RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 C1orf94Q6P1W5 598 aa19.07■□□□□ 0.64
SSBP4-203ENST00000593641 Q6ZR03 302 aa19.07■□□□□ 0.64
SSBP4-203ENST00000593641 VTCN1Q7Z7D3 282 aa19.07■□□□□ 0.64
SSBP4-203ENST00000593641 MUC20Q8N307 709 aaPredicted RBP19.07■□□□□ 0.64
SSBP4-203ENST00000593641 ZNF570Q96NI8 536 aa19.07■□□□□ 0.64
SSBP4-203ENST00000593641 DUX5Q96PT3 197 aa19.07■□□□□ 0.64
SSBP4-203ENST00000593641 OR2V2Q96R30 315 aa19.07■□□□□ 0.64
SSBP4-203ENST00000593641 SAR1AQ9NR31 198 aa19.07■□□□□ 0.64
SSBP4-203ENST00000593641 AP3M1Q9Y2T2 418 aa19.07■□□□□ 0.64
SSBP4-203ENST00000593641 ADAM18Q9Y3Q7 739 aa19.07■□□□□ 0.64
SSBP4-203ENST00000593641 SNX13Q9Y5W8 968 aa19.07■□□□□ 0.64
SSBP4-203ENST00000593641 PKD1L1Q8TDX9 2849 aa19.07■□□□□ 0.64
SSBP4-203ENST00000593641 MESTQ5EB52 335 aa19.06■□□□□ 0.64
SSBP4-203ENST00000593641 PRR31Q5SQ13 230 aa19.06■□□□□ 0.64
SSBP4-203ENST00000593641 RRM2BQ7LG56 351 aa19.06■□□□□ 0.64
SSBP4-203ENST00000593641 FAM156AQ8NDB6 213 aa19.06■□□□□ 0.64
SSBP4-203ENST00000593641 PTP4A1Q93096 173 aa19.06■□□□□ 0.64
SSBP4-203ENST00000593641 HAVCR1Q96D42 359 aa19.06■□□□□ 0.64
SSBP4-203ENST00000593641 Q96M85 177 aa19.06■□□□□ 0.64
SSBP4-203ENST00000593641 SIGLEC11Q96RL6 698 aa19.06■□□□□ 0.64
SSBP4-203ENST00000593641 STARD10Q9Y365 291 aa19.06■□□□□ 0.64
SSBP4-203ENST00000593641 A0A087WUU8 490 aa19.05■□□□□ 0.64
SSBP4-203ENST00000593641 TEX13CA0A0J9YWL9 993 aa19.05■□□□□ 0.64
SSBP4-203ENST00000593641 PRSS37A4D1T9 235 aa19.05■□□□□ 0.64
SSBP4-203ENST00000593641 F5H0A9 414 aaPredicted RBP19.05■□□□□ 0.64
SSBP4-203ENST00000593641 TMPRSS2O15393 492 aa19.05■□□□□ 0.64
SSBP4-203ENST00000593641 ZNF682O95780 498 aa19.05■□□□□ 0.64
SSBP4-203ENST00000593641 CTLA4P16410 223 aa19.05■□□□□ 0.64
SSBP4-203ENST00000593641 RBMXP38159 391 aaKnown RBP19.05■□□□□ 0.64
SSBP4-203ENST00000593641 BAMBIQ13145 260 aa19.05■□□□□ 0.64
SSBP4-203ENST00000593641 ZBED5Q49AG3 693 aa19.05■□□□□ 0.64
SSBP4-203ENST00000593641 IFI44LQ53G44 452 aa19.05■□□□□ 0.64
SSBP4-203ENST00000593641 KLF17Q5JT82 389 aaPredicted RBP19.05■□□□□ 0.64
SSBP4-203ENST00000593641 MBOAT2Q6ZWT7 520 aa19.05■□□□□ 0.64
SSBP4-203ENST00000593641 ARPINQ7Z6K5 226 aa19.05■□□□□ 0.64
SSBP4-203ENST00000593641 ATG16L2Q8NAA4 619 aa19.05■□□□□ 0.64
SSBP4-203ENST00000593641 MS4A7Q9GZW8 240 aaPredicted RBP19.05■□□□□ 0.64
SSBP4-203ENST00000593641 VIPAS39Q9H9C1 493 aa19.05■□□□□ 0.64
SSBP4-203ENST00000593641 LRCH1Q9Y2L9 728 aa19.05■□□□□ 0.64
SSBP4-203ENST00000593641 MEGF8Q7Z7M0 2845 aa19.05■□□□□ 0.64
SSBP4-203ENST00000593641 CEACAM18A8MTB9 384 aa19.04■□□□□ 0.64
SSBP4-203ENST00000593641 TMEM178BH3BS89 294 aa19.04■□□□□ 0.64
SSBP4-203ENST00000593641 J3QW42 95 aa19.04■□□□□ 0.64
SSBP4-203ENST00000593641 IFNL4K9M1U5 179 aa19.04■□□□□ 0.64
SSBP4-203ENST00000593641 CDC42EP2O14613 210 aa19.04■□□□□ 0.64
SSBP4-203ENST00000593641 FFAR1O14842 300 aa19.04■□□□□ 0.64
SSBP4-203ENST00000593641 RAC2P15153 192 aa19.04■□□□□ 0.64
SSBP4-203ENST00000593641 MMP16P51512 607 aa19.04■□□□□ 0.64
SSBP4-203ENST00000593641 SF3A3Q12874 501 aaKnown RBP eCLIP19.04■□□□□ 0.643e-6■■■□□ 15.3
SSBP4-203ENST00000593641 KRR1Q13601 381 aaKnown RBP19.04■□□□□ 0.64
SSBP4-203ENST00000593641 TUSC1Q2TAM9 212 aa19.04■□□□□ 0.64
SSBP4-203ENST00000593641 SLC27A4Q6P1M0 643 aa19.04■□□□□ 0.64
SSBP4-203ENST00000593641 TMPRSS11FQ6ZWK6 438 aa19.04■□□□□ 0.64
SSBP4-203ENST00000593641 FKBP9P1Q75LS8 142 aa19.04■□□□□ 0.64
SSBP4-203ENST00000593641 OR5AS1Q8N127 324 aa19.04■□□□□ 0.64
SSBP4-203ENST00000593641 SLC7A6Q92536 515 aa19.04■□□□□ 0.64
SSBP4-203ENST00000593641 SLC25A28Q96A46 364 aa19.04■□□□□ 0.64
SSBP4-203ENST00000593641 RERGLQ9H628 205 aa19.04■□□□□ 0.64
SSBP4-203ENST00000593641 ASH2LQ9UBL3 628 aa19.04■□□□□ 0.64
SSBP4-203ENST00000593641 TMEM5Q9Y2B1 443 aa19.04■□□□□ 0.64
SSBP4-203ENST00000593641 CAPN7Q9Y6W3 813 aa19.04■□□□□ 0.64
SSBP4-203ENST00000593641 RGS6P49758 472 aa19.03■□□□□ 0.64
SSBP4-203ENST00000593641 ERFP50548 548 aa19.03■□□□□ 0.64
SSBP4-203ENST00000593641 LSM6P62312 80 aaKnown RBP19.03■□□□□ 0.64
SSBP4-203ENST00000593641 TBPL2Q6SJ96 375 aa19.03■□□□□ 0.64
SSBP4-203ENST00000593641 BTNL3Q6UXE8 466 aa19.03■□□□□ 0.64
SSBP4-203ENST00000593641 FAM122BQ7Z309 247 aa19.03■□□□□ 0.64
SSBP4-203ENST00000593641 CYP4Z1Q86W10 505 aa19.03■□□□□ 0.64
SSBP4-203ENST00000593641 GLB1L2Q8IW92 636 aa19.03■□□□□ 0.64
SSBP4-203ENST00000593641 BCL6BQ8N143 479 aaPredicted RBP19.03■□□□□ 0.64
SSBP4-203ENST00000593641 OR5L1Q8NGL2 311 aa19.03■□□□□ 0.64
SSBP4-203ENST00000593641 OR1F12Q8NHA8 337 aa19.03■□□□□ 0.64
SSBP4-203ENST00000593641 RCN3Q96D15 328 aa19.03■□□□□ 0.64
SSBP4-203ENST00000593641 C1QTNF5Q9BXJ0 243 aa19.03■□□□□ 0.64
SSBP4-203ENST00000593641 SYT4Q9H2B2 425 aa19.03■□□□□ 0.64
SSBP4-203ENST00000593641 ZNF696Q9H7X3 374 aa19.03■□□□□ 0.64
SSBP4-203ENST00000593641 GCM1Q9NP62 436 aa19.03■□□□□ 0.64
SSBP4-203ENST00000593641 FGFR1OP2Q9NVK5 253 aa19.03■□□□□ 0.64
SSBP4-203ENST00000593641 IL20RAQ9UHF4 553 aa19.03■□□□□ 0.64
SSBP4-203ENST00000593641 POLR1DQ9Y2S0 133 aa19.03■□□□□ 0.64
SSBP4-203ENST00000593641 OR6C6A6NF89 314 aa19.02■□□□□ 0.64
SSBP4-203ENST00000593641 CXCR6O00574 342 aa19.02■□□□□ 0.64
SSBP4-203ENST00000593641 GSTA4O15217 222 aa19.02■□□□□ 0.64
SSBP4-203ENST00000593641 SLC16A7O60669 478 aa19.02■□□□□ 0.64
SSBP4-203ENST00000593641 KHDRBS3O75525 346 aaKnown RBP19.02■□□□□ 0.64
SSBP4-203ENST00000593641 RPS2P15880 293 aaKnown RBP19.02■□□□□ 0.64
SSBP4-203ENST00000593641 CPT2P23786 658 aa19.02■□□□□ 0.64
SSBP4-203ENST00000593641 SDHAP31040 664 aa19.02■□□□□ 0.64
SSBP4-203ENST00000593641 OR10AD1Q8NGE0 317 aa19.02■□□□□ 0.64
SSBP4-203ENST00000593641 OR52E2Q8NGJ4 325 aa19.02■□□□□ 0.64
SSBP4-203ENST00000593641 RASD2Q96D21 266 aa19.02■□□□□ 0.64
SSBP4-203ENST00000593641 ZNF48Q96MX3 618 aaPredicted RBP19.02■□□□□ 0.64
SSBP4-203ENST00000593641 SSBP3Q9BWW4 388 aaPredicted RBP19.02■□□□□ 0.64
SSBP4-203ENST00000593641 ANKRD19PQ9H560 264 aa19.02■□□□□ 0.64
SSBP4-203ENST00000593641 NMNAT1Q9HAN9 279 aaPredicted RBP19.02■□□□□ 0.64
SSBP4-203ENST00000593641 ARGLU1Q9NWB6 273 aaPredicted RBP19.02■□□□□ 0.64
SSBP4-203ENST00000593641 CMTM6Q9NX76 183 aa19.02■□□□□ 0.64
SSBP4-203ENST00000593641 ATPIF1Q9UII2 106 aa19.02■□□□□ 0.64
SSBP4-203ENST00000593641 NDUFB2O95178 105 aa19.01■□□□□ 0.63
SSBP4-203ENST00000593641 RNASE1P07998 156 aaKnown RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms