RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 DCTDP32321 178 aa19.79■□□□□ 0.76
IRF3-228ENST00000601291 GRB2P62993 217 aaKnown RBP19.79■□□□□ 0.76
IRF3-228ENST00000601291 PMPCAQ10713 525 aa19.79■□□□□ 0.76
IRF3-228ENST00000601291 GTF3C1Q12789 2109 aa19.79■□□□□ 0.76
IRF3-228ENST00000601291 ZNF829Q3KNS6 432 aaPredicted RBP19.79■□□□□ 0.76
IRF3-228ENST00000601291 SLC16A12Q6ZSM3 486 aa19.79■□□□□ 0.76
IRF3-228ENST00000601291 DOCK7Q96N67 2140 aa19.79■□□□□ 0.76
IRF3-228ENST00000601291 PNRC2Q9NPJ4 139 aaKnown RBP19.79■□□□□ 0.76
IRF3-228ENST00000601291 PLEK2Q9NYT0 353 aa19.79■□□□□ 0.76
IRF3-228ENST00000601291 STUB1Q9UNE7 303 aa19.79■□□□□ 0.76
IRF3-228ENST00000601291 DSPP15924 2871 aaKnown RBP19.78■□□□□ 0.76
IRF3-228ENST00000601291 A0A096LPE4 126 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 TRGV8A0A0C4DH27 118 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 A0A1W2PPZ6 126 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 ZNF32P17041 273 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 IGHV1-2P23083 117 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 OPRM1P35372 400 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 RAB35Q15286 201 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 ELFN2Q5R3F8 820 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 BEND4Q6ZU67 534 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 DPPA2Q7Z7J5 298 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 DOK1Q99704 481 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 ATF6BQ99941 703 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 HDHD2Q9H0R4 259 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 DDX28Q9NUL7 540 aaKnown RBP19.78■□□□□ 0.76
IRF3-228ENST00000601291 ARHGAP21Q5T5U3 1957 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 TLN1Q9Y490 2541 aaKnown RBP19.78■□□□□ 0.76
IRF3-228ENST00000601291 SVILO95425 2214 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 E9PLN8 166 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 SGCEO43556 437 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 CD1AP06126 327 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 GDI2P50395 445 aaKnown RBP19.78■□□□□ 0.76
IRF3-228ENST00000601291 RPS25P62851 125 aaKnown RBP19.78■□□□□ 0.76
IRF3-228ENST00000601291 SLC3A1Q07837 685 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 ALKBH1Q13686 389 aaKnown RBP19.78■□□□□ 0.76
IRF3-228ENST00000601291 TRAM1Q15629 374 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 TMEM211Q6ICI0 200 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 FDX2Q6P4F2 183 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 NANOS1Q8WY41 292 aaKnown RBP19.78■□□□□ 0.76
IRF3-228ENST00000601291 C12orf43Q96C57 262 aaKnown RBP19.78■□□□□ 0.76
IRF3-228ENST00000601291 VKORC1Q9BQB6 163 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 TMED9Q9BVK6 235 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 OPN3Q9H1Y3 402 aaPredicted RBP19.78■□□□□ 0.76
IRF3-228ENST00000601291 OR51E2Q9H255 320 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 RNF121Q9H920 327 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 GALNT8Q9NY28 637 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 SLC5A6Q9Y289 635 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 R4GMQ9 66 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 PKD1L2Q7Z442 2459 aa19.78■□□□□ 0.76
IRF3-228ENST00000601291 CIB4A0PJX0 185 aa19.77■□□□□ 0.76
IRF3-228ENST00000601291 H3BMQ9 156 aa19.77■□□□□ 0.76
IRF3-228ENST00000601291 DOK2O60496 412 aa19.77■□□□□ 0.76
IRF3-228ENST00000601291 COX5AP20674 150 aa19.77■□□□□ 0.76
IRF3-228ENST00000601291 NR4A1P22736 598 aa19.77■□□□□ 0.76
IRF3-228ENST00000601291 CCDC92Q53HC0 331 aaPredicted RBP19.77■□□□□ 0.76
IRF3-228ENST00000601291 GDPGP1Q6ZNW5 385 aa19.77■□□□□ 0.76
IRF3-228ENST00000601291 ZNF610Q8N9Z0 462 aa19.77■□□□□ 0.76
IRF3-228ENST00000601291 HSD17B8Q92506 261 aa19.77■□□□□ 0.76
IRF3-228ENST00000601291 TMEM203Q969S6 136 aa19.77■□□□□ 0.76
IRF3-228ENST00000601291 CHCHD6Q9BRQ6 235 aa19.77■□□□□ 0.76
IRF3-228ENST00000601291 OR2H1Q9GZK4 316 aa19.77■□□□□ 0.76
IRF3-228ENST00000601291 PIGMQ9H3S5 423 aa19.77■□□□□ 0.76
IRF3-228ENST00000601291 FBXL3Q9UKT7 428 aa19.77■□□□□ 0.76
IRF3-228ENST00000601291 SSR3Q9UNL2 185 aa19.77■□□□□ 0.76
IRF3-228ENST00000601291 GTF2A1LQ9UNN4 478 aa19.77■□□□□ 0.76
IRF3-228ENST00000601291 SF3B6Q9Y3B4 125 aaKnown RBP19.77■□□□□ 0.76
IRF3-228ENST00000601291 LOC100506127A0A0U1RQW1 187 aa19.76■□□□□ 0.75
IRF3-228ENST00000601291 GPRIN2O60269 458 aa19.76■□□□□ 0.75
IRF3-228ENST00000601291 HLA-DPB1P04440 258 aa19.76■□□□□ 0.75
IRF3-228ENST00000601291 CA7P43166 264 aa19.76■□□□□ 0.75
IRF3-228ENST00000601291 NANOS3P60323 173 aaKnown RBP19.76■□□□□ 0.75
IRF3-228ENST00000601291 ECH1Q13011 328 aa19.76■□□□□ 0.75
IRF3-228ENST00000601291 P2RY6Q15077 328 aa19.76■□□□□ 0.75
IRF3-228ENST00000601291 CTF1Q16619 201 aa19.76■□□□□ 0.75
IRF3-228ENST00000601291 GABRG1Q8N1C3 465 aa19.76■□□□□ 0.75
IRF3-228ENST00000601291 MS4A15Q8N5U1 240 aa19.76■□□□□ 0.75
IRF3-228ENST00000601291 OR2G2Q8NGZ5 317 aa19.76■□□□□ 0.75
IRF3-228ENST00000601291 RPS4Y2Q8TD47 263 aa19.76■□□□□ 0.75
IRF3-228ENST00000601291 BCL2L2Q92843 193 aaPredicted RBP19.76■□□□□ 0.75
IRF3-228ENST00000601291 GHSRQ92847 366 aa19.76■□□□□ 0.75
IRF3-228ENST00000601291 RPL3LQ92901 407 aaKnown RBP19.76■□□□□ 0.75
IRF3-228ENST00000601291 RNF166Q96A37 237 aaPredicted RBP19.76■□□□□ 0.75
IRF3-228ENST00000601291 PGLYRP3Q96LB9 341 aa19.76■□□□□ 0.75
IRF3-228ENST00000601291 COMMD4Q9H0A8 199 aa19.76■□□□□ 0.75
IRF3-228ENST00000601291 EXOSC4Q9NPD3 245 aaKnown RBP19.76■□□□□ 0.75
IRF3-228ENST00000601291 ACACBO00763 2458 aa19.76■□□□□ 0.75
IRF3-228ENST00000601291 A0A0G2JNJ9 132 aa19.75■□□□□ 0.75
IRF3-228ENST00000601291 TMEM269A0A1B0GVZ9 245 aa19.75■□□□□ 0.75
IRF3-228ENST00000601291 LOC110117498-PIK3R3F6TDL0 507 aa19.75■□□□□ 0.75
IRF3-228ENST00000601291 ATXN7O15265 892 aaPredicted RBP19.75■□□□□ 0.75
IRF3-228ENST00000601291 RAD51DO75771 328 aa19.75■□□□□ 0.75
IRF3-228ENST00000601291 UBL3O95164 117 aa19.75■□□□□ 0.75
IRF3-228ENST00000601291 MMP7P09237 267 aaPredicted RBP19.75■□□□□ 0.75
IRF3-228ENST00000601291 PATE4P0C8F1 98 aa19.75■□□□□ 0.75
IRF3-228ENST00000601291 ARR3P36575 388 aa19.75■□□□□ 0.75
IRF3-228ENST00000601291 CCR9P51686 369 aa19.75■□□□□ 0.75
IRF3-228ENST00000601291 TMEM53Q6P2H8 277 aa19.75■□□□□ 0.75
IRF3-228ENST00000601291 ZNF433Q8N7K0 673 aaPredicted RBP19.75■□□□□ 0.75
IRF3-228ENST00000601291 C1orf162Q8NEQ5 155 aaPredicted RBP19.75■□□□□ 0.75
IRF3-228ENST00000601291 C4orf45Q96LM5 186 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms