RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 TRAPPC2LH3BP13 241 aa14.32□□□□□ -0.12
PNKP-210ENST00000597965 SGCEO43556 437 aa14.32□□□□□ -0.12
PNKP-210ENST00000597965 HTR5AP47898 357 aa14.32□□□□□ -0.12
PNKP-210ENST00000597965 ENDOGQ14249 297 aaKnown RBP14.32□□□□□ -0.12
PNKP-210ENST00000597965 MAPRE2Q15555 327 aa14.32□□□□□ -0.12
PNKP-210ENST00000597965 CALHM3Q86XJ0 350 aa14.32□□□□□ -0.12
PNKP-210ENST00000597965 RNF113BQ8IZP6 322 aaKnown RBP14.32□□□□□ -0.12
PNKP-210ENST00000597965 OR52E2Q8NGJ4 325 aa14.32□□□□□ -0.12
PNKP-210ENST00000597965 OR5L1Q8NGL2 311 aa14.32□□□□□ -0.12
PNKP-210ENST00000597965 HAVCR1Q96D42 359 aa14.32□□□□□ -0.12
PNKP-210ENST00000597965 PLEKHA8Q96JA3 519 aa14.32□□□□□ -0.12
PNKP-210ENST00000597965 SLITRK2Q9H156 845 aa14.32□□□□□ -0.12
PNKP-210ENST00000597965 UNKLQ9H9P5 680 aaKnown RBP14.32□□□□□ -0.12
PNKP-210ENST00000597965 LRRC30A6NM36 301 aa14.31□□□□□ -0.12
PNKP-210ENST00000597965 F5H0A9 414 aaPredicted RBP14.31□□□□□ -0.12
PNKP-210ENST00000597965 RAC2P15153 192 aa14.31□□□□□ -0.12
PNKP-210ENST00000597965 TNFRSF1BP20333 461 aa14.31□□□□□ -0.12
PNKP-210ENST00000597965 RGS6P49758 472 aa14.31□□□□□ -0.12
PNKP-210ENST00000597965 SELENOWP63302 87 aa14.31□□□□□ -0.12
PNKP-210ENST00000597965 AQP6Q13520 282 aa14.31□□□□□ -0.12
PNKP-210ENST00000597965 LRRC23Q53EV4 343 aaPredicted RBP14.31□□□□□ -0.12
PNKP-210ENST00000597965 CYBRD1Q53TN4 286 aa14.31□□□□□ -0.12
PNKP-210ENST00000597965 RABL3Q5HYI8 236 aa14.31□□□□□ -0.12
PNKP-210ENST00000597965 TREML4Q6UXN2 200 aa14.31□□□□□ -0.12
PNKP-210ENST00000597965 C9orf139Q6ZV77 190 aa14.31□□□□□ -0.12
PNKP-210ENST00000597965 PCYOX1LQ8NBM8 494 aa14.31□□□□□ -0.12
PNKP-210ENST00000597965 FAM156AQ8NDB6 213 aa14.31□□□□□ -0.12
PNKP-210ENST00000597965 OR51A7Q8NH64 312 aa14.31□□□□□ -0.12
PNKP-210ENST00000597965 CMBLQ96DG6 245 aa14.31□□□□□ -0.12
PNKP-210ENST00000597965 TPD52L3Q96J77 140 aa14.31□□□□□ -0.12
PNKP-210ENST00000597965 OR2V2Q96R30 315 aa14.31□□□□□ -0.12
PNKP-210ENST00000597965 FNDC11Q9BVV2 318 aa14.31□□□□□ -0.12
PNKP-210ENST00000597965 SSBP3Q9BWW4 388 aaPredicted RBP14.31□□□□□ -0.12
PNKP-210ENST00000597965 SAR1AQ9NR31 198 aa14.31□□□□□ -0.12
PNKP-210ENST00000597965 GID8Q9NWU2 228 aa14.31□□□□□ -0.12
PNKP-210ENST00000597965 MIOXQ9UGB7 285 aa14.31□□□□□ -0.12
PNKP-210ENST00000597965 ATPIF1Q9UII2 106 aa14.31□□□□□ -0.12
PNKP-210ENST00000597965 AP3M1Q9Y2T2 418 aa14.31□□□□□ -0.12
PNKP-210ENST00000597965 A0A1B0GUS0 222 aa14.3□□□□□ -0.12
PNKP-210ENST00000597965 EFCAB9A8MZ26 197 aa14.3□□□□□ -0.12
PNKP-210ENST00000597965 TMEM178BH3BS89 294 aa14.3□□□□□ -0.12
PNKP-210ENST00000597965 KCNAB3O43448 404 aa14.3□□□□□ -0.12
PNKP-210ENST00000597965 CCDC22O60826 627 aa14.3□□□□□ -0.12
PNKP-210ENST00000597965 FSTL3O95633 263 aa14.3□□□□□ -0.12
PNKP-210ENST00000597965 T-ENOLP0DO92 83 aa14.3□□□□□ -0.12
PNKP-210ENST00000597965 KDELR2P33947 212 aa14.3□□□□□ -0.12
PNKP-210ENST00000597965 RPL4P36578 427 aaKnown RBP14.3□□□□□ -0.12
PNKP-210ENST00000597965 SRP9P49458 86 aaKnown RBP14.3□□□□□ -0.12
PNKP-210ENST00000597965 BPIFB3P59826 476 aa14.3□□□□□ -0.12
PNKP-210ENST00000597965 PRKCDQ05655 676 aa14.3□□□□□ -0.12
PNKP-210ENST00000597965 PAX8Q06710 450 aa14.3□□□□□ -0.12
PNKP-210ENST00000597965 KRT72Q14CN4 511 aa14.3□□□□□ -0.12
PNKP-210ENST00000597965 TRAM2Q15035 370 aa14.3□□□□□ -0.12
PNKP-210ENST00000597965 ZMYND11Q15326 602 aa14.3□□□□□ -0.12
PNKP-210ENST00000597965 KLF17Q5JT82 389 aaPredicted RBP14.3□□□□□ -0.12
PNKP-210ENST00000597965 RRM2BQ7LG56 351 aa14.3□□□□□ -0.12
PNKP-210ENST00000597965 NLRC3Q7RTR2 1065 aa14.3□□□□□ -0.12
PNKP-210ENST00000597965 OFCC1Q8IZS5 231 aa14.3□□□□□ -0.12
PNKP-210ENST00000597965 C1orf87Q8N0U7 546 aa14.3□□□□□ -0.12
PNKP-210ENST00000597965 CLDN22Q8N7P3 220 aa14.3□□□□□ -0.12
PNKP-210ENST00000597965 OR13G1Q8NGZ3 307 aa14.3□□□□□ -0.12
PNKP-210ENST00000597965 SIGLEC11Q96RL6 698 aa14.3□□□□□ -0.12
PNKP-210ENST00000597965 GCM1Q9NP62 436 aa14.3□□□□□ -0.12
PNKP-210ENST00000597965 A4GNTQ9UNA3 340 aa14.3□□□□□ -0.12
PNKP-210ENST00000597965 PKD1L1Q8TDX9 2849 aa14.29□□□□□ -0.12
PNKP-210ENST00000597965 TRAV27A0A087WT01 109 aa14.29□□□□□ -0.12
PNKP-210ENST00000597965 FBP2O00757 339 aa14.29□□□□□ -0.12
PNKP-210ENST00000597965 PIP5K1CO60331 668 aa14.29□□□□□ -0.12
PNKP-210ENST00000597965 ATP5HO75947 161 aa14.29□□□□□ -0.12
PNKP-210ENST00000597965 IFNW1P05000 195 aa14.29□□□□□ -0.12
PNKP-210ENST00000597965 RPS2P15880 293 aaKnown RBP14.29□□□□□ -0.12
PNKP-210ENST00000597965 LSM6P62312 80 aaKnown RBP14.29□□□□□ -0.12
PNKP-210ENST00000597965 GNB2P62879 340 aa14.29□□□□□ -0.12
PNKP-210ENST00000597965 SPRNQ5BIV9 151 aa14.29□□□□□ -0.12
PNKP-210ENST00000597965 LEG1Q6P5S2 330 aa14.29□□□□□ -0.12
PNKP-210ENST00000597965 VASH1Q7L8A9 365 aaPredicted RBP14.29□□□□□ -0.12
PNKP-210ENST00000597965 IGFN1Q86VF2 1251 aa14.29□□□□□ -0.12
PNKP-210ENST00000597965 NRMQ8IXM6 262 aa14.29□□□□□ -0.12
PNKP-210ENST00000597965 PARP8Q8N3A8 854 aa14.29□□□□□ -0.12
PNKP-210ENST00000597965 ATG16L2Q8NAA4 619 aa14.29□□□□□ -0.12
PNKP-210ENST00000597965 LRRC75AQ8NAA5 344 aa14.29□□□□□ -0.12
PNKP-210ENST00000597965 OR2T12Q8NG77 320 aa14.29□□□□□ -0.12
PNKP-210ENST00000597965 ITLN1Q8WWA0 313 aa14.29□□□□□ -0.12
PNKP-210ENST00000597965 RASD2Q96D21 266 aa14.29□□□□□ -0.12
PNKP-210ENST00000597965 ZNF583Q96ND8 569 aa14.29□□□□□ -0.12
PNKP-210ENST00000597965 ZNF582Q96NG8 517 aaPredicted RBP14.29□□□□□ -0.12
PNKP-210ENST00000597965 DUX5Q96PT3 197 aa14.29□□□□□ -0.12
PNKP-210ENST00000597965 TEX13CA0A0J9YWL9 993 aa14.28□□□□□ -0.12
PNKP-210ENST00000597965 PRSS37A4D1T9 235 aa14.28□□□□□ -0.12
PNKP-210ENST00000597965 CEACAM18A8MTB9 384 aa14.28□□□□□ -0.12
PNKP-210ENST00000597965 FAM220BPB1ANY3 271 aa14.28□□□□□ -0.12
PNKP-210ENST00000597965 MRASO14807 208 aa14.28□□□□□ -0.12
PNKP-210ENST00000597965 DNAJC8O75937 253 aaPredicted RBP14.28□□□□□ -0.12
PNKP-210ENST00000597965 CD14P08571 375 aa14.28□□□□□ -0.12
PNKP-210ENST00000597965 WNT2P09544 360 aa14.28□□□□□ -0.12
PNKP-210ENST00000597965 MMP16P51512 607 aa14.28□□□□□ -0.12
PNKP-210ENST00000597965 SEC61A1P61619 476 aaKnown RBP14.28□□□□□ -0.12
PNKP-210ENST00000597965 SLC9A3R2Q15599 337 aa14.28□□□□□ -0.12
PNKP-210ENST00000597965 ZNF181Q2M3W8 571 aa14.28□□□□□ -0.12
PNKP-210ENST00000597965 ZNF730Q6ZMV8 503 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms