RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 SCG5P05408 212 aa15.15■□□□□ 0.02
SHKBP1-204ENST00000594862 ADH4P08319 380 aa15.15■□□□□ 0.02
SHKBP1-204ENST00000594862 GAAP10253 952 aa15.15■□□□□ 0.02
SHKBP1-204ENST00000594862 HIST1H1CP16403 213 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-204ENST00000594862 PCMT1P22061 227 aa15.15■□□□□ 0.02
SHKBP1-204ENST00000594862 ZNF81P51508 661 aa15.15■□□□□ 0.02
SHKBP1-204ENST00000594862 SPATA46Q5T0L3 261 aa15.15■□□□□ 0.02
SHKBP1-204ENST00000594862 ZNF770Q6IQ21 691 aaPredicted RBP15.15■□□□□ 0.02
SHKBP1-204ENST00000594862 ZBTB46Q86UZ6 589 aa15.15■□□□□ 0.02
SHKBP1-204ENST00000594862 SLC26A10Q8NG04 563 aa15.15■□□□□ 0.02
SHKBP1-204ENST00000594862 OR9Q2Q8NGE9 314 aa15.15■□□□□ 0.02
SHKBP1-204ENST00000594862 OR4K13Q8NH42 304 aa15.15■□□□□ 0.02
SHKBP1-204ENST00000594862 OR1F12Q8NHA8 337 aa15.15■□□□□ 0.02
SHKBP1-204ENST00000594862 COQ7Q99807 217 aa15.15■□□□□ 0.02
SHKBP1-204ENST00000594862 BTBD10Q9BSF8 475 aa15.15■□□□□ 0.02
SHKBP1-204ENST00000594862 THTPAQ9BU02 230 aa15.15■□□□□ 0.02
SHKBP1-204ENST00000594862 EGLN1Q9GZT9 426 aa15.15■□□□□ 0.02
SHKBP1-204ENST00000594862 RPRD1BQ9NQG5 326 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-204ENST00000594862 B9D1Q9UPM9 204 aa15.15■□□□□ 0.02
SHKBP1-204ENST00000594862 YLPM1P49750 1951 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-204ENST00000594862 LOC100289279A0A1B0GTE1 492 aa15.14■□□□□ 0.01
SHKBP1-204ENST00000594862 ARRDC5A6NEK1 342 aa15.14■□□□□ 0.01
SHKBP1-204ENST00000594862 TPD52L2O43399 206 aaKnown RBP15.14■□□□□ 0.01
SHKBP1-204ENST00000594862 LMX1BO60663 402 aa15.14■□□□□ 0.01
SHKBP1-204ENST00000594862 HNF1AP20823 631 aa15.14■□□□□ 0.01
SHKBP1-204ENST00000594862 MS4A2Q01362 244 aa15.14■□□□□ 0.01
SHKBP1-204ENST00000594862 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.14■□□□□ 0.01
SHKBP1-204ENST00000594862 COX10Q12887 443 aa15.14■□□□□ 0.01
SHKBP1-204ENST00000594862 ECH1Q13011 328 aa15.14■□□□□ 0.01
SHKBP1-204ENST00000594862 MICAQ29983 383 aa15.14■□□□□ 0.01
SHKBP1-204ENST00000594862 ALKBH6Q3KRA9 238 aa15.14■□□□□ 0.01
SHKBP1-204ENST00000594862 PRIMA1Q86XR5 153 aa15.14■□□□□ 0.01
SHKBP1-204ENST00000594862 OR6V1Q8N148 313 aa15.14■□□□□ 0.01
SHKBP1-204ENST00000594862 AQP11Q8NBQ7 271 aa15.14■□□□□ 0.01
SHKBP1-204ENST00000594862 OR52E2Q8NGJ4 325 aa15.14■□□□□ 0.01
SHKBP1-204ENST00000594862 OR5L1Q8NGL2 311 aa15.14■□□□□ 0.01
SHKBP1-204ENST00000594862 OR2T4Q8NH00 348 aa15.14■□□□□ 0.01
SHKBP1-204ENST00000594862 ELMOD3Q96FG2 381 aa15.14■□□□□ 0.01
SHKBP1-204ENST00000594862 DGCR6LQ9BY27 220 aa15.14■□□□□ 0.01
SHKBP1-204ENST00000594862 YY1AP1Q9H869 796 aa15.14■□□□□ 0.01
SHKBP1-204ENST00000594862 SAP30LQ9HAJ7 183 aa15.14■□□□□ 0.01
SHKBP1-204ENST00000594862 TBC1D23Q9NUY8 699 aa15.14■□□□□ 0.01
SHKBP1-204ENST00000594862 IGHV1-69-2A0A0G2JMI3 117 aa15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 BHLHE40O14503 412 aa15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 ACOT8O14734 319 aa15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 TIMM8AO60220 97 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 LILRA1O75019 489 aa15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 NCR1O76036 304 aa15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 NGFP01138 241 aa15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 TFP02787 698 aa15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 MPV17P39210 176 aa15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 CRYBB2P43320 205 aa15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 MAGEB1P43366 347 aa15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 MMP15P51511 669 aa15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 HIST1H3AP68431 136 aa15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 CCL8P80075 99 aa15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 CLEC12AQ5QGZ9 265 aa15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 HIST2H3PS2Q5TEC6 136 aa15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 HIST2H3AQ71DI3 136 aa15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 SDR9C7Q8NEX9 313 aa15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 OR2T33Q8NG76 320 aa15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 OR2AJ1Q8NGZ0 328 aa15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 MSI2Q96DH6 328 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 TSSK2Q96PF2 358 aa15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 CDADC1Q9BWV3 514 aa15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 SHARPINQ9H0F6 387 aa15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 EGLN3Q9H6Z9 239 aa15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 SRA1Q9HD15 236 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 ZNF275Q9NSD4 429 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 KLHL21Q9UJP4 597 aa15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 GRIP1Q9Y3R0 1128 aa15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 LHFPL6Q9Y693 200 aa15.13■□□□□ 0.01
SHKBP1-204ENST00000594862 ATRQ13535 2644 aa15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 DHRS12A0PJE2 317 aa15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 OR6C68A6NDL8 312 aa15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 LYNX1G3V0Z9 82 aa15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 DCTN6O00399 190 aa15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 RER1O15258 196 aa15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 PPIHO43447 177 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 RP2O75695 350 aa15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 UBOX5O94941 541 aa15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 MPZL1O95297 269 aa15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 CST1P01037 141 aa15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 GASTP01350 101 aa15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 IFNGP01579 166 aa15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 HLA-DQA2P01906 255 aa15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 FAM157CP0CG43 387 aa15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 LYNX1P0DP58 116 aa15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 TNFSF4P23510 183 aa15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 SLC3A1Q07837 685 aa15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 HFEQ30201 348 aa15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 CCDC92Q53HC0 331 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 LNX2Q8N448 690 aa15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 LINC01356Q8N9X3 169 aa15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 OR10G2Q8NGC3 310 aa15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 APOBEC3DQ96AK3 386 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 TIMD4Q96H15 378 aa15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 C1orf159Q96HA4 380 aa15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 MDFIQ99750 246 aa15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 CHID1Q9BWS9 393 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms