RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 MRPL22Q9NWU5 206 aaKnown RBP9.55□□□□□ -0.88
LIG1-211ENST00000596457 LHFPL6Q9Y693 200 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 AKAP6Q13023 2319 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 CADP27708 2225 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 A0A1W2PPW3 197 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 TMEM129A0AVI4 362 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 SURF4O15260 269 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 CLPTM1O96005 669 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 IGHV4-39P01824 125 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 ADRA2AP08913 450 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 SPARCP09486 303 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 IGFBP5P24593 272 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 WNT5AP41221 380 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 SLC25A1P53007 311 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 NUDT6P53370 316 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 RPS7P62081 194 aaKnown RBP9.54□□□□□ -0.88
LIG1-211ENST00000596457 MAD2L1BPQ15013 274 aaPredicted RBP9.54□□□□□ -0.88
LIG1-211ENST00000596457 PTGES3Q15185 160 aaKnown RBP9.54□□□□□ -0.88
LIG1-211ENST00000596457 ZSCAN26Q16670 478 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 MSMPQ1L6U9 139 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 ELFN2Q5R3F8 820 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 KDM4DQ6B0I6 523 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 PRSS57Q6UWY2 283 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 CPOQ8IVL8 374 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 ZCCHC24Q8N2G6 241 aaKnown RBP9.54□□□□□ -0.88
LIG1-211ENST00000596457 OR1F12Q8NHA8 337 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 ABHD4Q8TB40 342 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 SYNPRQ8TBG9 265 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 STMN2Q93045 179 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 MRPL24Q96A35 216 aaKnown RBP9.54□□□□□ -0.88
LIG1-211ENST00000596457 C4orf45Q96LM5 186 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 CIB1Q99828 191 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 BCL2L14Q9BZR8 327 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 GABARAPL1Q9H0R8 117 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 WDR76Q9H967 626 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 ELOVL3Q9HB03 270 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 ZNF701Q9NV72 531 aaPredicted RBP9.54□□□□□ -0.88
LIG1-211ENST00000596457 MYEF2Q9P2K5 600 aaKnown RBP9.54□□□□□ -0.88
LIG1-211ENST00000596457 NDRG4Q9ULP0 352 aaKnown RBP9.54□□□□□ -0.88
LIG1-211ENST00000596457 NBEAL1Q6ZS30 2694 aa9.54□□□□□ -0.88
LIG1-211ENST00000596457 ERICH4A6NGS2 130 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 M0R129 80 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 ZNF593O00488 134 aaPredicted RBP9.53□□□□□ -0.88
LIG1-211ENST00000596457 SMAD7O15105 426 aaKnown RBP9.53□□□□□ -0.88
LIG1-211ENST00000596457 SYNGR3O43761 229 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 LY6HO94772 140 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 SNAP29O95721 258 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 ABHD16AO95870 558 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 NGFP01138 241 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 DBHP09172 617 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 COX5BP10606 129 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 GCH1P30793 250 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 ALDH3B1P43353 468 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 ENTPD1P49961 510 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 SELENOVP59797 346 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 ESRRGP62508 458 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 GABPB1Q06547 395 aaPredicted RBP9.53□□□□□ -0.88
LIG1-211ENST00000596457 EFNB3Q15768 340 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 CARTPTQ16568 116 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 CLEC12BQ2HXU8 276 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 SLC18B1Q6NT16 456 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 ARL9Q6T311 187 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 CFAP77Q6ZQR2 320 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 SPATC1Q76KD6 591 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 CXXC5Q7LFL8 322 aaKnown RBP9.53□□□□□ -0.88
LIG1-211ENST00000596457 ERI1Q8IV48 349 aaKnown RBP9.53□□□□□ -0.88
LIG1-211ENST00000596457 ZNF101Q8IZC7 436 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 BBS1Q8NFJ9 593 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 SLC25A40Q8TBP6 338 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 PTP4A1Q93096 173 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 ZMYND19Q96E35 227 aaPredicted RBP9.53□□□□□ -0.88
LIG1-211ENST00000596457 SORCS2Q96PQ0 1159 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 DOK1Q99704 481 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 NMNAT2Q9BZQ4 307 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 TPK1Q9H3S4 243 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 SLC25A19Q9HC21 320 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 HINT3Q9NQE9 182 aaKnown RBP9.53□□□□□ -0.88
LIG1-211ENST00000596457 CENPMQ9NSP4 180 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 TAAR3PQ9P1P4 343 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 ORC6Q9Y5N6 252 aa9.53□□□□□ -0.88
LIG1-211ENST00000596457 F5H5K5 113 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 GLCEO94923 617 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 PSKH1P11801 424 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 PAX1P15863 534 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 PCSK6P29122 969 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 EPHA2P29317 976 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 GSTT1P30711 240 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 GGT2P36268 569 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 POLR2IP36954 125 aaKnown RBP9.52□□□□□ -0.89
LIG1-211ENST00000596457 MPV17P39210 176 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 KLF3P57682 345 aaPredicted RBP9.52□□□□□ -0.89
LIG1-211ENST00000596457 PPP1CBP62140 327 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 APOFQ13790 326 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 EIF2B1Q14232 305 aaKnown RBP9.52□□□□□ -0.89
LIG1-211ENST00000596457 TAF13Q15543 124 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 NKPD1Q17RQ9 610 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 ZNF718Q3SXZ3 478 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 ZIK1Q3SY52 487 aaPredicted RBP9.52□□□□□ -0.89
LIG1-211ENST00000596457 UNQ6126/PRO20091Q6UXV3 157 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 RFPL4BQ6ZWI9 263 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms