RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 NMNAT2Q9BZQ4 307 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 RAB1BQ9H0U4 201 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 POFUT1Q9H488 388 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 PLEK2Q9NYT0 353 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 PDP1Q9P0J1 537 aaPredicted RBP9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 DNAJB9Q9UBS3 223 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 NDRG4Q9ULP0 352 aaKnown RBP9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 ATRQ13535 2644 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 A0A1W2PPW3 197 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 LYNX1G3V0Z9 82 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 TIPRLO75663 272 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 IGHV3-13P01766 116 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 HPXP02790 462 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 DBHP09172 617 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 LYNX1P0DP58 116 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 DAOP14920 347 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 SLC25A16P16260 332 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 PRKACGP22612 351 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 CENPAP49450 140 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 PDLIM4P50479 330 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 RASSF2P50749 326 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 PPP1CBP62140 327 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 TEKQ02763 1124 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 LOXL1Q08397 574 aaPredicted RBP9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 CCNIQ14094 377 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 CRMP1Q14194 572 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 RSPO1Q2MKA7 263 aaPredicted RBP9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 ELFN2Q5R3F8 820 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 SLC18B1Q6NT16 456 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 CFAP77Q6ZQR2 320 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 ASRGL1Q7L266 308 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 LINC00346Q8IVM7 164 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 OR2T33Q8NG76 320 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 OR9Q1Q8NGQ5 310 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 OR1F12Q8NHA8 337 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 ABHD4Q8TB40 342 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 KLF14Q8TD94 323 aaPredicted RBP9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 IPCEF1Q8WWN9 437 aaPredicted RBP9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 NEU4Q8WWR8 484 aaPredicted RBP9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 UTP4Q969X6 686 aaKnown RBP9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 HCAR1Q9BXC0 346 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 OR2J1Q9GZK6 312 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 MS4A5Q9H3V2 200 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 MYOZ1Q9NP98 299 aaPredicted RBP9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 PNRC2Q9NPJ4 139 aaKnown RBP9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 TAAR3PQ9P1P4 343 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 EIF3KQ9UBQ5 218 aaKnown RBP9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 CYB5R1Q9UHQ9 305 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 ATPIF1Q9UII2 106 aa9.39□□□□□ -0.91
SHKBP1-206ENST00000595523 WNK2Q9Y3S1 2297 aa9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 LOC390937A0A1W2PQ73 354 aa9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 NDUFS8O00217 210 aa9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 GNGT2O14610 69 aa9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 ABHD16AO95870 558 aa9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 GYPBP06028 91 aa9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 CLUP10909 449 aa9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 GIFP27352 417 aa9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 RPS27P42677 84 aaKnown RBP9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 NR4A2P43354 598 aa9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 MAGEB1P43366 347 aa9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 MMP15P51511 669 aa9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 RIN1Q13671 783 aa9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 CARTPTQ16568 116 aa9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 NKPD1Q17RQ9 610 aa9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 KRTAP27-1Q3LI81 207 aa9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 MBNL2Q5VZF2 373 aaKnown RBP9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 SHQ1Q6PI26 577 aaKnown RBP9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 ZNF786Q8N393 782 aa9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 OR51L1Q8NGJ5 315 aa9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 OR10S1Q8NGN2 331 aa9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 MAP6Q96JE9 813 aa9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 BPESC1Q9GZL8 116 aa9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 MMADHCQ9H3L0 296 aaPredicted RBP9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 YY1AP1Q9H869 796 aa9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 HINT3Q9NQE9 182 aaKnown RBP9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 CMC2Q9NRP2 79 aa9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 TBCCD1Q9NVR7 557 aa9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 KLHL21Q9UJP4 597 aa9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 BAIAP2Q9UQB8 552 aa9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 POLR1DQ9Y2S0 133 aa9.38□□□□□ -0.91
SHKBP1-206ENST00000595523 IGHV4-61A0A0C4DH41 118 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 TVP23AA6NH52 213 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 FAM183AA6NL82 134 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 C17orf100A8MU93 164 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 H3BN98 237 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 H3BSA7 217 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 E2F6O75461 281 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 ERCC1P07992 297 aaPredicted RBP9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 SPI1P17947 270 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 ANOS1P23352 680 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 COL8A2P25067 703 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 GRK5P34947 590 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 SLC25A1P53007 311 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 ATP6AP1Q15904 470 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 TMEM249Q2WGJ8 235 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 ZNF718Q3SXZ3 478 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 LINC01590Q5TEZ4 76 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 C1orf146Q5VVC0 180 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 ACSM5Q6NUN0 579 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 FAHD1Q6P587 224 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms