RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 GASTP01350 101 aa15.95■□□□□ 0.14
PNKP-213ENST00000599543 ANPEPP15144 967 aa15.95■□□□□ 0.14
PNKP-213ENST00000599543 WNT5AP41221 380 aa15.95■□□□□ 0.14
PNKP-213ENST00000599543 ZNF81P51508 661 aa15.95■□□□□ 0.14
PNKP-213ENST00000599543 HMGA2P52926 109 aa15.95■□□□□ 0.14
PNKP-213ENST00000599543 PCBD1P61457 104 aa15.95■□□□□ 0.14
PNKP-213ENST00000599543 LMO4P61968 165 aa15.95■□□□□ 0.14
PNKP-213ENST00000599543 PSG4Q00888 419 aa15.95■□□□□ 0.14
PNKP-213ENST00000599543 TSTQ16762 297 aaKnown RBP15.95■□□□□ 0.14
PNKP-213ENST00000599543 HFEQ30201 348 aa15.95■□□□□ 0.14
PNKP-213ENST00000599543 AQP11Q8NBQ7 271 aa15.95■□□□□ 0.14
PNKP-213ENST00000599543 FANK1Q8TC84 345 aa15.95■□□□□ 0.14
PNKP-213ENST00000599543 IPCEF1Q8WWN9 437 aaPredicted RBP15.95■□□□□ 0.14
PNKP-213ENST00000599543 SAMD8Q96LT4 415 aa15.95■□□□□ 0.14
PNKP-213ENST00000599543 OR2H1Q9GZK4 316 aa15.95■□□□□ 0.14
PNKP-213ENST00000599543 EGLN3Q9H6Z9 239 aa15.95■□□□□ 0.14
PNKP-213ENST00000599543 ZNF665Q9H7R5 613 aa15.95■□□□□ 0.14
PNKP-213ENST00000599543 LOC100509620A0A075B734 347 aa15.94■□□□□ 0.14
PNKP-213ENST00000599543 TRAV20A0A0B4J274 112 aa15.94■□□□□ 0.14
PNKP-213ENST00000599543 TEX13CA0A0J9YWL9 993 aa15.94■□□□□ 0.14
PNKP-213ENST00000599543 A0A1W2PPL8 197 aa15.94■□□□□ 0.14
PNKP-213ENST00000599543 A6NIZ1 184 aa15.94■□□□□ 0.14
PNKP-213ENST00000599543 PNPP00491 289 aa15.94■□□□□ 0.14
PNKP-213ENST00000599543 CST2P09228 141 aa15.94■□□□□ 0.14
PNKP-213ENST00000599543 FPR3P25089 353 aa15.94■□□□□ 0.14
PNKP-213ENST00000599543 LAP3P28838 519 aa15.94■□□□□ 0.14
PNKP-213ENST00000599543 GSSP48637 474 aa15.94■□□□□ 0.14
PNKP-213ENST00000599543 RAP1BP61224 184 aa15.94■□□□□ 0.14
PNKP-213ENST00000599543 RAP1AP62834 184 aa15.94■□□□□ 0.14
PNKP-213ENST00000599543 ANKDD1AQ495B1 522 aa15.94■□□□□ 0.14
PNKP-213ENST00000599543 FAM209AQ5JX71 171 aa15.94■□□□□ 0.14
PNKP-213ENST00000599543 ZNF770Q6IQ21 691 aaPredicted RBP15.94■□□□□ 0.14
PNKP-213ENST00000599543 C1orf94Q6P1W5 598 aa15.94■□□□□ 0.14
PNKP-213ENST00000599543 FAHD2BQ6P2I3 314 aaPredicted RBP15.94■□□□□ 0.14
PNKP-213ENST00000599543 C1orf174Q8IYL3 243 aa15.94■□□□□ 0.14
PNKP-213ENST00000599543 ABHD4Q8TB40 342 aa15.94■□□□□ 0.14
PNKP-213ENST00000599543 RAB39BQ96DA2 213 aa15.94■□□□□ 0.14
PNKP-213ENST00000599543 ELMOD3Q96FG2 381 aa15.94■□□□□ 0.14
PNKP-213ENST00000599543 FAHD2AQ96GK7 314 aa15.94■□□□□ 0.14
PNKP-213ENST00000599543 MARS2Q96GW9 593 aaKnown RBP15.94■□□□□ 0.14
PNKP-213ENST00000599543 TIMD4Q96H15 378 aa15.94■□□□□ 0.14
PNKP-213ENST00000599543 OR52D1Q9H346 318 aa15.94■□□□□ 0.14
PNKP-213ENST00000599543 MMADHCQ9H3L0 296 aaPredicted RBP15.94■□□□□ 0.14
PNKP-213ENST00000599543 TIMM10BQ9Y5J6 103 aa15.94■□□□□ 0.14
PNKP-213ENST00000599543 IER3IP1Q9Y5U9 82 aa15.94■□□□□ 0.14
PNKP-213ENST00000599543 SOCS2O14508 198 aa15.93■□□□□ 0.14
PNKP-213ENST00000599543 SPRY3O43610 288 aa15.93■□□□□ 0.14
PNKP-213ENST00000599543 CD14P08571 375 aa15.93■□□□□ 0.14
PNKP-213ENST00000599543 MSR1P21757 451 aa15.93■□□□□ 0.14
PNKP-213ENST00000599543 IFNGR2P38484 337 aa15.93■□□□□ 0.14
PNKP-213ENST00000599543 MPV17P39210 176 aa15.93■□□□□ 0.14
PNKP-213ENST00000599543 TSPAN31Q12999 210 aa15.93■□□□□ 0.14
PNKP-213ENST00000599543 MICAQ29983 383 aa15.93■□□□□ 0.14
PNKP-213ENST00000599543 MESTQ5EB52 335 aa15.93■□□□□ 0.14
PNKP-213ENST00000599543 CLEC12AQ5QGZ9 265 aa15.93■□□□□ 0.14
PNKP-213ENST00000599543 MBNL2Q5VZF2 373 aaKnown RBP15.93■□□□□ 0.14
PNKP-213ENST00000599543 ACSM5Q6NUN0 579 aa15.93■□□□□ 0.14
PNKP-213ENST00000599543 SMARCD3Q6STE5 483 aa15.93■□□□□ 0.14
PNKP-213ENST00000599543 RFPL4BQ6ZWI9 263 aa15.93■□□□□ 0.14
PNKP-213ENST00000599543 PAPD5Q8NDF8 572 aaKnown RBP15.93■□□□□ 0.14
PNKP-213ENST00000599543 OR10G2Q8NGC3 310 aa15.93■□□□□ 0.14
PNKP-213ENST00000599543 SLC25A40Q8TBP6 338 aa15.93■□□□□ 0.14
PNKP-213ENST00000599543 KLF14Q8TD94 323 aaPredicted RBP15.93■□□□□ 0.14
PNKP-213ENST00000599543 ZNF570Q96NI8 536 aa15.93■□□□□ 0.14
PNKP-213ENST00000599543 OR2J1Q9GZK6 312 aa15.93■□□□□ 0.14
PNKP-213ENST00000599543 WNT5BQ9H1J7 359 aa15.93■□□□□ 0.14
PNKP-213ENST00000599543 GRHPRQ9UBQ7 328 aa15.93■□□□□ 0.14
PNKP-213ENST00000599543 WIPI2Q9Y4P8 454 aa15.93■□□□□ 0.14
PNKP-213ENST00000599543 E2F6O75461 281 aa15.92■□□□□ 0.14
PNKP-213ENST00000599543 SOX14O95416 240 aa15.92■□□□□ 0.14
PNKP-213ENST00000599543 IGHV1-46P01743 117 aa15.92■□□□□ 0.14
PNKP-213ENST00000599543 PRKACGP22612 351 aa15.92■□□□□ 0.14
PNKP-213ENST00000599543 MMP15P51511 669 aa15.92■□□□□ 0.14
PNKP-213ENST00000599543 ARHGDIAP52565 204 aa15.92■□□□□ 0.14
PNKP-213ENST00000599543 PPP1CBP62140 327 aa15.92■□□□□ 0.14
PNKP-213ENST00000599543 KRR1Q13601 381 aaKnown RBP15.92■□□□□ 0.14
PNKP-213ENST00000599543 KPNB1Q14974 876 aaKnown RBP15.92■□□□□ 0.14
PNKP-213ENST00000599543 OTPQ5XKR4 325 aa15.92■□□□□ 0.14
PNKP-213ENST00000599543 ZNF774Q6NX45 483 aa15.92■□□□□ 0.14
PNKP-213ENST00000599543 ARL9Q6T311 187 aa15.92■□□□□ 0.14
PNKP-213ENST00000599543 FAM122BQ7Z309 247 aa15.92■□□□□ 0.14
PNKP-213ENST00000599543 TEX29Q8N6K0 151 aa15.92■□□□□ 0.14
PNKP-213ENST00000599543 GIPC3Q8TF64 312 aa15.92■□□□□ 0.14
PNKP-213ENST00000599543 RAB1CQ92928 201 aa15.92■□□□□ 0.14
PNKP-213ENST00000599543 POP5Q969H6 163 aaKnown RBP15.92■□□□□ 0.14
PNKP-213ENST00000599543 ERMAPQ96PL5 475 aaPredicted RBP15.92■□□□□ 0.14
PNKP-213ENST00000599543 NIPSNAP1Q9BPW8 284 aa15.92■□□□□ 0.14
PNKP-213ENST00000599543 PLA2G12AQ9BZM1 189 aa15.92■□□□□ 0.14
PNKP-213ENST00000599543 ELOVL3Q9HB03 270 aa15.92■□□□□ 0.14
PNKP-213ENST00000599543 CYSLTR2Q9NS75 346 aa15.92■□□□□ 0.14
PNKP-213ENST00000599543 CGGBP1Q9UFW8 167 aaPredicted RBP15.92■□□□□ 0.14
PNKP-213ENST00000599543 CACNG2Q9Y698 323 aa15.92■□□□□ 0.14
PNKP-213ENST00000599543 A0A0A6YYJ9 748 aa15.91■□□□□ 0.14
PNKP-213ENST00000599543 C12orf71A8MTZ7 269 aa15.91■□□□□ 0.14
PNKP-213ENST00000599543 H3BSA7 217 aa15.91■□□□□ 0.14
PNKP-213ENST00000599543 MPZL1O95297 269 aa15.91■□□□□ 0.14
PNKP-213ENST00000599543 LIPAP38571 399 aa15.91■□□□□ 0.14
PNKP-213ENST00000599543 RFX4Q33E94 735 aa15.91■□□□□ 0.14
PNKP-213ENST00000599543 ZMAT1Q5H9K5 638 aa15.91■□□□□ 0.14
PNKP-213ENST00000599543 ZNF620Q6ZNG0 422 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms