RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 ZNF226Q9NYT6 803 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 IL20Q9NYY1 176 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 VSX1Q9NZR4 365 aaPredicted RBP5.59□□□□□ -1.51
VPS4B-205ENST00000591383 KLHL21Q9UJP4 597 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 AMDHD2Q9Y303 409 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 RRP15Q9Y3B9 282 aaKnown RBP5.59□□□□□ -1.51
VPS4B-205ENST00000591383 UGT2A1Q9Y4X1 527 aa5.59□□□□□ -1.51
VPS4B-205ENST00000591383 PRR14LQ5THK1 2151 aa5.59□□□□□ -1.52
VPS4B-205ENST00000591383 LRBAP50851 2863 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 POLQO75417 2590 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 OR6C68A6NDL8 312 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 RPL36A-HNRNPH2H7BZ11 118 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 ARPC3O15145 178 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 IDH3BO43837 385 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 KHDRBS3O75525 346 aaKnown RBP5.58□□□□□ -1.52
VPS4B-205ENST00000591383 RAB36O95755 333 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 CD1AP06126 327 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 MSR1P21757 451 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 EPHA2P29317 976 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 CRABP1P29762 137 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 CDKN2AP42771 156 aaKnown RBP5.58□□□□□ -1.52
VPS4B-205ENST00000591383 PTDSS1P48651 473 aaKnown RBP5.58□□□□□ -1.52
VPS4B-205ENST00000591383 IDH3GP51553 393 aaPredicted RBP5.58□□□□□ -1.52
VPS4B-205ENST00000591383 CRISP1P54107 249 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 RPS7P62081 194 aaKnown RBP5.58□□□□□ -1.52
VPS4B-205ENST00000591383 ESRRGP62508 458 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 HSF2Q03933 536 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 SPOCK1Q08629 439 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 ETFDHQ16134 617 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 SNAPC1Q16533 368 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 MEP1BQ16820 701 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 KLHL12Q53G59 568 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 TIMM23BQ5SRD1 257 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 THEM4Q5T1C6 240 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 C10orf128Q5T292 105 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 ACSM5Q6NUN0 579 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 ADAM5Q6NVV9 412 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 PLBD1Q6P4A8 553 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 SLC16A14Q7RTX9 510 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 MDP1Q86V88 176 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 LRRC18Q8N456 261 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 SLC22A24Q8N4F4 322 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 LINC00482Q8N8I6 264 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 OR51L1Q8NGJ5 315 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 OR2T4Q8NH00 348 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 FNDC8Q8TC99 324 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 CYGBQ8WWM9 190 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 BCL2L2Q92843 193 aaPredicted RBP5.58□□□□□ -1.52
VPS4B-205ENST00000591383 MUL1Q969V5 352 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 WFIKKN1Q96NZ8 548 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 MBOAT4Q96T53 435 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 KCNS3Q9BQ31 491 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 OSBPL10Q9BXB5 764 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 HDHD5Q9BXW7 423 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 MRPL13Q9BYD1 178 aaKnown RBP5.58□□□□□ -1.52
VPS4B-205ENST00000591383 NUAK2Q9H093 628 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 NELFAQ9H3P2 528 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 TOR3AQ9H497 397 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 DCLRE1BQ9H816 532 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 CNTD2Q9H8S5 307 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 RNF121Q9H920 327 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 NOX3Q9HBY0 568 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 CCNB1IP1Q9NPC3 277 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 NGBQ9NPG2 151 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 TVP23BQ9NYZ1 205 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 USE1Q9NZ43 259 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 NPAP1Q9NZP6 1156 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 NKX1-2Q9UD57 310 aaPredicted RBP5.58□□□□□ -1.52
VPS4B-205ENST00000591383 FBN2P35556 2912 aa5.58□□□□□ -1.52
VPS4B-205ENST00000591383 ARPC4-TTLL3A0A0A6YYG9 625 aa5.57□□□□□ -1.52
VPS4B-205ENST00000591383 IGLV1-36A0A0B4J1U3 117 aa5.57□□□□□ -1.52
VPS4B-205ENST00000591383 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.57□□□□□ -1.52
VPS4B-205ENST00000591383 ZNF503-AS2A6NEH8 195 aa5.57□□□□□ -1.52
VPS4B-205ENST00000591383 TVP23AA6NH52 213 aa5.57□□□□□ -1.52
VPS4B-205ENST00000591383 PRSS29PA6NIE9 313 aa5.57□□□□□ -1.52
VPS4B-205ENST00000591383 A6NNC1 897 aa5.57□□□□□ -1.52
VPS4B-205ENST00000591383 ZAR1LA6NP61 321 aa5.57□□□□□ -1.52
VPS4B-205ENST00000591383 PRR23D1E9PI22 279 aaPredicted RBP5.57□□□□□ -1.52
VPS4B-205ENST00000591383 DCTN6O00399 190 aa5.57□□□□□ -1.52
VPS4B-205ENST00000591383 SURF4O15260 269 aa5.57□□□□□ -1.52
VPS4B-205ENST00000591383 UBL3O95164 117 aa5.57□□□□□ -1.52
VPS4B-205ENST00000591383 ATP6V1G2O95670 118 aa5.57□□□□□ -1.52
VPS4B-205ENST00000591383 SNAP29O95721 258 aa5.57□□□□□ -1.52
VPS4B-205ENST00000591383 ABHD16AO95870 558 aa5.57□□□□□ -1.52
VPS4B-205ENST00000591383 MT-ND5P03915 603 aa5.57□□□□□ -1.52
VPS4B-205ENST00000591383 HMGN1P05114 100 aa5.57□□□□□ -1.52
VPS4B-205ENST00000591383 ANXA2P07355 339 aaKnown RBP5.57□□□□□ -1.52
VPS4B-205ENST00000591383 SPARCP09486 303 aa5.57□□□□□ -1.52
VPS4B-205ENST00000591383 PATE4P0C8F1 98 aa5.57□□□□□ -1.52
VPS4B-205ENST00000591383 PRR23D2P0DMB1 279 aaPredicted RBP5.57□□□□□ -1.52
VPS4B-205ENST00000591383 OR8G3PP0DMU2 310 aa5.57□□□□□ -1.52
VPS4B-205ENST00000591383 CLUP10909 449 aa5.57□□□□□ -1.52
VPS4B-205ENST00000591383 GYPEP15421 78 aa5.57□□□□□ -1.52
VPS4B-205ENST00000591383 SPI1P17947 270 aa5.57□□□□□ -1.52
VPS4B-205ENST00000591383 CRYGSP22914 178 aa5.57□□□□□ -1.52
VPS4B-205ENST00000591383 LAP3P28838 519 aa5.57□□□□□ -1.52
VPS4B-205ENST00000591383 POLR2IP36954 125 aaKnown RBP5.57□□□□□ -1.52
VPS4B-205ENST00000591383 NAA10P41227 235 aaPredicted RBP5.57□□□□□ -1.52
VPS4B-205ENST00000591383 PCYT1AP49585 367 aa5.57□□□□□ -1.52
VPS4B-205ENST00000591383 CDH11P55287 796 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms