RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 INO80EQ8NBZ0 244 aaPredicted RBP11.88□□□□□ -0.51
VRK3-209ENST00000594948 FAM46BQ96A09 425 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 MMABQ96EY8 250 aaPredicted RBP11.88□□□□□ -0.51
VRK3-209ENST00000594948 ZNF75AQ96N20 296 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 G6PC2Q9NQR9 355 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 HPF1Q9NWY4 346 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 CGGBP1Q9UFW8 167 aaPredicted RBP11.88□□□□□ -0.51
VRK3-209ENST00000594948 TMEM218A2RU14 115 aa11.87□□□□□ -0.51
VRK3-209ENST00000594948 ALG1L2C9J202 215 aa11.87□□□□□ -0.51
VRK3-209ENST00000594948 TO15178 435 aa11.87□□□□□ -0.51
VRK3-209ENST00000594948 PLATP00750 562 aa11.87□□□□□ -0.51
VRK3-209ENST00000594948 FCER2P06734 321 aa11.87□□□□□ -0.51
VRK3-209ENST00000594948 CTLA4P16410 223 aa11.87□□□□□ -0.51
VRK3-209ENST00000594948 HSD11B1P28845 292 aa11.87□□□□□ -0.51
VRK3-209ENST00000594948 FNTBP49356 437 aa11.87□□□□□ -0.51
VRK3-209ENST00000594948 POLR2HP52434 150 aaKnown RBP11.87□□□□□ -0.51
VRK3-209ENST00000594948 CXADRP78310 365 aa11.87□□□□□ -0.51
VRK3-209ENST00000594948 GLO1Q04760 184 aa11.87□□□□□ -0.51
VRK3-209ENST00000594948 PPP1R1AQ13522 171 aa11.87□□□□□ -0.51
VRK3-209ENST00000594948 SCGB2B2Q4G0G5 96 aa11.87□□□□□ -0.51
VRK3-209ENST00000594948 DNM1P34Q6PK57 102 aa11.87□□□□□ -0.51
VRK3-209ENST00000594948 FJX1Q86VR8 437 aa11.87□□□□□ -0.51
VRK3-209ENST00000594948 SVBPQ8N300 66 aa11.87□□□□□ -0.51
VRK3-209ENST00000594948 PPP1R14AQ96A00 147 aa11.87□□□□□ -0.51
VRK3-209ENST00000594948 RPP25Q9BUL9 199 aaKnown RBP11.87□□□□□ -0.51
VRK3-209ENST00000594948 CHRNA10Q9GZZ6 450 aa11.87□□□□□ -0.51
VRK3-209ENST00000594948 CST11Q9H112 138 aa11.87□□□□□ -0.51
VRK3-209ENST00000594948 C8orf33Q9H7E9 229 aaPredicted RBP11.87□□□□□ -0.51
VRK3-209ENST00000594948 GPR27Q9NS67 375 aa11.87□□□□□ -0.51
VRK3-209ENST00000594948 TMEM100Q9NV29 134 aa11.87□□□□□ -0.51
VRK3-209ENST00000594948 OR52A1Q9UKL2 312 aa11.87□□□□□ -0.51
VRK3-209ENST00000594948 LOC107986453A0A1B0GWG9 222 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 FITM1A5D6W6 292 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 A6NIZ1 184 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 DBX1A6NMT0 343 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 A8MVM7 634 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 RAB27BO00194 218 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 TSPAN2O60636 221 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 ICOSLGO75144 302 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 MTRF1O75570 445 aaKnown RBP11.86□□□□□ -0.51
VRK3-209ENST00000594948 DUS4LO95620 317 aaKnown RBP11.86□□□□□ -0.51
VRK3-209ENST00000594948 BPNT1O95861 308 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 IGKV3-11P04433 115 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 RAP1BP61224 184 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 RAP1AP62834 184 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 CTAG1AP78358 180 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 MOGAT2Q3SYC2 334 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.86□□□□□ -0.51
VRK3-209ENST00000594948 C3orf33Q6P1S2 294 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 CORO6Q6QEF8 472 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 ZNF761Q86XN6 746 aaPredicted RBP11.86□□□□□ -0.51
VRK3-209ENST00000594948 JAGN1Q8N5M9 183 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 MRGPRFQ96AM1 343 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 ADOQ96SZ5 270 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 KLHDC3Q9BQ90 382 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 UQCC2Q9BRT2 126 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 NMES1Q9C002 83 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 UCK1Q9HA47 277 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 LANCL2Q9NS86 450 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 PCDHB10Q9UN67 800 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 FARSAQ9Y285 508 aaKnown RBP11.86□□□□□ -0.51
VRK3-209ENST00000594948 CARHSP1Q9Y2V2 147 aaKnown RBP11.86□□□□□ -0.51
VRK3-209ENST00000594948 TMED7-TICAM2A0A0A6YYA0 188 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 TEX13DA0A0J9YY54 714 aaPredicted RBP11.86□□□□□ -0.51
VRK3-209ENST00000594948 SPTY2D1-AS1A0A0U1RR47 76 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 DCDC2BA2VCK2 349 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 TMEM235A6NFC5 223 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 OR2W5A6NFC9 320 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 NPIPB13A6NJU9 1138 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 TMEM150CB9EJG8 249 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 NPIPB4C9JG80 1138 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 F5H0A9 414 aaPredicted RBP11.86□□□□□ -0.51
VRK3-209ENST00000594948 PLPP3O14495 311 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 HCRTR2O43614 444 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 RAD1O60671 282 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 STK17BO94768 372 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 CELA2BP08218 269 aaPredicted RBP11.86□□□□□ -0.51
VRK3-209ENST00000594948 CD79AP11912 226 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 TPT1P13693 172 aaKnown RBP11.86□□□□□ -0.51
VRK3-209ENST00000594948 CTSEP14091 401 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 CD1CP29017 333 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 CTHP32929 405 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 CX3CR1P49238 355 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 CCR5P51681 352 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 IL13RA1P78552 427 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 CYCSP99999 105 aaKnown RBP11.86□□□□□ -0.51
VRK3-209ENST00000594948 ZP4Q12836 540 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 CDNFQ49AH0 187 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 CHRDL2Q6WN34 429 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 TRAPPC6BQ86SZ2 158 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 TMEM151BQ8IW70 566 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 SLC30A7Q8NEW0 376 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 OR51A2Q8NGJ7 313 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 OR1S2Q8NGQ3 325 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 PIK3IP1Q96FE7 263 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 TSNAXQ99598 290 aaKnown RBP11.86□□□□□ -0.51
VRK3-209ENST00000594948 MKL2Q9ULH7 1088 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 TMED7Q9Y3B3 224 aa11.86□□□□□ -0.51
VRK3-209ENST00000594948 A0A0B4J2A0 478 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 OR2AT4A6NND4 320 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms