RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 PHC2Q8IXK0 858 aa17.2■□□□□ 0.34
LSM4-203ENST00000593829 OR6N1Q8NGY5 312 aa17.2■□□□□ 0.34
LSM4-203ENST00000593829 SLC25A44Q96H78 314 aaPredicted RBP17.2■□□□□ 0.34
LSM4-203ENST00000593829 MIXL1Q9H2W2 232 aa17.2■□□□□ 0.34
LSM4-203ENST00000593829 ISYNA1Q9NPH2 558 aa17.2■□□□□ 0.34
LSM4-203ENST00000593829 B3GAT2Q9NPZ5 323 aa17.2■□□□□ 0.34
LSM4-203ENST00000593829 SNTG1Q9NSN8 517 aa17.2■□□□□ 0.34
LSM4-203ENST00000593829 KLHL21Q9UJP4 597 aa17.2■□□□□ 0.34
LSM4-203ENST00000593829 MCIDASD6RGH6 385 aa17.19■□□□□ 0.34
LSM4-203ENST00000593829 HLA-DQB1P01920 261 aa17.19■□□□□ 0.34
LSM4-203ENST00000593829 ARPC4P59998 168 aa17.19■□□□□ 0.34
LSM4-203ENST00000593829 ZNF91Q05481 1191 aa17.19■□□□□ 0.34
LSM4-203ENST00000593829 ACKR1Q16570 336 aa17.19■□□□□ 0.34
LSM4-203ENST00000593829 SSX8Q7RTT4 187 aa17.19■□□□□ 0.34
LSM4-203ENST00000593829 ZER1Q7Z7L7 766 aa17.19■□□□□ 0.34
LSM4-203ENST00000593829 TMEM200AQ86VY9 491 aa17.19■□□□□ 0.34
LSM4-203ENST00000593829 WFDC8Q8IUA0 241 aa17.19■□□□□ 0.34
LSM4-203ENST00000593829 MUCL1Q96DR8 90 aa17.19■□□□□ 0.34
LSM4-203ENST00000593829 TRMT61AQ96FX7 289 aaKnown RBP17.19■□□□□ 0.34
LSM4-203ENST00000593829 CRLF2Q9HC73 371 aa17.19■□□□□ 0.34
LSM4-203ENST00000593829 GPR35Q9HC97 309 aa17.19■□□□□ 0.34
LSM4-203ENST00000593829 ACOXLQ9NUZ1 547 aa17.19■□□□□ 0.34
LSM4-203ENST00000593829 DIMT1Q9UNQ2 313 aaKnown RBP17.19■□□□□ 0.34
LSM4-203ENST00000593829 NPIPB13A6NJU9 1138 aa17.19■□□□□ 0.34
LSM4-203ENST00000593829 NOTOA8MTQ0 251 aa17.19■□□□□ 0.34
LSM4-203ENST00000593829 NPIPB4C9JG80 1138 aa17.19■□□□□ 0.34
LSM4-203ENST00000593829 CSF3P09919 207 aa17.19■□□□□ 0.34
LSM4-203ENST00000593829 CPEP16870 476 aa17.19■□□□□ 0.34
LSM4-203ENST00000593829 MYL9P24844 172 aa17.19■□□□□ 0.34
LSM4-203ENST00000593829 ERP29P30040 261 aaKnown RBP17.19■□□□□ 0.34
LSM4-203ENST00000593829 CSNK1A1P48729 337 aa17.19■□□□□ 0.34
LSM4-203ENST00000593829 ALKBH2Q6NS38 261 aa17.19■□□□□ 0.34
LSM4-203ENST00000593829 C17orf78Q8N4C9 275 aa17.19■□□□□ 0.34
LSM4-203ENST00000593829 LINC00471Q8N535 108 aa17.19■□□□□ 0.34
LSM4-203ENST00000593829 TXNIPQ9H3M7 391 aa17.19■□□□□ 0.34
LSM4-203ENST00000593829 RNF121Q9H920 327 aa17.19■□□□□ 0.34
LSM4-203ENST00000593829 CLEC2DQ9UHP7 191 aa17.19■□□□□ 0.34
LSM4-203ENST00000593829 UNC119BA6NIH7 251 aa17.18■□□□□ 0.34
LSM4-203ENST00000593829 KLF4O43474 513 aa17.18■□□□□ 0.34
LSM4-203ENST00000593829 PTBP1P26599 531 aaKnown RBP eCLIP17.18■□□□□ 0.34
LSM4-203ENST00000593829 CTXN1P60606 82 aa17.18■□□□□ 0.34
LSM4-203ENST00000593829 GALK2Q01415 458 aa17.18■□□□□ 0.34
LSM4-203ENST00000593829 PPA1Q15181 289 aa17.18■□□□□ 0.34
LSM4-203ENST00000593829 PHYHD1Q5SRE7 291 aa17.18■□□□□ 0.34
LSM4-203ENST00000593829 FAM131AQ6UXB0 335 aa17.18■□□□□ 0.34
LSM4-203ENST00000593829 LRRC75AQ8NAA5 344 aa17.18■□□□□ 0.34
LSM4-203ENST00000593829 ASB10Q8WXI3 467 aa17.18■□□□□ 0.34
LSM4-203ENST00000593829 C11orf54Q9H0W9 315 aaPredicted RBP17.18■□□□□ 0.34
LSM4-203ENST00000593829 NGBQ9NPG2 151 aa17.18■□□□□ 0.34
LSM4-203ENST00000593829 TXNL4BQ9NX01 149 aaKnown RBP17.18■□□□□ 0.34
LSM4-203ENST00000593829 SIGLEC7Q9Y286 467 aa17.18■□□□□ 0.34
LSM4-203ENST00000593829 DEFB108AA8MXU0 73 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 PTP4A3O75365 173 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 IGHG1P01857 330 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 GAAP10253 952 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 CEACAM16Q2WEN9 425 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 C1orf94Q6P1W5 598 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 CD300LDQ6UXZ3 194 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 OR1K1Q8NGR3 316 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 ANGPTL6Q8NI99 470 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 ZFAND1Q8TCF1 268 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 TMEM54Q969K7 222 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 BOD1Q96IK1 185 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 DMRTB1Q96MA1 342 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 IL4I1Q96RQ9 567 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 GPA33Q99795 319 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 ULBP2Q9BZM5 246 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 NIPAL2Q9H841 368 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 ABCB9Q9NP78 766 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 MRPS18AQ9NVS2 196 aaKnown RBP17.17■□□□□ 0.34
LSM4-203ENST00000593829 GLTPQ9NZD2 209 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 FABP12A6NFH5 140 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 MYL12BO14950 172 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 HRGP04196 525 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 PGA4P0DJD7 388 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 PGA3P0DJD8 388 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 FPR3P25089 353 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 HOXC12P31275 282 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 RPL4P36578 427 aaKnown RBP17.17■□□□□ 0.34
LSM4-203ENST00000593829 BEX5Q5H9J7 111 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 DDI2Q5TDH0 399 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 METAP1DQ6UB28 335 aaPredicted RBP17.17■□□□□ 0.34
LSM4-203ENST00000593829 OR52N5Q8NH56 324 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 AP3S1Q92572 193 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 TSSK6Q9BXA6 273 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 POLDIP3Q9BY77 421 aaKnown RBP17.17■□□□□ 0.34
LSM4-203ENST00000593829 MMP28Q9H239 520 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 CLEC4MQ9H2X3 399 aaPredicted RBP17.17■□□□□ 0.34
LSM4-203ENST00000593829 SLC17A5Q9NRA2 495 aa17.17■□□□□ 0.34
LSM4-203ENST00000593829 FBN2P35556 2912 aa17.16■□□□□ 0.34
LSM4-203ENST00000593829 IRGMA1A4Y4 181 aa17.16■□□□□ 0.34
LSM4-203ENST00000593829 SIAH2O43255 324 aa17.16■□□□□ 0.34
LSM4-203ENST00000593829 CDRT1O95170 752 aa17.16■□□□□ 0.34
LSM4-203ENST00000593829 NDUFB2O95178 105 aa17.16■□□□□ 0.34
LSM4-203ENST00000593829 IGHMP01871 453 aa17.16■□□□□ 0.34
LSM4-203ENST00000593829 POU1F1P28069 291 aa17.16■□□□□ 0.34
LSM4-203ENST00000593829 CLRN1P58418 232 aa17.16■□□□□ 0.34
LSM4-203ENST00000593829 RPL27P61353 136 aaKnown RBP17.16■□□□□ 0.34
LSM4-203ENST00000593829 ARF1P84077 181 aaKnown RBP17.16■□□□□ 0.34
LSM4-203ENST00000593829 PGBD2Q6P3X8 592 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms