RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 OR5AS1Q8N127 324 aa13.72□□□□□ -0.21
LIG1-205ENST00000593425 HAVCR1Q96D42 359 aa13.72□□□□□ -0.21
LIG1-205ENST00000593425 Q96M85 177 aa13.72□□□□□ -0.21
LIG1-205ENST00000593425 SIKE1Q9BRV8 207 aa13.72□□□□□ -0.21
LIG1-205ENST00000593425 WACQ9BTA9 647 aa13.72□□□□□ -0.21
LIG1-205ENST00000593425 MS4A7Q9GZW8 240 aaPredicted RBP13.72□□□□□ -0.21
LIG1-205ENST00000593425 GCM1Q9NP62 436 aa13.72□□□□□ -0.21
LIG1-205ENST00000593425 GMPR2Q9P2T1 348 aaKnown RBP13.72□□□□□ -0.21
LIG1-205ENST00000593425 MGAM2Q2M2H8 2515 aa13.72□□□□□ -0.21
LIG1-205ENST00000593425 CDC42EP2O14613 210 aa13.71□□□□□ -0.21
LIG1-205ENST00000593425 FFAR1O14842 300 aa13.71□□□□□ -0.21
LIG1-205ENST00000593425 ZNF205O95201 554 aa13.71□□□□□ -0.21
LIG1-205ENST00000593425 WNT2P09544 360 aa13.71□□□□□ -0.21
LIG1-205ENST00000593425 CTLA4P16410 223 aa13.71□□□□□ -0.21
LIG1-205ENST00000593425 TUBG1P23258 451 aa13.71□□□□□ -0.21
LIG1-205ENST00000593425 GPR4P46093 362 aa13.71□□□□□ -0.21
LIG1-205ENST00000593425 SLC9A3P48764 834 aa13.71□□□□□ -0.21
LIG1-205ENST00000593425 TRAM2Q15035 370 aa13.71□□□□□ -0.21
LIG1-205ENST00000593425 TBPL2Q6SJ96 375 aa13.71□□□□□ -0.21
LIG1-205ENST00000593425 FAM122BQ7Z309 247 aa13.71□□□□□ -0.21
LIG1-205ENST00000593425 PARP8Q8N3A8 854 aa13.71□□□□□ -0.21
LIG1-205ENST00000593425 OR2T12Q8NG77 320 aa13.71□□□□□ -0.21
LIG1-205ENST00000593425 OR10AD1Q8NGE0 317 aa13.71□□□□□ -0.21
LIG1-205ENST00000593425 ZNF420Q8TAQ5 688 aaPredicted RBP13.71□□□□□ -0.21
LIG1-205ENST00000593425 FNDC11Q9BVV2 318 aa13.71□□□□□ -0.21
LIG1-205ENST00000593425 TUBG2Q9NRH3 451 aa13.71□□□□□ -0.21
LIG1-205ENST00000593425 GRHPRQ9UBQ7 328 aa13.71□□□□□ -0.21
LIG1-205ENST00000593425 LRCH1Q9Y2L9 728 aa13.71□□□□□ -0.21
LIG1-205ENST00000593425 TRRAPQ9Y4A5 3859 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 A0A087WUU8 490 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 TEX13CA0A0J9YWL9 993 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 MDFIC2A0A1B0GVS7 189 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 BBIP1A8MTZ0 92 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 HMGB1P1B2RPK0 211 aaPredicted RBP13.7□□□□□ -0.22
LIG1-205ENST00000593425 CLDN34H7C241 214 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 IMPA2O14732 288 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 SURF4O15260 269 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 CYB5R3P00387 301 aaPredicted RBP13.7□□□□□ -0.22
LIG1-205ENST00000593425 NPPAP01160 153 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 CD14P08571 375 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 DBHP09172 617 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 IFNA8P32881 189 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 RPL4P36578 427 aaKnown RBP13.7□□□□□ -0.22
LIG1-205ENST00000593425 IL13RA1P78552 427 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 GUCY1A3Q02108 690 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 KLF10Q13118 480 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 AQP6Q13520 282 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 HLXQ14774 488 aaPredicted RBP13.7□□□□□ -0.22
LIG1-205ENST00000593425 ANKDD1AQ495B1 522 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 CCDC92Q53HC0 331 aaPredicted RBP13.7□□□□□ -0.22
LIG1-205ENST00000593425 LEG1Q6P5S2 330 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 TREML4Q6UXN2 200 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 MUC20Q8N307 709 aaPredicted RBP13.7□□□□□ -0.22
LIG1-205ENST00000593425 ATG16L2Q8NAA4 619 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 OR52E2Q8NGJ4 325 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 ACOT11Q8WXI4 607 aaPredicted RBP13.7□□□□□ -0.22
LIG1-205ENST00000593425 PTP4A1Q93096 173 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 SLC25A28Q96A46 364 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 DACT3Q96B18 629 aaPredicted RBP13.7□□□□□ -0.22
LIG1-205ENST00000593425 RASD2Q96D21 266 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 ZNF570Q96NI8 536 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 SSBP3Q9BWW4 388 aaPredicted RBP13.7□□□□□ -0.22
LIG1-205ENST00000593425 PTTG3PQ9NZH4 202 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 ASH2LQ9UBL3 628 aa13.7□□□□□ -0.22
LIG1-205ENST00000593425 TRAV40A0A0B4J280 105 aa13.69□□□□□ -0.22
LIG1-205ENST00000593425 ELOVL7A1L3X0 281 aa13.69□□□□□ -0.22
LIG1-205ENST00000593425 PRSS37A4D1T9 235 aa13.69□□□□□ -0.22
LIG1-205ENST00000593425 OR6C6A6NF89 314 aa13.69□□□□□ -0.22
LIG1-205ENST00000593425 H0YL77 283 aa13.69□□□□□ -0.22
LIG1-205ENST00000593425 GPANK1O95872 356 aa13.69□□□□□ -0.22
LIG1-205ENST00000593425 PLATP00750 562 aa13.69□□□□□ -0.22
LIG1-205ENST00000593425 IFNW1P05000 195 aa13.69□□□□□ -0.22
LIG1-205ENST00000593425 RAC2P15153 192 aa13.69□□□□□ -0.22
LIG1-205ENST00000593425 RPS2P15880 293 aaKnown RBP13.69□□□□□ -0.22
LIG1-205ENST00000593425 SF3A3Q12874 501 aaKnown RBP eCLIP13.69□□□□□ -0.22
LIG1-205ENST00000593425 OR2T2Q6IF00 324 aa13.69□□□□□ -0.22
LIG1-205ENST00000593425 ZNF730Q6ZMV8 503 aa13.69□□□□□ -0.22
LIG1-205ENST00000593425 C9orf139Q6ZV77 190 aa13.69□□□□□ -0.22
LIG1-205ENST00000593425 MBOAT2Q6ZWT7 520 aa13.69□□□□□ -0.22
LIG1-205ENST00000593425 FAM156AQ8NDB6 213 aa13.69□□□□□ -0.22
LIG1-205ENST00000593425 OR1F12Q8NHA8 337 aa13.69□□□□□ -0.22
LIG1-205ENST00000593425 UPRTQ96BW1 309 aa13.69□□□□□ -0.22
LIG1-205ENST00000593425 MEGF10Q96KG7 1140 aa13.69□□□□□ -0.22
LIG1-205ENST00000593425 TMEM165Q9HC07 324 aa13.69□□□□□ -0.22
LIG1-205ENST00000593425 COA3Q9Y2R0 106 aaPredicted RBP13.69□□□□□ -0.22
LIG1-205ENST00000593425 IGHV2-70DA0A0C4DH43 119 aa13.68□□□□□ -0.22
LIG1-205ENST00000593425 IGHV3-64DA0A0J9YX35 117 aa13.68□□□□□ -0.22
LIG1-205ENST00000593425 LOC100653049A0A140TA62 436 aa13.68□□□□□ -0.22
LIG1-205ENST00000593425 XKRYO14609 159 aa13.68□□□□□ -0.22
LIG1-205ENST00000593425 MLNRO43193 412 aa13.68□□□□□ -0.22
LIG1-205ENST00000593425 KRT34O76011 436 aa13.68□□□□□ -0.22
LIG1-205ENST00000593425 PPIAL4GP0DN37 164 aa13.68□□□□□ -0.22
LIG1-205ENST00000593425 MDKP21741 143 aaPredicted RBP13.68□□□□□ -0.22
LIG1-205ENST00000593425 KRR1Q13601 381 aaKnown RBP13.68□□□□□ -0.22
LIG1-205ENST00000593425 ZBED5Q49AG3 693 aa13.68□□□□□ -0.22
LIG1-205ENST00000593425 FAM201AQ5SY85 155 aa13.68□□□□□ -0.22
LIG1-205ENST00000593425 TMPRSS11FQ6ZWK6 438 aa13.68□□□□□ -0.22
LIG1-205ENST00000593425 KLBQ86Z14 1044 aa13.68□□□□□ -0.22
LIG1-205ENST00000593425 RNF113BQ8IZP6 322 aaKnown RBP13.68□□□□□ -0.22
LIG1-205ENST00000593425 POU5F2Q8N7G0 328 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms