0A075B734 347 aa12.32□□□□□ -0.44
CTSA-211ENST00000606066 OR6C6A6NF89 314 aa12.32□□□□□ -0.44
CTSA-211ENST00000606066 SPARCP09486 303 aa12.32□□□□□ -0.44
CTSA-211ENST00000606066 FOSL1P15407 271 aa12.32□□□□□ -0.44
CTSA-211ENST00000606066 CD53P19397 219 aa12.32□□□□□ -0.44
CTSA-211ENST00000606066 THBS4P35443 961 aa12.32□□□□□ -0.44
CTSA-211ENST00000606066 SERPINF1P36955 418 aa12.32□□□□□ -0.44
CTSA-211ENST00000606066 UCP2P55851 309 aa12.32□□□□□ -0.44
CTSA-211ENST00000606066 NKX6-1P78426 367 aaPredicted RBP12.32□□□□□ -0.44
CTSA-211ENST00000606066 EFNB1P98172 346 aa12.32□□□□□ -0.44
CTSA-211ENST00000606066 PCK2Q16822 640 aa12.32□□□□□ -0.44
CTSA-211ENST00000606066 NXNL2Q5VZ03 156 aa12.32□□□□□ -0.44
CTSA-211ENST00000606066 CORO6Q6QEF8 472 aa12.32□□□□□ -0.44
CTSA-211ENST00000606066 SHFQ7M4L6 423 aa12.32□□□□□ -0.44
CTSA-211ENST00000606066 ERI1Q8IV48 349 aaKnown RBP12.32□□□□□ -0.44
CTSA-211ENST00000606066 LINC00346Q8IVM7 164 aa12.32□□□□□ -0.44
CTSA-211ENST00000606066 GID4Q8IVV7 300 aa12.32□□□□□ -0.44
CTSA-211ENST00000606066 MBD6Q96DN6 1003 aa12.32□□□□□ -0.44
CTSA-211ENST00000606066 HRASLS5Q96KN8 279 aa12.32□□□□□ -0.44
CTSA-211ENST00000606066 DCLRE1CQ96SD1 692 aaKnown RBP12.32□□□□□ -0.44
CTSA-211ENST00000606066 PITX2Q99697 317 aa12.32□□□□□ -0.44
CTSA-211ENST00000606066 COQ7Q99807 217 aa12.32□□□□□ -0.44
CTSA-211ENST00000606066 VCXQ9H320 206 aa12.32□□□□□ -0.44
CTSA-211ENST00000606066 TOR3AQ9H497 397 aa12.32□□□□□ -0.44
CTSA-211ENST00000606066 WDR76Q9H967 626 aa12.32□□□□□ -0.44
CTSA-211ENST00000606066 ELOVL3Q9HB03 270 aa12.32□□□□□ -0.44
CTSA-211ENST00000606066 CBLN4Q9NTU7 201 aa12.32□□□□□ -0.44
CTSA-211ENST00000606066 BEX4Q9NWD9 120 aaPredicted RBP12.32□□□□□ -0.44
CTSA-211ENST00000606066 SMPD3Q9NY59 655 aaPredicted RBP12.32□□□□□ -0.44
CTSA-211ENST00000606066 FBXO9Q9UK97 447 aaPredicted RBP12.32□□□□□ -0.44
CTSA-211ENST00000606066 CMAHPQ9Y471 501 aa12.32□□□□□ -0.44
CTSA-211ENST00000606066 AKAP6Q13023 2319 aa12.31□□□□□ -0.44
CTSA-211ENST00000606066 SLC22A31A6NKX4 558 aa12.31□□□□□ -0.44
CTSA-211ENST00000606066 SYNGR3O43761 229 aa12.31□□□□□ -0.44
CTSA-211ENST00000606066 SOD3P08294 240 aa12.31□□□□□ -0.44
CTSA-211ENST00000606066 OR4A8P0C604 315 aa12.31□□□□□ -0.44
CTSA-211ENST00000606066 SLC2A5P22732 501 aa12.31□□□□□ -0.44
CTSA-211ENST00000606066 SLC34A1Q06495 639 aa12.31□□□□□ -0.44
CTSA-211ENST00000606066 APOFQ13790 326 aa12.31□□□□□ -0.44
CTSA-211ENST00000606066 LRRC36Q1X8D7 754 aa12.31□□□□□ -0.44
CTSA-211ENST00000606066 AADACL4Q5VUY2 407 aa12.31□□□□□ -0.44
CTSA-211ENST00000606066 LPCAT4Q643R3 524 aa12.31□□□□□ -0.44
CTSA-211ENST00000606066 TMEM154Q6P9G4 183 aa12.31□□□□□ -0.44
CTSA-211ENST00000606066 MEPCEQ7L2J0 689 aaKnown RBP12.31□□□□□ -0.44
CTSA-211ENST00000606066 DTX2Q86UW9 622 aa12.31□□□□□ -0.44
CTSA-211ENST00000606066 GALNT4Q8N4A0 578 aa12.31□□□□□ -0.44
CTSA-211ENST00000606066 PAQR4Q8N4S7 273 aaPredicted RBP12.31□□□□□ -0.44
CTSA-211ENST00000606066 ZNF555Q8NEP9 628 aa12.31□□□□□ -0.44
CTSA-211ENST00000606066 BBS1Q8NFJ9 593 aa12.31□□□□□ -0.44
CTSA-211ENST00000606066 OR6N2Q8NGY6 317 aa12.31□□□□□ -0.44
CTSA-211ENST00000606066 FAM81AQ8TBF8 368 aa12.31□□□□□ -0.44
CTSA-211ENST00000606066 ZMYND19Q96E35 227 aaPredicted RBP12.31□□□□□ -0.44
CTSA-211ENST00000606066 C4orf45Q96LM5 186 aa12.31□□□□□ -0.44
CTSA-211ENST00000606066 IL4I1Q96RQ9 567 aa12.31□□□□□ -0.44
CTSA-211ENST00000606066 TEAD3Q99594 435 aa12.31□□□□□ -0.44
CTSA-211ENST00000606066 ATF6BQ99941 703 aa12.31□□□□□ -0.44
CTSA-211ENST00000606066 MARCH7Q9H992 704 aa12.31□□□□□ -0.44
CTSA-211ENST00000606066 GMPPBQ9Y5P6 360 aa12.31□□□□□ -0.44
CTSA-211ENST00000606066 B9A039 149 aa12.3□□□□□ -0.44
CTSA-211ENST00000606066 CASQ2O14958 399 aaPredicted RBP12.3□□□□□ -0.44
CTSA-211ENST00000606066 ICMTO60725 284 aa12.3□□□□□ -0.44
CTSA-211ENST00000606066 SMPD2O60906 423 aa12.3□□□□□ -0.44
CTSA-211ENST00000606066 ABHD16AO95870 558 aa12.3□□□□□ -0.44
CTSA-211ENST00000606066 LCKP06239 509 aa12.3□□□□□ -0.44
CTSA-211ENST00000606066 FAM157BP0CG42 384 aa12.3□□□□□ -0.44
CTSA-211ENST00000606066 TUBG1P23258 451 aa12.3□□□□□ -0.44
CTSA-211ENST00000606066 PEX2P28328 305 aa12.3□□□□□ -0.44
CTSA-211ENST00000606066 RPS27P42677 84 aaKnown RBP12.3□□□□□ -0.44
CTSA-211ENST00000606066 RGS6P49758 472 aa12.3□□□□□ -0.44
CTSA-211ENST00000606066 SELENOVP59797 346 aa12.3□□□□□ -0.44
CTSA-211ENST00000606066 SNRPD2P62316 118 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms