RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 C1orf21Q9H246 121 aa8.96□□□□□ -0.98
CCDC9-203ENST00000596938 SRA1Q9HD15 236 aaKnown RBP8.96□□□□□ -0.98
CCDC9-203ENST00000596938 DECR2Q9NUI1 292 aa8.96□□□□□ -0.98
CCDC9-203ENST00000596938 PLEK2Q9NYT0 353 aa8.96□□□□□ -0.98
CCDC9-203ENST00000596938 IL20Q9NYY1 176 aa8.96□□□□□ -0.98
CCDC9-203ENST00000596938 ASH2LQ9UBL3 628 aa8.96□□□□□ -0.98
CCDC9-203ENST00000596938 ZDHHC8Q9ULC8 765 aa8.96□□□□□ -0.98
CCDC9-203ENST00000596938 PRPF19Q9UMS4 504 aaKnown RBP8.96□□□□□ -0.98
CCDC9-203ENST00000596938 B9D1Q9UPM9 204 aa8.96□□□□□ -0.98
CCDC9-203ENST00000596938 LYVE1Q9Y5Y7 322 aa8.96□□□□□ -0.98
CCDC9-203ENST00000596938 MXRA5Q9NR99 2828 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 IGHV1-69-2A0A0G2JMI3 117 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 TNFRSF11BO00300 401 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 DCTN6O00399 190 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 RER1O15258 196 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 PPIHO43447 177 aaKnown RBP8.95□□□□□ -0.98
CCDC9-203ENST00000596938 DOK2O60496 412 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 ABHD16AO95870 558 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 RENP00797 406 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 GASTP01350 101 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 IGHV1-46P01743 117 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 TFP02787 698 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 GAAP10253 952 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 GSTM3P21266 225 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 ATP6V1B2P21281 511 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 NOS3P29474 1203 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 LMO4P61968 165 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 MS4A2Q01362 244 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 GLO1Q04760 184 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 PSG7Q13046 419 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 CDK5R2Q13319 367 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 ZMAT1Q5H9K5 638 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 ZNF770Q6IQ21 691 aaPredicted RBP8.95□□□□□ -0.98
CCDC9-203ENST00000596938 RPL13AP3Q6NVV1 102 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 LEG1Q6P5S2 330 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 ZNF620Q6ZNG0 422 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 RINLQ6ZS11 566 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 JAZF1Q86VZ6 243 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 OR4C15Q8NGM1 316 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 CLDND2Q8NHS1 167 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 GTF3AQ92664 365 aaKnown RBP8.95□□□□□ -0.98
CCDC9-203ENST00000596938 PTP4A1Q93096 173 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 DCLRE1CQ96SD1 692 aaKnown RBP8.95□□□□□ -0.98
CCDC9-203ENST00000596938 DDOQ99489 341 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 EGLN1Q9GZT9 426 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 FAM53CQ9NYF3 392 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 TAS2R1Q9NYW7 299 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 STARD10Q9Y365 291 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 GRIP1Q9Y3R0 1128 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 RTTNQ86VV8 2226 aa8.95□□□□□ -0.98
CCDC9-203ENST00000596938 OR6C68A6NDL8 312 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 ZSCAN5BA6NJL1 495 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 WNT9BO14905 357 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 TPD52L2O43399 206 aaKnown RBP8.94□□□□□ -0.98
CCDC9-203ENST00000596938 SPRY3O43610 288 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 CDC14BO60729 498 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 CD55P08174 381 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 HNF1AP20823 631 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 KITLGP21583 273 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 CENPAP49450 140 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 RGS6P49758 472 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 DVL1P1P54792 670 aaPredicted RBP8.94□□□□□ -0.98
CCDC9-203ENST00000596938 COX10Q12887 443 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 TSTQ16762 297 aaKnown RBP8.94□□□□□ -0.98
CCDC9-203ENST00000596938 RSPO1Q2MKA7 263 aaPredicted RBP8.94□□□□□ -0.98
CCDC9-203ENST00000596938 HFEQ30201 348 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 SLC36A3Q495N2 470 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 FAM98BQ52LJ0 330 aaKnown RBP8.94□□□□□ -0.98
CCDC9-203ENST00000596938 ZNF362Q5T0B9 420 aaPredicted RBP8.94□□□□□ -0.98
CCDC9-203ENST00000596938 RASSF6Q6ZTQ3 369 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 USP51Q70EK9 711 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 SLC26A10Q8NG04 563 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 OR52E2Q8NGJ4 325 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 OR5L1Q8NGL2 311 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 OR4K13Q8NH42 304 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 CMBLQ96DG6 245 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 ASB9Q96DX5 294 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 ELMOD3Q96FG2 381 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 COQ7Q99807 217 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 BTBD10Q9BSF8 475 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 HDHD2Q9H0R4 259 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 SAP30LQ9HAJ7 183 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 TMEFF2Q9UIK5 374 aaPredicted RBP8.94□□□□□ -0.98
CCDC9-203ENST00000596938 PURGQ9UJV8 347 aaKnown RBP8.94□□□□□ -0.98
CCDC9-203ENST00000596938 LHFPL6Q9Y693 200 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 CDH10Q9Y6N8 788 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 COL6A5A8TX70 2615 aa8.94□□□□□ -0.98
CCDC9-203ENST00000596938 BHLHE40O14503 412 aa8.93□□□□□ -0.98
CCDC9-203ENST00000596938 ACOT8O14734 319 aa8.93□□□□□ -0.98
CCDC9-203ENST00000596938 UBOX5O94941 541 aa8.93□□□□□ -0.98
CCDC9-203ENST00000596938 CCNB2O95067 398 aa8.93□□□□□ -0.98
CCDC9-203ENST00000596938 GPANK1O95872 356 aa8.93□□□□□ -0.98
CCDC9-203ENST00000596938 ANPEPP15144 967 aa8.93□□□□□ -0.98
CCDC9-203ENST00000596938 RAC2P15153 192 aa8.93□□□□□ -0.98
CCDC9-203ENST00000596938 HOXB6P17509 224 aaKnown RBP8.93□□□□□ -0.98
CCDC9-203ENST00000596938 SRD5A1P18405 259 aa8.93□□□□□ -0.98
CCDC9-203ENST00000596938 PCMT1P22061 227 aa8.93□□□□□ -0.98
CCDC9-203ENST00000596938 SLC3A1Q07837 685 aa8.93□□□□□ -0.98
CCDC9-203ENST00000596938 TRAP1Q12931 704 aaKnown RBP8.93□□□□□ -0.98
CCDC9-203ENST00000596938 ECH1Q13011 328 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms