RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 SETD9Q8NE22 299 aa12.43□□□□□ -0.42
VRK3-213ENST00000597215 OR1F12Q8NHA8 337 aa12.43□□□□□ -0.42
VRK3-213ENST00000597215 NEUROG1Q92886 237 aa12.43□□□□□ -0.42
VRK3-213ENST00000597215 UBE2FQ969M7 185 aa12.43□□□□□ -0.42
VRK3-213ENST00000597215 FBXW5Q969U6 566 aa12.43□□□□□ -0.42
VRK3-213ENST00000597215 POM121L2Q96KW2 1035 aa12.43□□□□□ -0.42
VRK3-213ENST00000597215 CNN2Q99439 309 aaKnown RBP12.43□□□□□ -0.42
VRK3-213ENST00000597215 COQ7Q99807 217 aa12.43□□□□□ -0.42
VRK3-213ENST00000597215 PLEKHF2Q9H8W4 249 aa12.43□□□□□ -0.42
VRK3-213ENST00000597215 UBTD1Q9HAC8 227 aa12.43□□□□□ -0.42
VRK3-213ENST00000597215 HAO2Q9NYQ3 351 aa12.43□□□□□ -0.42
VRK3-213ENST00000597215 WARS2Q9UGM6 360 aaKnown RBP12.43□□□□□ -0.42
VRK3-213ENST00000597215 CACNA1DQ01668 2161 aa12.43□□□□□ -0.42
VRK3-213ENST00000597215 PLCE1Q9P212 2302 aa12.43□□□□□ -0.42
VRK3-213ENST00000597215 HRNRQ86YZ3 2850 aaPredicted RBP12.42□□□□□ -0.42
VRK3-213ENST00000597215 LOC100509620A0A075B734 347 aa12.42□□□□□ -0.42
VRK3-213ENST00000597215 SNTNA6NMZ2 147 aa12.42□□□□□ -0.42
VRK3-213ENST00000597215 ENTPD6O75354 484 aa12.42□□□□□ -0.42
VRK3-213ENST00000597215 PSKH1P11801 424 aa12.42□□□□□ -0.42
VRK3-213ENST00000597215 CCL2P13500 99 aa12.42□□□□□ -0.42
VRK3-213ENST00000597215 GABRB1P18505 474 aa12.42□□□□□ -0.42
VRK3-213ENST00000597215 CCNOP22674 350 aa12.42□□□□□ -0.42
VRK3-213ENST00000597215 PCSK6P29122 969 aa12.42□□□□□ -0.42
VRK3-213ENST00000597215 AQP4P55087 323 aa12.42□□□□□ -0.42
VRK3-213ENST00000597215 POU4F2Q12837 409 aa12.42□□□□□ -0.42
VRK3-213ENST00000597215 ECH1Q13011 328 aa12.42□□□□□ -0.42
VRK3-213ENST00000597215 SNTB2Q13425 540 aaKnown RBP12.42□□□□□ -0.42
VRK3-213ENST00000597215 IL18R1Q13478 541 aa12.42□□□□□ -0.42
VRK3-213ENST00000597215 EIF2B1Q14232 305 aaKnown RBP12.42□□□□□ -0.42
VRK3-213ENST00000597215 ZNF691Q5VV52 312 aa12.42□□□□□ -0.42
VRK3-213ENST00000597215 SLC16A9Q7RTY1 509 aa12.42□□□□□ -0.42
VRK3-213ENST00000597215 PAQR4Q8N4S7 273 aaPredicted RBP12.42□□□□□ -0.42
VRK3-213ENST00000597215 NUP37Q8NFH4 326 aa12.42□□□□□ -0.42
VRK3-213ENST00000597215 LILRB1Q8NHL6 650 aaPredicted RBP12.42□□□□□ -0.42
VRK3-213ENST00000597215 RHOXF1Q8NHV9 184 aa12.42□□□□□ -0.42
VRK3-213ENST00000597215 MAP6Q96JE9 813 aa12.42□□□□□ -0.42
VRK3-213ENST00000597215 Q96MT0 163 aa12.42□□□□□ -0.42
VRK3-213ENST00000597215 ATF6BQ99941 703 aa12.42□□□□□ -0.42
VRK3-213ENST00000597215 YIPF3Q9GZM5 350 aa12.42□□□□□ -0.42
VRK3-213ENST00000597215 CLN6Q9NWW5 311 aa12.42□□□□□ -0.42
VRK3-213ENST00000597215 CISD1Q9NZ45 108 aaKnown RBP12.42□□□□□ -0.42
VRK3-213ENST00000597215 EIF3KQ9UBQ5 218 aaKnown RBP12.42□□□□□ -0.42
VRK3-213ENST00000597215 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.42□□□□□ -0.42
VRK3-213ENST00000597215 RAI1Q7Z5J4 1906 aaPredicted RBP12.42□□□□□ -0.42
VRK3-213ENST00000597215 FBN2P35556 2912 aa12.42□□□□□ -0.42
VRK3-213ENST00000597215 RTTNQ86VV8 2226 aa12.42□□□□□ -0.42
VRK3-213ENST00000597215 NAV2Q8IVL1 2488 aa12.42□□□□□ -0.42
VRK3-213ENST00000597215 E7EQL1 145 aa12.41□□□□□ -0.42
VRK3-213ENST00000597215 CLIC3O95833 236 aa12.41□□□□□ -0.42
VRK3-213ENST00000597215 MRPL3P09001 348 aaKnown RBP12.41□□□□□ -0.42
VRK3-213ENST00000597215 NR4A1P22736 598 aa12.41□□□□□ -0.42
VRK3-213ENST00000597215 KRTAP10-9P60411 292 aa12.41□□□□□ -0.42
VRK3-213ENST00000597215 RPS23P62266 143 aaKnown RBP12.41□□□□□ -0.42
VRK3-213ENST00000597215 IL5RAQ01344 420 aa12.41□□□□□ -0.42
VRK3-213ENST00000597215 HGFACQ04756 655 aa12.41□□□□□ -0.42
VRK3-213ENST00000597215 MAD2L1BPQ15013 274 aaPredicted RBP12.41□□□□□ -0.42
VRK3-213ENST00000597215 KRT80Q6KB66 452 aa12.41□□□□□ -0.42
VRK3-213ENST00000597215 ARL9Q6T311 187 aa12.41□□□□□ -0.42
VRK3-213ENST00000597215 UNQ6126/PRO20091Q6UXV3 157 aa12.41□□□□□ -0.42
VRK3-213ENST00000597215 C20orf204Q6ZNR8 217 aa12.41□□□□□ -0.42
VRK3-213ENST00000597215 ZNF611Q8N823 705 aa12.41□□□□□ -0.42
VRK3-213ENST00000597215 OTOSQ8NHW6 89 aa12.41□□□□□ -0.42
VRK3-213ENST00000597215 ST7LQ8TDW4 575 aa12.41□□□□□ -0.42
VRK3-213ENST00000597215 IPCEF1Q8WWN9 437 aaPredicted RBP12.41□□□□□ -0.42
VRK3-213ENST00000597215 SLAMF6Q96DU3 332 aa12.41□□□□□ -0.42
VRK3-213ENST00000597215 DCLRE1CQ96SD1 692 aaKnown RBP12.41□□□□□ -0.42
VRK3-213ENST00000597215 MNTQ99583 582 aa12.41□□□□□ -0.42
VRK3-213ENST00000597215 DHRS9Q9BPW9 319 aa12.41□□□□□ -0.42
VRK3-213ENST00000597215 PNRC2Q9NPJ4 139 aaKnown RBP12.41□□□□□ -0.42
VRK3-213ENST00000597215 CA10Q9NS85 328 aa12.41□□□□□ -0.42
VRK3-213ENST00000597215 DDX28Q9NUL7 540 aaKnown RBP12.41□□□□□ -0.42
VRK3-213ENST00000597215 TMEM14AQ9Y6G1 99 aa12.41□□□□□ -0.42
VRK3-213ENST00000597215 VSTM5A8MXK1 200 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 ZNF878C9JN71 531 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 ABHD16AO95870 558 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 LYNP07948 512 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 SBK2P0C263 348 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 VHLP40337 213 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 RAD52P43351 418 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 MTNR1AP48039 350 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 HSPA13P48723 471 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 NUDT6P53370 316 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 NKX6-1P78426 367 aaPredicted RBP12.4□□□□□ -0.42
VRK3-213ENST00000597215 TAF13Q15543 124 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 ZNF544Q6NX49 715 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 VHLLQ6RSH7 139 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 IZUMO2Q6UXV1 221 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 C8orf59Q8N0T1 100 aaPredicted RBP12.4□□□□□ -0.42
VRK3-213ENST00000597215 OR51G2Q8NGK0 314 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 OR10S1Q8NGN2 331 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 THEM6Q8WUY1 208 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 TFAP2CQ92754 450 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 LURAP1Q96LR2 239 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 COPS4Q9BT78 406 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 ABHD6Q9BV23 337 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 BCL2L14Q9BZR8 327 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 ZNF442Q9H7R0 627 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 ELOVL3Q9HB03 270 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 ADGRL4Q9HBW9 690 aa12.4□□□□□ -0.42
VRK3-213ENST00000597215 CENPMQ9NSP4 180 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms