RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 C10orf82Q8WW14 230 aa17.77■□□□□ 0.44
PNKP-212ENST00000599454 EMC7Q9NPA0 242 aa17.77■□□□□ 0.44
PNKP-212ENST00000599454 STARD10Q9Y365 291 aa17.77■□□□□ 0.44
PNKP-212ENST00000599454 A0A0G2JND7 137 aa17.76■□□□□ 0.43
PNKP-212ENST00000599454 BBIP1A8MTZ0 92 aa17.76■□□□□ 0.43
PNKP-212ENST00000599454 EFCAB9A8MZ26 197 aa17.76■□□□□ 0.43
PNKP-212ENST00000599454 FAM220BPB1ANY3 271 aa17.76■□□□□ 0.43
PNKP-212ENST00000599454 SCG5P05408 212 aa17.76■□□□□ 0.43
PNKP-212ENST00000599454 WNT2P09544 360 aa17.76■□□□□ 0.43
PNKP-212ENST00000599454 RAC2P15153 192 aa17.76■□□□□ 0.43
PNKP-212ENST00000599454 CD80P33681 288 aa17.76■□□□□ 0.43
PNKP-212ENST00000599454 MMP16P51512 607 aa17.76■□□□□ 0.43
PNKP-212ENST00000599454 SELENOWP63302 87 aa17.76■□□□□ 0.43
PNKP-212ENST00000599454 AQP6Q13520 282 aa17.76■□□□□ 0.43
PNKP-212ENST00000599454 FHL1Q13642 323 aa17.76■□□□□ 0.43
PNKP-212ENST00000599454 TRAM2Q15035 370 aa17.76■□□□□ 0.43
PNKP-212ENST00000599454 SLC9A3R2Q15599 337 aa17.76■□□□□ 0.43
PNKP-212ENST00000599454 LEG1Q6P5S2 330 aa17.76■□□□□ 0.43
PNKP-212ENST00000599454 RNF113BQ8IZP6 322 aaKnown RBP17.76■□□□□ 0.43
PNKP-212ENST00000599454 PARP8Q8N3A8 854 aa17.76■□□□□ 0.43
PNKP-212ENST00000599454 LZICQ8WZA0 190 aa17.76■□□□□ 0.43
PNKP-212ENST00000599454 UPRTQ96BW1 309 aa17.76■□□□□ 0.43
PNKP-212ENST00000599454 TPD52L3Q96J77 140 aa17.76■□□□□ 0.43
PNKP-212ENST00000599454 SSBP3Q9BWW4 388 aaPredicted RBP17.76■□□□□ 0.43
PNKP-212ENST00000599454 NDEL1Q9GZM8 345 aa17.76■□□□□ 0.43
PNKP-212ENST00000599454 GCM1Q9NP62 436 aa17.76■□□□□ 0.43
PNKP-212ENST00000599454 GRHPRQ9UBQ7 328 aa17.76■□□□□ 0.43
PNKP-212ENST00000599454 XKRYO14609 159 aa17.75■□□□□ 0.43
PNKP-212ENST00000599454 EDF1O60869 148 aaKnown RBP17.75■□□□□ 0.43
PNKP-212ENST00000599454 RGS6P49758 472 aa17.75■□□□□ 0.43
PNKP-212ENST00000599454 PAX2Q02962 417 aa17.75■□□□□ 0.43
PNKP-212ENST00000599454 PDLIM3Q53GG5 364 aaPredicted RBP17.75■□□□□ 0.43
PNKP-212ENST00000599454 MICU2Q8IYU8 434 aa17.75■□□□□ 0.43
PNKP-212ENST00000599454 PCYOX1LQ8NBM8 494 aa17.75■□□□□ 0.43
PNKP-212ENST00000599454 PLEKHA8Q96JA3 519 aa17.75■□□□□ 0.43
PNKP-212ENST00000599454 FNDC11Q9BVV2 318 aa17.75■□□□□ 0.43
PNKP-212ENST00000599454 MIOXQ9UGB7 285 aa17.75■□□□□ 0.43
PNKP-212ENST00000599454 ATPIF1Q9UII2 106 aa17.75■□□□□ 0.43
PNKP-212ENST00000599454 WNK1Q9H4A3 2382 aa17.75■□□□□ 0.43
PNKP-212ENST00000599454 TEX13CA0A0J9YWL9 993 aa17.74■□□□□ 0.43
PNKP-212ENST00000599454 H7C1C5 153 aa17.74■□□□□ 0.43
PNKP-212ENST00000599454 MRASO14807 208 aa17.74■□□□□ 0.43
PNKP-212ENST00000599454 FSTL3O95633 263 aa17.74■□□□□ 0.43
PNKP-212ENST00000599454 PLATP00750 562 aa17.74■□□□□ 0.43
PNKP-212ENST00000599454 CD14P08571 375 aa17.74■□□□□ 0.43
PNKP-212ENST00000599454 RPS2P15880 293 aaKnown RBP17.74■□□□□ 0.43
PNKP-212ENST00000599454 RPL4P36578 427 aaKnown RBP17.74■□□□□ 0.43
PNKP-212ENST00000599454 LSM6P62312 80 aaKnown RBP17.74■□□□□ 0.43
PNKP-212ENST00000599454 LCN6P62502 163 aa17.74■□□□□ 0.43
PNKP-212ENST00000599454 MAPRE2Q15555 327 aa17.74■□□□□ 0.43
PNKP-212ENST00000599454 ATG16L2Q8NAA4 619 aa17.74■□□□□ 0.43
PNKP-212ENST00000599454 OR5L1Q8NGL2 311 aa17.74■□□□□ 0.43
PNKP-212ENST00000599454 OR13C2Q8NGS9 318 aa17.74■□□□□ 0.43
PNKP-212ENST00000599454 OR13G1Q8NGZ3 307 aa17.74■□□□□ 0.43
PNKP-212ENST00000599454 ACOT11Q8WXI4 607 aaPredicted RBP17.74■□□□□ 0.43
PNKP-212ENST00000599454 RASD2Q96D21 266 aa17.74■□□□□ 0.43
PNKP-212ENST00000599454 MMP24Q9Y5R2 645 aa17.74■□□□□ 0.43
PNKP-212ENST00000599454 TGP01266 2768 aa17.74■□□□□ 0.43
PNKP-212ENST00000599454 IGHV2-70DA0A0C4DH43 119 aa17.73■□□□□ 0.43
PNKP-212ENST00000599454 PRSS37A4D1T9 235 aa17.73■□□□□ 0.43
PNKP-212ENST00000599454 OR6C6A6NF89 314 aa17.73■□□□□ 0.43
PNKP-212ENST00000599454 HMGB1P1B2RPK0 211 aaPredicted RBP17.73■□□□□ 0.43
PNKP-212ENST00000599454 IFNW1P05000 195 aa17.73■□□□□ 0.43
PNKP-212ENST00000599454 IGHV4-38-2P0DP08 117 aa17.73■□□□□ 0.43
PNKP-212ENST00000599454 RBMXP38159 391 aaKnown RBP17.73■□□□□ 0.43
PNKP-212ENST00000599454 SRP9P49458 86 aaKnown RBP17.73■□□□□ 0.43
PNKP-212ENST00000599454 GNB2P62879 340 aa17.73■□□□□ 0.43
PNKP-212ENST00000599454 FBXW12Q6X9E4 464 aa17.73■□□□□ 0.43
PNKP-212ENST00000599454 KLBQ86Z14 1044 aa17.73■□□□□ 0.43
PNKP-212ENST00000599454 OR2T12Q8NG77 320 aa17.73■□□□□ 0.43
PNKP-212ENST00000599454 OR1F12Q8NHA8 337 aa17.73■□□□□ 0.43
PNKP-212ENST00000599454 RAB40AQ8WXH6 277 aa17.73■□□□□ 0.43
PNKP-212ENST00000599454 TMEM165Q9HC07 324 aa17.73■□□□□ 0.43
PNKP-212ENST00000599454 GID8Q9NWU2 228 aa17.73■□□□□ 0.43
PNKP-212ENST00000599454 ZNF181Q2M3W8 571 aa17.72■□□□□ 0.43
PNKP-212ENST00000599454 MESTQ5EB52 335 aa17.72■□□□□ 0.43
PNKP-212ENST00000599454 C1orf94Q6P1W5 598 aa17.72■□□□□ 0.43
PNKP-212ENST00000599454 C16orf87Q6PH81 154 aa17.72■□□□□ 0.43
PNKP-212ENST00000599454 ZNF730Q6ZMV8 503 aa17.72■□□□□ 0.43
PNKP-212ENST00000599454 TMPRSS11FQ6ZWK6 438 aa17.72■□□□□ 0.43
PNKP-212ENST00000599454 NLRC3Q7RTR2 1065 aa17.72■□□□□ 0.43
PNKP-212ENST00000599454 FAM122BQ7Z309 247 aa17.72■□□□□ 0.43
PNKP-212ENST00000599454 OR8G5Q8NG78 346 aa17.72■□□□□ 0.43
PNKP-212ENST00000599454 DACT3Q96B18 629 aaPredicted RBP17.72■□□□□ 0.43
PNKP-212ENST00000599454 NEIL1Q96FI4 390 aaPredicted RBP17.72■□□□□ 0.43
PNKP-212ENST00000599454 MEGF10Q96KG7 1140 aa17.72■□□□□ 0.43
PNKP-212ENST00000599454 Q96M85 177 aa17.72■□□□□ 0.43
PNKP-212ENST00000599454 ZNF570Q96NI8 536 aa17.72■□□□□ 0.43
PNKP-212ENST00000599454 AP3M1Q9Y2T2 418 aa17.72■□□□□ 0.43
PNKP-212ENST00000599454 ADAM18Q9Y3Q7 739 aa17.72■□□□□ 0.43
PNKP-212ENST00000599454 A0A1B0GUS0 222 aa17.71■□□□□ 0.43
PNKP-212ENST00000599454 ELOVL7A1L3X0 281 aa17.71■□□□□ 0.43
PNKP-212ENST00000599454 LRRC30A6NM36 301 aa17.71■□□□□ 0.43
PNKP-212ENST00000599454 CTLA4P16410 223 aa17.71■□□□□ 0.43
PNKP-212ENST00000599454 YAP1P46937 504 aaKnown RBP17.71■□□□□ 0.43
PNKP-212ENST00000599454 ERFP50548 548 aa17.71■□□□□ 0.43
PNKP-212ENST00000599454 DEFA6Q01524 100 aa17.71■□□□□ 0.43
PNKP-212ENST00000599454 OCLNQ16625 522 aa17.71■□□□□ 0.43
PNKP-212ENST00000599454 ZBED5Q49AG3 693 aa17.71■□□□□ 0.43
PNKP-212ENST00000599454 MBOAT2Q6ZWT7 520 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms