RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	SPIC	Q8N5J4	248 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	SLC25A43	Q8WUT9	341 aa	Predicted RBP	13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	CNN2	Q99439	309 aa	Known RBP	13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	ALG12	Q9BV10	488 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	DNTTIP1	Q9H147	329 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	SAV1	Q9H4B6	383 aa	Predicted RBP	13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	ZMIZ1	Q9ULJ6	1067 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318		A0A1W2PNR3	127 aa		13.75	□□□□□ -0.21
DDX39A-209	ENST00000589318	FAM171A2	A8MVW0	826 aa		13.75	□□□□□ -0.21
DDX39A-209	ENST00000589318		H7C2Y5	167 aa		13.75	□□□□□ -0.21
DDX39A-209	ENST00000589318		L7N2F9	121 aa		13.75	□□□□□ -0.21
DDX39A-209	ENST00000589318	SELENOF	O60613	162 aa		13.75	□□□□□ -0.21
DDX39A-209	ENST00000589318	AKR7A3	O95154	331 aa		13.75	□□□□□ -0.21
DDX39A-209	ENST00000589318	OR6A2	O95222	327 aa		13.75	□□□□□ -0.21
DDX39A-209	ENST00000589318	ITGA3	P26006	1051 aa		13.75	□□□□□ -0.21
DDX39A-209	ENST00000589318	ACVR1B	P36896	505 aa		13.75	□□□□□ -0.21
DDX39A-209	ENST00000589318	NAA10	P41227	235 aa	Predicted RBP	13.75	□□□□□ -0.21
DDX39A-209	ENST00000589318	FGL1	Q08830	312 aa		13.75	□□□□□ -0.21
DDX39A-209	ENST00000589318	SRSF6	Q13247	344 aa	Known RBP	13.75	□□□□□ -0.21
DDX39A-209	ENST00000589318	VASN	Q6EMK4	673 aa		13.75	□□□□□ -0.21
DDX39A-209	ENST00000589318	NHLRC1	Q6VVB1	395 aa		13.75	□□□□□ -0.21
DDX39A-209	ENST00000589318	ASB18	Q6ZVZ8	466 aa		13.75	□□□□□ -0.21
DDX39A-209	ENST00000589318	STPG2	Q8N412	459 aa		13.75	□□□□□ -0.21
DDX39A-209	ENST00000589318	TOMM5	Q8N4H5	51 aa		13.75	□□□□□ -0.21
DDX39A-209	ENST00000589318	ZFP41	Q8N8Y5	198 aa		13.75	□□□□□ -0.21
DDX39A-209	ENST00000589318	OR6K6	Q8NGW6	343 aa		13.75	□□□□□ -0.21
DDX39A-209	ENST00000589318	CACNG6	Q9BXT2	260 aa		13.75	□□□□□ -0.21
DDX39A-209	ENST00000589318	SYT4	Q9H2B2	425 aa		13.75	□□□□□ -0.21
DDX39A-209	ENST00000589318	B3GAT1	Q9P2W7	334 aa		13.75	□□□□□ -0.21
DDX39A-209	ENST00000589318	PURG	Q9UJV8	347 aa	Known RBP	13.75	□□□□□ -0.21
DDX39A-209	ENST00000589318	B3GALT5	Q9Y2C3	310 aa		13.75	□□□□□ -0.21
DDX39A-209	ENST00000589318		A0A1W2PNV4	684 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	OR2M5	A3KFT3	312 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	PINLYP	A6NC86	204 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	DNASE2	O00115	360 aa	Predicted RBP	13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	GABRP	O00591	440 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	GIP	P09681	153 aa	Predicted RBP	13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	LIPC	P11150	499 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	CAV3	P56539	151 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	BDH1	Q02338	343 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	OC90	Q02509	493 aa	Predicted RBP	13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	TLE3	Q04726	772 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	MELK	Q14680	651 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	ABHD17B	Q5VST6	288 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	EEF1A1P5	Q5VTE0	462 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	SPINK14	Q6IE38	97 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	NLRC3	Q7RTR2	1065 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	VASH2	Q86V25	355 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	SLC39A7	Q92504	469 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	FER1L6-AS2	Q96M78	137 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	C5orf34	Q96MH7	638 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	SIGLEC12	Q96PQ1	595 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	OR5B2	Q96R09	309 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	RNF32	Q9H0A6	362 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	SRA1	Q9HD15	236 aa	Known RBP	13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	VSX1	Q9NZR4	365 aa	Predicted RBP	13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	LRFN1	Q9P244	771 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	MOK	Q9UQ07	419 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	ZFHX4	Q86UP3	3567 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	KIAA1549	Q9HCM3	1950 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	PLSCR5	A0PG75	271 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	PRSS37	A4D1T9	235 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	NPIPB13	A6NJU9	1138 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	NPIPB4	C9JG80	1138 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	S100A6	P06703	90 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	RFPL3S	P0C7P2	107 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	OR2T7	P0C7T2	308 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	ZNF17	P17021	662 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	FKBP2	P26885	142 aa	Known RBP	13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	SFTPD	P35247	375 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	B3GALT5-AS1	P59052	145 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	RAP2B	P61225	183 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	ACTC1	P68032	377 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	ACTA1	P68133	377 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	FOXO1	Q12778	655 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	ST3GAL2	Q16842	350 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	TMEM176B	Q3YBM2	270 aa	Predicted RBP	13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	METTL11B	Q5VVY1	283 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	TMEM91	Q6ZNR0	172 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	KLB	Q86Z14	1044 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	PDZD9	Q8IXQ8	264 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	SLC35F2	Q8IXU6	374 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	ZNF511	Q8NB15	262 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	ADPRHL1	Q8NDY3	354 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	OR2T27	Q8NH04	317 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	CYB5R1	Q9UHQ9	305 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	DKKL1	Q9UK85	242 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	SPATA2	Q9UM82	520 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	MRPS7	Q9Y2R9	242 aa	Known RBP	13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	HDGFL3	Q9Y3E1	203 aa		13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	SIRT4	Q9Y6E7	314 aa	Predicted RBP	13.74	□□□□□ -0.21
DDX39A-209	ENST00000589318	ZNF814	B7Z6K7	855 aa		13.73	□□□□□ -0.21
DDX39A-209	ENST00000589318	PEX14	O75381	377 aa		13.73	□□□□□ -0.21
DDX39A-209	ENST00000589318	RP2	O75695	350 aa		13.73	□□□□□ -0.21
DDX39A-209	ENST00000589318	REN	P00797	406 aa		13.73	□□□□□ -0.21
DDX39A-209	ENST00000589318	SRD5A2	P31213	254 aa		13.73	□□□□□ -0.21
DDX39A-209	ENST00000589318	MMP15	P51511	669 aa		13.73	□□□□□ -0.21
DDX39A-209	ENST00000589318	ZNF239	Q16600	458 aa	Known RBP	13.73	□□□□□ -0.21
DDX39A-209	ENST00000589318	SLC36A2	Q495M3	483 aa		13.73	□□□□□ -0.21
DDX39A-209	ENST00000589318	RAET1L	Q5VY80	246 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms