RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 RHOXF1Q8NHV9 184 aa11.97□□□□□ -0.49
SHKBP1-218ENST00000598907 FAM81AQ8TBF8 368 aa11.97□□□□□ -0.49
SHKBP1-218ENST00000598907 TMEM163Q8TC26 289 aa11.97□□□□□ -0.49
SHKBP1-218ENST00000598907 PTP4A1Q93096 173 aa11.97□□□□□ -0.49
SHKBP1-218ENST00000598907 TMEM54Q969K7 222 aa11.97□□□□□ -0.49
SHKBP1-218ENST00000598907 LRR1Q96L50 414 aa11.97□□□□□ -0.49
SHKBP1-218ENST00000598907 NMNAT3Q96T66 252 aa11.97□□□□□ -0.49
SHKBP1-218ENST00000598907 APOL4Q9BPW4 351 aa11.97□□□□□ -0.49
SHKBP1-218ENST00000598907 ALG12Q9BV10 488 aa11.97□□□□□ -0.49
SHKBP1-218ENST00000598907 NARFLQ9H6Q4 476 aa11.97□□□□□ -0.49
SHKBP1-218ENST00000598907 UNKLQ9H9P5 680 aaKnown RBP11.97□□□□□ -0.49
SHKBP1-218ENST00000598907 NOSIPQ9Y314 301 aaKnown RBP11.97□□□□□ -0.49
SHKBP1-218ENST00000598907 SPEF1Q9Y4P9 236 aa11.97□□□□□ -0.49
SHKBP1-218ENST00000598907 LOC105371242A0A075B767 164 aa11.96□□□□□ -0.49
SHKBP1-218ENST00000598907 SLC22A23A1A5C7 686 aa11.96□□□□□ -0.49
SHKBP1-218ENST00000598907 ZNF726A6NNF4 738 aa11.96□□□□□ -0.49
SHKBP1-218ENST00000598907 B4DSR2 109 aa11.96□□□□□ -0.49
SHKBP1-218ENST00000598907 MRPL33O75394 65 aaKnown RBP11.96□□□□□ -0.49
SHKBP1-218ENST00000598907 IFNGP01579 166 aa11.96□□□□□ -0.49
SHKBP1-218ENST00000598907 IGHG1P01857 330 aa11.96□□□□□ -0.49
SHKBP1-218ENST00000598907 DAOP14920 347 aa11.96□□□□□ -0.49
SHKBP1-218ENST00000598907 UBA52P62987 128 aaKnown RBP11.96□□□□□ -0.49
SHKBP1-218ENST00000598907 CAMK2DQ13557 499 aa11.96□□□□□ -0.49
SHKBP1-218ENST00000598907 CRMP1Q14194 572 aa11.96□□□□□ -0.49
SHKBP1-218ENST00000598907 AADACL4Q5VUY2 407 aa11.96□□□□□ -0.49
SHKBP1-218ENST00000598907 NIPAL3Q6P499 406 aa11.96□□□□□ -0.49
SHKBP1-218ENST00000598907 SETD9Q8NE22 299 aa11.96□□□□□ -0.49
SHKBP1-218ENST00000598907 SDR9C7Q8NEX9 313 aa11.96□□□□□ -0.49
SHKBP1-218ENST00000598907 ZNF566Q969W8 418 aa11.96□□□□□ -0.49
SHKBP1-218ENST00000598907 TMEM186Q96B77 213 aa11.96□□□□□ -0.49
SHKBP1-218ENST00000598907 SUCNR1Q9BXA5 334 aa11.96□□□□□ -0.49
SHKBP1-218ENST00000598907 LINC00470Q9BZP3 86 aa11.96□□□□□ -0.49
SHKBP1-218ENST00000598907 HINT3Q9NQE9 182 aaKnown RBP11.96□□□□□ -0.49
SHKBP1-218ENST00000598907 MOKQ9UQ07 419 aa11.96□□□□□ -0.49
SHKBP1-218ENST00000598907 GRIP1Q9Y3R0 1128 aa11.96□□□□□ -0.49
SHKBP1-218ENST00000598907 PPIAL4AQ9Y536 164 aa11.96□□□□□ -0.49
SHKBP1-218ENST00000598907 WNK1Q9H4A3 2382 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 OR6C65A6NJZ3 312 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 RIIAD1A6NNX1 92 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 M0R129 80 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 XKRYO14609 159 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 MPZL2O60487 215 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 SLC43A1O75387 559 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 HKR1P10072 659 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 ZNF3P17036 446 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 GIFP27352 417 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 SLC25A1P53007 311 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 TEKQ02763 1124 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 CD47Q08722 323 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 MAD2L1BPQ15013 274 aaPredicted RBP11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 OCLNQ16625 522 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 PHYHD1Q5SRE7 291 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 THEM4Q5T1C6 240 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 FAHD2BQ6P2I3 314 aaPredicted RBP11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 LEG1Q6P5S2 330 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 JAZF1Q86VZ6 243 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 C8orf59Q8N0T1 100 aaPredicted RBP11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 ZDHHC22Q8N966 263 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 NOXO1Q8NFA2 376 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 FNDC8Q8TC99 324 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 APH1BQ8WW43 257 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 FAHD2AQ96GK7 314 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 PLEKHA8Q96JA3 519 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 IL4I1Q96RQ9 567 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 HCAR1Q9BXC0 346 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 C1QTNF5Q9BXJ0 243 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 IMPAD1Q9NX62 359 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 GLTPQ9NZD2 209 aa11.95□□□□□ -0.5
SHKBP1-218ENST00000598907 FAM183AA6NL82 134 aa11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 PRR23D1E9PI22 279 aaPredicted RBP11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 H7C1C5 153 aa11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 WBP4O75554 376 aaKnown RBP11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 UPK3AO75631 287 aa11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 RENP00797 406 aa11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 PRR23D2P0DMB1 279 aaPredicted RBP11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 SLC2A5P22732 501 aa11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 CSNK1A1P48729 337 aa11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 LCN6P62502 163 aa11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 C10orf128Q5T292 105 aa11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 TSPO2Q5TGU0 170 aa11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 NXNL2Q5VZ03 156 aa11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 LAIR2Q6ISS4 152 aa11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 LRFN4Q6PJG9 635 aa11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 SLC25A47Q6Q0C1 308 aa11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 VHLLQ6RSH7 139 aa11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 THAP5Q7Z6K1 395 aa11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 ZBTB46Q86UZ6 589 aa11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 CPOQ8IVL8 374 aa11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 BPIFB2Q8N4F0 458 aa11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 CYB561A3Q8NBI2 242 aa11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 MCHR2Q969V1 340 aa11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 APH1AQ96BI3 265 aa11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 RBP7Q96R05 134 aa11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 NUAK2Q9H093 628 aa11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 SYT4Q9H2B2 425 aa11.94□□□□□ -0.5
SHKBP1-218ENST00000598907 IGLV1-36A0A0B4J1U3 117 aa11.93□□□□□ -0.5
SHKBP1-218ENST00000598907 IGKV1D-43A0A0B4J1Z2 117 aa11.93□□□□□ -0.5
SHKBP1-218ENST00000598907 LYNX1G3V0Z9 82 aa11.93□□□□□ -0.5
SHKBP1-218ENST00000598907 RPL36A-HNRNPH2H7BZ11 118 aa11.93□□□□□ -0.5
SHKBP1-218ENST00000598907 DCTN6O00399 190 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms