RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 MYOZ1Q9NP98 299 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-227ENST00000591849 DLL4Q9NR61 685 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 AP4S1Q9Y587 144 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 PLCE1Q9P212 2302 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 RAI1Q7Z5J4 1906 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-227ENST00000591849 IGHV4-30-2A0A087WSY4 118 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 PLSCR5A0PG75 271 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 OR6C6A6NF89 314 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 TVP23AA6NH52 213 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 RER1O15258 196 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 LY6G6DO95868 133 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 CLPTM1O96005 669 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 HMGN1P05114 100 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 FCGR1AP12314 374 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 OSMP13725 252 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 DAOP14920 347 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 SLC25A16P16260 332 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 GRK5P34947 590 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 WNT5AP41221 380 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 ERVS71-1P61550 626 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 CRMP1Q14194 572 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 TAF13Q15543 124 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 ELFN2Q5R3F8 820 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 SLC27A4Q6P1M0 643 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 SHQ1Q6PI26 577 aaKnown RBP8.65□□□□□ -1.02
BRCA1-227ENST00000591849 CORO6Q6QEF8 472 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 ZBTB46Q86UZ6 589 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 HIPK1Q86Z02 1210 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 LINC00346Q8IVM7 164 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 C10orf67Q8IYJ2 551 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 HS3ST5Q8IZT8 346 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 IQCF1Q8N6M8 205 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 MAPK1IP1LQ8NDC0 245 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 ZNF540Q8NDQ6 660 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 OR51L1Q8NGJ5 315 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 OR5L1Q8NGL2 311 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 OR6K6Q8NGW6 343 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 OR4Q3Q8NH05 313 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 OR5K1Q8NHB7 308 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 SLC25A40Q8TBP6 338 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 UBASH3BQ8TF42 649 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 DNAJC9Q8WXX5 260 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 SLCO4A1Q96BD0 722 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 COG8Q96MW5 612 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 HDHD2Q9H0R4 259 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 HINT3Q9NQE9 182 aaKnown RBP8.65□□□□□ -1.02
BRCA1-227ENST00000591849 DECR2Q9NUI1 292 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 MYEF2Q9P2K5 600 aaKnown RBP8.65□□□□□ -1.02
BRCA1-227ENST00000591849 KCNG2Q9UJ96 466 aa8.65□□□□□ -1.02
BRCA1-227ENST00000591849 TLN2Q9Y4G6 2542 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 LOC390937A0A1W2PQ73 354 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 G3V2T6 193 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 NDUFS8O00217 210 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 TIMM8AO60220 97 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-227ENST00000591849 NGFP01138 241 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 TFP02787 698 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 GAAP10253 952 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 NAT2P11245 290 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 ZNF250P15622 560 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 ZNF23P17027 643 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 TUBG1P23258 451 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 RGS6P49758 472 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 BLVRAP53004 296 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 PPP2R2BQ00005 443 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 DBPQ10586 325 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-227ENST00000591849 ECH1Q13011 328 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 GGTLC2Q14390 218 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 ATP6AP1Q15904 470 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 MSMPQ1L6U9 139 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 CCDC92Q53HC0 331 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-227ENST00000591849 AMIGO2Q86SJ2 522 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 ZDHHC13Q8IUH4 622 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 ZNF101Q8IZC7 436 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 SLC26A10Q8NG04 563 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 C10orf105Q8TEF2 133 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 SLC7A6Q92536 515 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 NRBF2Q96F24 287 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 DCLRE1CQ96SD1 692 aaKnown RBP8.64□□□□□ -1.03
BRCA1-227ENST00000591849 COQ7Q99807 217 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 OR2J1Q9GZK6 312 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 OR51V1Q9H2C8 321 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 TUBG2Q9NRH3 451 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 PAPOLBQ9NRJ5 636 aaKnown RBP8.64□□□□□ -1.03
BRCA1-227ENST00000591849 TBCCD1Q9NVR7 557 aa8.64□□□□□ -1.03
BRCA1-227ENST00000591849 PRR23D1E9PI22 279 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-227ENST00000591849 F5H5K5 113 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 ZNF593O00488 134 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-227ENST00000591849 SPRY3O43610 288 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 IGHV3-13P01766 116 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 GYPBP06028 91 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 HEXAP06865 529 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 SPARCP09486 303 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 PRR23D2P0DMB1 279 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-227ENST00000591849 SPI1P17947 270 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 USF1P22415 310 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-227ENST00000591849 GSTT1P30711 240 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 LIPAP38571 399 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 MPV17P39210 176 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 ENTPD1P49961 510 aa8.63□□□□□ -1.03
BRCA1-227ENST00000591849 ZNF81P51508 661 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms