RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 M1APQ8TC57 530 aa17.08■□□□□ 0.33
PRKCSH-209ENST00000589838 AKIRIN1Q9H9L7 192 aaPredicted RBP17.08■□□□□ 0.33
PRKCSH-209ENST00000589838 DLL4Q9NR61 685 aa17.08■□□□□ 0.33
PRKCSH-209ENST00000589838 CHCHD2Q9Y6H1 151 aaPredicted RBP17.08■□□□□ 0.33
PRKCSH-209ENST00000589838 IGHV1-45A0A0A0MS14 117 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 LOC102725191A0A1B0GVB3 256 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 A0A1W2PPL8 197 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 TLX3O43711 291 aaPredicted RBP17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 CREBL2O60519 120 aaPredicted RBP17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 PGA4P0DJD7 388 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 PGA3P0DJD8 388 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 GABRA1P14867 456 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 MC2RQ01718 297 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 RHOUQ7L0Q8 258 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 ADGRE4PQ86SQ3 457 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 ELMOD2Q8IZ81 293 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 SPICQ8N5J4 248 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 MEIOBQ8N635 442 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 WDSUB1Q8N9V3 476 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 RADILQ96JH8 1075 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 GPR137Q96N19 417 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 SORCS2Q96PQ0 1159 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 SCPEP1Q9HB40 452 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 NPDC1Q9NQX5 325 aaPredicted RBP17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 RYDENQ9NUL5 291 aaKnown RBP17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 PTRH2Q9Y3E5 179 aaKnown RBP17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 TRIOBPQ9H2D6 2365 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 LOC390937A0A1W2PQ73 354 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 P2RY10O00398 339 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 EIF1AYO14602 144 aaKnown RBP17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 SNAPC5O75971 98 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 NR2C1P13056 603 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 ZNF43P17038 809 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 DNASE1P24855 282 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 P2RY4P51582 365 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 ZFP36L1Q07352 338 aaKnown RBP17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 CAMK2DQ13557 499 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 CORO6Q6QEF8 472 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 JAGN1Q8N5M9 183 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 IMMP1LQ96LU5 166 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 SLCO5A1Q9H2Y9 848 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 MOB1AQ9H8S9 216 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 FAM206AQ9NX38 181 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 POLR1DQ9Y2S0 133 aa17.07■□□□□ 0.32
PRKCSH-209ENST00000589838 A0A1W2PNR3 127 aa17.06■□□□□ 0.32
PRKCSH-209ENST00000589838 DCDC2BA2VCK2 349 aa17.06■□□□□ 0.32
PRKCSH-209ENST00000589838 ZNF726A6NNF4 738 aa17.06■□□□□ 0.32
PRKCSH-209ENST00000589838 ALX3O95076 343 aa17.06■□□□□ 0.32
PRKCSH-209ENST00000589838 GTF2F2P13984 249 aa17.06■□□□□ 0.32
PRKCSH-209ENST00000589838 RAD52P43351 418 aa17.06■□□□□ 0.32
PRKCSH-209ENST00000589838 RIPPLY1Q0D2K3 151 aa17.06■□□□□ 0.32
PRKCSH-209ENST00000589838 TMEM176BQ3YBM2 270 aaPredicted RBP17.06■□□□□ 0.32
PRKCSH-209ENST00000589838 FAM198BQ6UWH4 519 aa17.06■□□□□ 0.32
PRKCSH-209ENST00000589838 GPAT4Q86UL3 456 aa17.06■□□□□ 0.32
PRKCSH-209ENST00000589838 OR4C16Q8NGL9 310 aa17.06■□□□□ 0.32
PRKCSH-209ENST00000589838 TMEM185BQ9H7F4 350 aa17.06■□□□□ 0.32
PRKCSH-209ENST00000589838 SULT2B1O00204 365 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 TRAF3IP2O43734 574 aaPredicted RBP17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 ACSM4P0C7M7 580 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 ZNF28P17035 718 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 RAB6AP20340 208 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 BDKRB2P30411 391 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 SPOCK1Q08629 439 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 INPP5JQ15735 1006 aaPredicted RBP17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 SLC25A47Q6Q0C1 308 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 Q7L0L9 218 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 OR5M1Q8NGP8 315 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 GPX8Q8TED1 209 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 SNAPC3Q92966 411 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 MS4A3Q96HJ5 214 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 ZC3H10Q96K80 434 aaKnown RBP17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 PBOV1Q9GZY1 135 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 SEC61A2Q9H9S3 476 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 CGGBP1Q9UFW8 167 aaPredicted RBP17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 MRPS18BQ9Y676 258 aaKnown RBP17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 AQP7P3A6NL99 342 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 ZNF878C9JN71 531 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 KDM4BO94953 1096 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 LPLP06858 475 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 UMODP07911 640 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 HSD11B1P28845 292 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 ZP1P60852 638 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 TAF13Q15543 124 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 KCNMB1Q16558 191 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 ZNF626Q68DY1 528 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 FAAP20Q6NZ36 180 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 SEZ6L2Q6UXD5 910 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 Q6ZTK2 550 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 NLRC3Q7RTR2 1065 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 GTPBP8Q8N3Z3 284 aaPredicted RBP17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 OR2I1PQ8NGU4 316 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 ZNF69Q9UC07 566 aa17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 ZNF107Q9UII5 783 aaPredicted RBP17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 GDF2Q9UK05 429 aaPredicted RBP17.05■□□□□ 0.32
PRKCSH-209ENST00000589838 UBE2QL1A1L167 161 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 ANKRD34BA5PLL1 514 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 METTL21EPA6NDL7 271 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 LDLRAD4O15165 306 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 SYT7O43581 403 aa17.04■□□□□ 0.32
PRKCSH-209ENST00000589838 PMS2P2O95744 297 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms