RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 DIRC2Q96SL1 478 aa12.22□□□□□ -0.45
IRF3-224ENST00000599680 NMNAT3Q96T66 252 aa12.22□□□□□ -0.45
IRF3-224ENST00000599680 SOX7Q9BT81 388 aa12.22□□□□□ -0.45
IRF3-224ENST00000599680 SRA1Q9HD15 236 aaKnown RBP12.22□□□□□ -0.45
IRF3-224ENST00000599680 RPRD1BQ9NQG5 326 aaKnown RBP12.22□□□□□ -0.45
IRF3-224ENST00000599680 COL6A5A8TX70 2615 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 B4DSR2 109 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 CLDN25C9JDP6 229 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 ARPC3O15145 178 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 CCNB2O95067 398 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 HLA-DQA2P01906 255 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 TFP02787 698 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 HIST1H1CP16403 213 aaKnown RBP12.21□□□□□ -0.45
IRF3-224ENST00000599680 PCMT1P22061 227 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 TUBG1P23258 451 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 CRYBB2P43320 205 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 CDH15P55291 814 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 MVKQ03426 396 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 TRIM25Q14258 630 aaKnown RBP12.21□□□□□ -0.45
IRF3-224ENST00000599680 KCNMB1Q16558 191 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 SLC36A3Q495N2 470 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 PGBD2Q6P3X8 592 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 ZNF620Q6ZNG0 422 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 RINLQ6ZS11 566 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 GLCCI1Q86VQ1 547 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 GJC3Q8NFK1 279 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 OR1F12Q8NHA8 337 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 CLDND2Q8NHS1 167 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 POP5Q969H6 163 aaKnown RBP12.21□□□□□ -0.45
IRF3-224ENST00000599680 TIMD4Q96H15 378 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 TSSK2Q96PF2 358 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 CDADC1Q9BWV3 514 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 MAGIXQ9H6Y5 334 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 TUBG2Q9NRH3 451 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 TBCCD1Q9NVR7 557 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 ATPIF1Q9UII2 106 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 ZDHHC8Q9ULC8 765 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 PRPF19Q9UMS4 504 aaKnown RBP12.21□□□□□ -0.45
IRF3-224ENST00000599680 B9D1Q9UPM9 204 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 LYVE1Q9Y5Y7 322 aa12.21□□□□□ -0.45
IRF3-224ENST00000599680 OR6C6A6NF89 314 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 RP2O75695 350 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 GPANK1O95872 356 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 IGHV1-46P01743 117 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 TNFSF4P23510 183 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 RGS6P49758 472 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 MMP15P51511 669 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 MEP1BQ16820 701 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 CR1LQ2VPA4 569 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 CLEC12AQ5QGZ9 265 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 SLC35F1Q5T1Q4 408 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 AVPI1Q5T686 147 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 LCN8Q6JVE9 175 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 SDR9C7Q8NEX9 313 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 OR9Q2Q8NGE9 314 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 OR5L1Q8NGL2 311 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 OR2AJ1Q8NGZ0 328 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 RAB1CQ92928 201 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 CCDC124Q96CT7 223 aaKnown RBP12.2□□□□□ -0.46
IRF3-224ENST00000599680 DCLRE1CQ96SD1 692 aaKnown RBP12.2□□□□□ -0.46
IRF3-224ENST00000599680 MDFIQ99750 246 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 TRIM15Q9C019 465 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 RACGAP1Q9H0H5 632 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 HDHD2Q9H0R4 259 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 FN3KQ9H479 309 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 EGLN3Q9H6Z9 239 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 REEP1Q9H902 201 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 TBC1D23Q9NUY8 699 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 TREM2Q9NZC2 230 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 TMEFF2Q9UIK5 374 aaPredicted RBP12.2□□□□□ -0.46
IRF3-224ENST00000599680 CDH10Q9Y6N8 788 aa12.2□□□□□ -0.46
IRF3-224ENST00000599680 IGLV1-36A0A0B4J1U3 117 aa12.19□□□□□ -0.46
IRF3-224ENST00000599680 TCRBV5S2A0A599 114 aa12.19□□□□□ -0.46
IRF3-224ENST00000599680 ZSCAN5BA6NJL1 495 aa12.19□□□□□ -0.46
IRF3-224ENST00000599680 RNF212BA8MTL3 300 aa12.19□□□□□ -0.46
IRF3-224ENST00000599680 DCTN6O00399 190 aa12.19□□□□□ -0.46
IRF3-224ENST00000599680 RER1O15258 196 aa12.19□□□□□ -0.46
IRF3-224ENST00000599680 SRP14P37108 136 aaKnown RBP12.19□□□□□ -0.46
IRF3-224ENST00000599680 MAGEA2P43356 314 aa12.19□□□□□ -0.46
IRF3-224ENST00000599680 TNFAIP6P98066 277 aaPredicted RBP12.19□□□□□ -0.46
IRF3-224ENST00000599680 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.19□□□□□ -0.46
IRF3-224ENST00000599680 SLC3A1Q07837 685 aa12.19□□□□□ -0.46
IRF3-224ENST00000599680 PSG7Q13046 419 aa12.19□□□□□ -0.46
IRF3-224ENST00000599680 CCDC92Q53HC0 331 aaPredicted RBP12.19□□□□□ -0.46
IRF3-224ENST00000599680 CXXC5Q7LFL8 322 aaKnown RBP12.19□□□□□ -0.46
IRF3-224ENST00000599680 PEG10Q86TG7 708 aaKnown RBP12.19□□□□□ -0.46
IRF3-224ENST00000599680 OR6V1Q8N148 313 aa12.19□□□□□ -0.46
IRF3-224ENST00000599680 OR52E2Q8NGJ4 325 aa12.19□□□□□ -0.46
IRF3-224ENST00000599680 SLC7A6Q92536 515 aa12.19□□□□□ -0.46
IRF3-224ENST00000599680 CCL17Q92583 94 aa12.19□□□□□ -0.46
IRF3-224ENST00000599680 RAB39BQ96DA2 213 aa12.19□□□□□ -0.46
IRF3-224ENST00000599680 MSL2Q9HCI7 577 aa12.19□□□□□ -0.46
IRF3-224ENST00000599680 PURGQ9UJV8 347 aaKnown RBP12.19□□□□□ -0.46
IRF3-224ENST00000599680 STARD10Q9Y365 291 aa12.19□□□□□ -0.46
IRF3-224ENST00000599680 SAMHD1Q9Y3Z3 626 aaKnown RBP12.19□□□□□ -0.46
IRF3-224ENST00000599680 LHFPL6Q9Y693 200 aa12.19□□□□□ -0.46
IRF3-224ENST00000599680 ISPDA4D126 451 aa12.18□□□□□ -0.46
IRF3-224ENST00000599680 J3QW42 95 aa12.18□□□□□ -0.46
IRF3-224ENST00000599680 GAAP10253 952 aa12.18□□□□□ -0.46
IRF3-224ENST00000599680 ANPEPP15144 967 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms