RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 ZNF251Q9BRH9 671 aa5.65□□□□□ -1.51
SMAD4-212ENST00000591126 NICN1Q9BSH3 213 aa5.65□□□□□ -1.51
SMAD4-212ENST00000591126 SHARPINQ9H0F6 387 aa5.65□□□□□ -1.51
SMAD4-212ENST00000591126 COQ10BQ9H8M1 238 aa5.65□□□□□ -1.51
SMAD4-212ENST00000591126 VAPAQ9P0L0 249 aa5.65□□□□□ -1.51
SMAD4-212ENST00000591126 SLC23A1Q9UHI7 598 aa5.65□□□□□ -1.51
SMAD4-212ENST00000591126 NUDT19A8MXV4 375 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 H7C2Y5 167 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 CYR61O00622 381 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 GPR37O15354 613 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 SFTPBP07988 381 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 CSF2RBP32927 897 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 RNF144AP50876 292 aaPredicted RBP5.64□□□□□ -1.51
SMAD4-212ENST00000591126 ZXDBP98169 803 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 SHEQ5VZ18 495 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 RDH10Q8IZV5 341 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 BMPERQ8N8U9 685 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 C3orf49Q96BT1 292 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 KCTD12Q96CX2 325 aaKnown RBP5.64□□□□□ -1.51
SMAD4-212ENST00000591126 PCDHAC1Q9H158 963 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 RLIMQ9NVW2 624 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 CISD1Q9NZ45 108 aaKnown RBP5.64□□□□□ -1.51
SMAD4-212ENST00000591126 GIMAP2Q9UG22 337 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 CACNG2Q9Y698 323 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 PRRC2BQ5JSZ5 2229 aaKnown RBP5.64□□□□□ -1.51
SMAD4-212ENST00000591126 A0A0B4J203 849 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 RPS10-NUDT3A0A1W2PQS6 291 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 DLGAP1O14490 977 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 DENRO43583 198 aaKnown RBP5.64□□□□□ -1.51
SMAD4-212ENST00000591126 SEC14L2O76054 403 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 MPIG6BO95866 241 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 HPNP05981 417 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 CSF1P09603 554 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 NAT2P11245 290 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 BMP2P12643 396 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 ARSBP15848 533 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 PRKACAP17612 351 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 CELP19835 753 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 SLC2A5P22732 501 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 HTR1FP30939 366 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 FOXA1P55317 472 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 SORDQ00796 357 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 NSUN5P2Q63ZY6 315 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 PLXDC2Q6UX71 529 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 SGPP2Q8IWX5 399 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 PARP8Q8N3A8 854 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 OR6T1Q8NGN1 323 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 MAL2Q969L2 176 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 UBE2FQ969M7 185 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 SLAMF6Q96DU3 332 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 ZMYND19Q96E35 227 aaPredicted RBP5.64□□□□□ -1.51
SMAD4-212ENST00000591126 PRRT1Q99946 306 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 CCDC32Q9BV29 185 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 PTDSS2Q9BVG9 487 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 TMED9Q9BVK6 235 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 BABAM2Q9NXR7 383 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 ZNF224Q9NZL3 707 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 SPATA2Q9UM82 520 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 FOXS1O43638 330 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 WISP1O95388 367 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 IFNA1P01562 189 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 SBK2P0C263 348 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 OR5H8P0DN80 308 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 RFC3P40938 356 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 ZNF117Q03924 483 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 ZNF91Q05481 1191 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 SKP2Q13309 424 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 ZNF554Q86TJ5 538 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 ADGRG3Q86Y34 549 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 PELI3Q8N2H9 469 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 OR6M1Q8NGM8 313 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 ANKRD9Q96BM1 317 aaPredicted RBP5.64□□□□□ -1.51
SMAD4-212ENST00000591126 C7orf50Q9BRJ6 194 aaKnown RBP5.64□□□□□ -1.51
SMAD4-212ENST00000591126 LIN7BQ9HAP6 207 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 ERVK13-1Q9NX77 482 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 PIGLQ9Y2B2 252 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 ETV7Q9Y603 341 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 NPTNQ9Y639 398 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 F5P12259 2224 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 TRAV27A0A087WT01 109 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 F2RL2O00254 374 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 CA11O75493 328 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 SLC25A16P16260 332 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 TIMP3P35625 211 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 PRAMEF17Q5VTA0 474 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 SLC25A42Q86VD7 318 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 SYS1Q8N2H4 156 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 INO80EQ8NBZ0 244 aaPredicted RBP5.64□□□□□ -1.51
SMAD4-212ENST00000591126 OR13C2Q8NGS9 318 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 OR51F2Q8NH61 342 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 RPEQ96AT9 228 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 ADAT1Q9BUB4 502 aaKnown RBP5.64□□□□□ -1.51
SMAD4-212ENST00000591126 GHITMQ9H3K2 345 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 RHOFQ9HBH0 211 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 SH2B3Q9UQQ2 575 aa5.64□□□□□ -1.51
SMAD4-212ENST00000591126 C7orf72A4D263 438 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 CD300LBA8K4G0 201 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 OR7C1O76099 320 aaPredicted RBP5.63□□□□□ -1.51
SMAD4-212ENST00000591126 IGF2P01344 180 aa5.63□□□□□ -1.51
SMAD4-212ENST00000591126 AKR1C4P17516 323 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms