RNA–Protein interactions for RNA: ENST00000598256.1

LTBP4-222, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-222	ENST00000598256	MRPL48	Q96GC5	212 aa	Known RBP	13.88	□□□□□ -0.19
LTBP4-222	ENST00000598256	MAP6	Q96JE9	813 aa		13.88	□□□□□ -0.19
LTBP4-222	ENST00000598256	ABHD6	Q9BV23	337 aa		13.88	□□□□□ -0.19
LTBP4-222	ENST00000598256	HDHD2	Q9H0R4	259 aa		13.88	□□□□□ -0.19
LTBP4-222	ENST00000598256	FKBP14	Q9NWM8	211 aa		13.88	□□□□□ -0.19
LTBP4-222	ENST00000598256	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	13.88	□□□□□ -0.19
LTBP4-222	ENST00000598256	NDRG3	Q9UGV2	375 aa		13.88	□□□□□ -0.19
LTBP4-222	ENST00000598256	IKZF2	Q9UKS7	526 aa		13.88	□□□□□ -0.19
LTBP4-222	ENST00000598256	DIMT1	Q9UNQ2	313 aa	Known RBP	13.88	□□□□□ -0.19
LTBP4-222	ENST00000598256	SLC25A15	Q9Y619	301 aa		13.88	□□□□□ -0.19
LTBP4-222	ENST00000598256	ABCA12	Q86UK0	2595 aa		13.88	□□□□□ -0.19
LTBP4-222	ENST00000598256	IQCM	A0A1B0GVH7	501 aa		13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256		A0A1W2PQL4	384 aa	Predicted RBP	13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	WIPF3	A6NGB9	483 aa		13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	ZNF878	C9JN71	531 aa		13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	RGS10	O43665	173 aa		13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	TNFAIP8	O95379	198 aa		13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	CDK1	P06493	297 aa		13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	IDH3G	P51553	393 aa	Predicted RBP	13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	PSG4	Q00888	419 aa		13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	SNTB1	Q13884	538 aa	Known RBP	13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	TAF13	Q15543	124 aa		13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	ELFN2	Q5R3F8	820 aa		13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	ZNF774	Q6NX45	483 aa		13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	KCTD18	Q6PI47	426 aa	Predicted RBP	13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	ZNF322	Q6U7Q0	402 aa	Predicted RBP	13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	SSX8	Q7RTT4	187 aa		13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	WFDC8	Q8IUA0	241 aa		13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	ST7L	Q8TDW4	575 aa		13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	ASB17	Q8WXJ9	295 aa		13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	HSD17B8	Q92506	261 aa		13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	AMELY	Q99218	206 aa		13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	C1QTNF6	Q9BXI9	259 aa		13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	CCDC90B	Q9GZT6	254 aa		13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	WNT5B	Q9H1J7	359 aa		13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	MOV10	Q9HCE1	1003 aa	Known RBP	13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	INPP5E	Q9NRR6	644 aa		13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	CENPM	Q9NSP4	180 aa		13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	CHCHD3	Q9NX63	227 aa	Known RBP	13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	B3GNT2	Q9NY97	397 aa		13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	FBXL3	Q9UKT7	428 aa		13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	EXOSC1	Q9Y3B2	195 aa	Known RBP	13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	HEATR1	Q9H583	2144 aa	Known RBP	13.87	□□□□□ -0.19
LTBP4-222	ENST00000598256	TUBAL3	A6NHL2	446 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256		J3QRE1	110 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	PSMD9	O00233	223 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	CBR1	P16152	277 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	PAX7	P23759	505 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	PEX19	P40855	299 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	HTR5A	P47898	357 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	HIST1H3A	P68431	136 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	ZNF85	Q03923	595 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	RAB39A	Q14964	217 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	KCTD21	Q4G0X4	260 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	CCDC92	Q53HC0	331 aa	Predicted RBP	13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	HIST2H3PS2	Q5TEC6	136 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	LRRN1	Q6UXK5	716 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	HIST2H3A	Q71DI3	136 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	VASH1	Q7L8A9	365 aa	Predicted RBP	13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	SSX6	Q7RTT6	188 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	FAM220A	Q7Z4H9	259 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	KRT77	Q7Z794	578 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	LHFPL3	Q86UP9	236 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	OR10S1	Q8NGN2	331 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	SNX33	Q8WV41	574 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	SGCD	Q92629	289 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	MYCBP	Q99417	103 aa	Predicted RBP	13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	ATF6B	Q99941	703 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	ALG8	Q9BVK2	526 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	JAM3	Q9BX67	310 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	DUSP21	Q9H596	190 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	ERVK13-1	Q9NX77	482 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	ERVK-18	Q9QC07	812 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256	DOPEY1	Q5JWR5	2465 aa		13.86	□□□□□ -0.19
LTBP4-222	ENST00000598256		M0R1B8	84 aa		13.85	□□□□□ -0.19
LTBP4-222	ENST00000598256	MYL12B	O14950	172 aa		13.85	□□□□□ -0.19
LTBP4-222	ENST00000598256	PTH	P01270	115 aa		13.85	□□□□□ -0.19
LTBP4-222	ENST00000598256	KRT8	P05787	483 aa		13.85	□□□□□ -0.19
LTBP4-222	ENST00000598256	H2BFM	P0C1H6	154 aa		13.85	□□□□□ -0.19
LTBP4-222	ENST00000598256	HSD11B1	P28845	292 aa		13.85	□□□□□ -0.19
LTBP4-222	ENST00000598256	C21orf33	P30042	268 aa	Predicted RBP	13.85	□□□□□ -0.19
LTBP4-222	ENST00000598256	APLNR	P35414	380 aa		13.85	□□□□□ -0.19
LTBP4-222	ENST00000598256	ZNF83	P51522	516 aa		13.85	□□□□□ -0.19
LTBP4-222	ENST00000598256	ACTA2	P62736	377 aa		13.85	□□□□□ -0.19
LTBP4-222	ENST00000598256	ACTG2	P63267	376 aa		13.85	□□□□□ -0.19
LTBP4-222	ENST00000598256	MVK	Q03426	396 aa		13.85	□□□□□ -0.19
LTBP4-222	ENST00000598256	EGR3	Q06889	387 aa		13.85	□□□□□ -0.19
LTBP4-222	ENST00000598256	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	13.85	□□□□□ -0.19
LTBP4-222	ENST00000598256	OR1F12	Q8NHA8	337 aa		13.85	□□□□□ -0.19
LTBP4-222	ENST00000598256	LINC01560	Q8TB33	94 aa		13.85	□□□□□ -0.19
LTBP4-222	ENST00000598256	RNF133	Q8WVZ7	376 aa		13.85	□□□□□ -0.19
LTBP4-222	ENST00000598256	WFIKKN1	Q96NZ8	548 aa		13.85	□□□□□ -0.19
LTBP4-222	ENST00000598256	OR8B4	Q96RC9	309 aa		13.85	□□□□□ -0.19
LTBP4-222	ENST00000598256	NR1H4	Q96RI1	486 aa	Predicted RBP	13.85	□□□□□ -0.19
LTBP4-222	ENST00000598256	COQ7	Q99807	217 aa		13.85	□□□□□ -0.19
LTBP4-222	ENST00000598256	MRO	Q9BYG7	248 aa		13.85	□□□□□ -0.19
LTBP4-222	ENST00000598256	NGB	Q9NPG2	151 aa		13.85	□□□□□ -0.19
LTBP4-222	ENST00000598256	PNRC2	Q9NPJ4	139 aa	Known RBP	13.85	□□□□□ -0.19
LTBP4-222	ENST00000598256	SNX5	Q9Y5X3	404 aa		13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms