RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 UBE2TQ9NPD8 197 aaPredicted RBP3.93□□□□□ -1.78
SMAD4-216ENST00000593223 GPATCH2LQ9NWQ4 482 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 C1orf123Q9NWV4 160 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 TAS2R9Q9NYW1 312 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 UVRAGQ9P2Y5 699 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 PILRAQ9UKJ1 303 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 NUP50Q9UKX7 468 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 TIMM10BQ9Y5J6 103 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 SAR1BQ9Y6B6 198 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 FREM2Q5SZK8 3169 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 ATP6AP2A0A1C7CYW4 349 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 FUOMA2VDF0 154 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 YJEFN3A6XGL0 299 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 A8MX80 341 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 LMO7DNF2Z398 122 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 F8VP50 259 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 CLDN34H7C241 214 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 DYNC1I1O14576 645 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 CHST1O43916 411 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 AIREO43918 545 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 ENTPD5O75356 428 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 STK17BO94768 372 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 SLC35G4P0C7Q5 338 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 PET100P0DJ07 73 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 GIMD1P0DJR0 217 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 CYP11B1P15538 503 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 CD1DP15813 335 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 CBR1P16152 277 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 SELEP16581 610 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 DTYMKP23919 212 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 CCNE1P24864 410 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 HLA-DMAP28067 261 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 GABRR2P28476 465 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 RPL13AP40429 203 aaKnown RBP3.92□□□□□ -1.78
SMAD4-216ENST00000593223 CSKP41240 450 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 SERPINB8P50452 374 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 MLF1P58340 268 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 CEACAM7Q14002 265 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 MEF2DQ14814 521 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 COX19Q49B96 90 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 SLC22A10Q63ZE4 541 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 SPOPLQ6IQ16 392 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 C3orf33Q6P1S2 294 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 PRMT9Q6P2P2 845 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 CD300LGQ6UXG3 332 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 TMEM184AQ6ZMB5 413 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 DPY19L2P2Q6ZN68 376 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 SMIM15Q7Z3B0 74 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 ANKRD37Q7Z713 158 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 KCNMB4Q86W47 210 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 OR5B17Q8NGF7 314 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 OR1L6Q8NGR2 347 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 OR2L8Q8NGY9 312 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 GPR151Q8TDV0 419 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 DNAJB3Q8WWF6 145 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 CDS1Q92903 461 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 TOMM40LQ969M1 308 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 S100PBPQ96BU1 408 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 RNF170Q96K19 258 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 C12orf42Q96LP6 360 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 XPO6Q96QU8 1125 aaKnown RBP3.92□□□□□ -1.78
SMAD4-216ENST00000593223 MBOAT4Q96T53 435 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 PSMB7Q99436 277 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 AGPAT1Q99943 283 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 ZNF426Q9BUY5 554 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 SYT4Q9H2B2 425 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 KIR3DX1Q9H7L2 352 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 JPT2Q9H910 190 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 UGT1A10Q9HAW8 530 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 ANKHQ9HCJ1 492 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 IL1RAPQ9NPH3 570 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 C12orf4Q9NQ89 552 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.92□□□□□ -1.78
SMAD4-216ENST00000593223 DIMT1Q9UNQ2 313 aaKnown RBP3.92□□□□□ -1.78
SMAD4-216ENST00000593223 MEMO1Q9Y316 297 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 ZNF175Q9Y473 711 aa3.92□□□□□ -1.78
SMAD4-216ENST00000593223 TBL2Q9Y4P3 447 aaKnown RBP3.92□□□□□ -1.78
SMAD4-216ENST00000593223 TSSC4Q9Y5U2 329 aaPredicted RBP3.92□□□□□ -1.78
SMAD4-216ENST00000593223 TRBV9A0A0B4J1U6 114 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 A0A1W2PPR1 153 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 SHISA9B4DS77 424 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 J3QKU1 62 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 M0R036 132 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 SIRPB1O00241 398 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 GOSR2O14653 212 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 SLC16A4O15374 487 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 AQP9O43315 295 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 PRKAB2O43741 272 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 SH3BGRLO75368 114 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 FCN3O75636 299 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 LDOC1O95751 146 aaPredicted RBP3.91□□□□□ -1.78
SMAD4-216ENST00000593223 TMEM50AO95807 157 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 HLA-HP01893 362 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 GP1BAP07359 652 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 H2BFMP0C1H6 154 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 HSPD1P10809 573 aaKnown RBP3.91□□□□□ -1.78
SMAD4-216ENST00000593223 ZNF43P17038 809 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 KITLGP21583 273 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 G0S2P27469 103 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 HTR2CP28335 458 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms