RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 C16orf87Q6PH81 154 aa11.74□□□□□ -0.53
VMP1-209ENST00000588915 OAFQ86UD1 273 aa11.74□□□□□ -0.53
VMP1-209ENST00000588915 PARP8Q8N3A8 854 aa11.74□□□□□ -0.53
VMP1-209ENST00000588915 OR5L1Q8NGL2 311 aa11.74□□□□□ -0.53
VMP1-209ENST00000588915 RAB40AQ8WXH6 277 aa11.74□□□□□ -0.53
VMP1-209ENST00000588915 LZICQ8WZA0 190 aa11.74□□□□□ -0.53
VMP1-209ENST00000588915 UPRTQ96BW1 309 aa11.74□□□□□ -0.53
VMP1-209ENST00000588915 DUX5Q96PT3 197 aa11.74□□□□□ -0.53
VMP1-209ENST00000588915 OR2V2Q96R30 315 aa11.74□□□□□ -0.53
VMP1-209ENST00000588915 SSBP3Q9BWW4 388 aaPredicted RBP11.74□□□□□ -0.53
VMP1-209ENST00000588915 PRDM13Q9H4Q3 707 aa11.74□□□□□ -0.53
VMP1-209ENST00000588915 TMEM165Q9HC07 324 aa11.74□□□□□ -0.53
VMP1-209ENST00000588915 ATPIF1Q9UII2 106 aa11.74□□□□□ -0.53
VMP1-209ENST00000588915 STARD10Q9Y365 291 aa11.74□□□□□ -0.53
VMP1-209ENST00000588915 FXYD1O00168 92 aa11.73□□□□□ -0.53
VMP1-209ENST00000588915 PIP5K1CO60331 668 aa11.73□□□□□ -0.53
VMP1-209ENST00000588915 DOK2O60496 412 aa11.73□□□□□ -0.53
VMP1-209ENST00000588915 PLATP00750 562 aa11.73□□□□□ -0.53
VMP1-209ENST00000588915 SCG5P05408 212 aa11.73□□□□□ -0.53
VMP1-209ENST00000588915 CD14P08571 375 aa11.73□□□□□ -0.53
VMP1-209ENST00000588915 HTR5AP47898 357 aa11.73□□□□□ -0.53
VMP1-209ENST00000588915 RGS6P49758 472 aa11.73□□□□□ -0.53
VMP1-209ENST00000588915 LSM6P62312 80 aaKnown RBP11.73□□□□□ -0.53
VMP1-209ENST00000588915 AQP6Q13520 282 aa11.73□□□□□ -0.53
VMP1-209ENST00000588915 ZNF362Q5T0B9 420 aaPredicted RBP11.73□□□□□ -0.53
VMP1-209ENST00000588915 VASH1Q7L8A9 365 aaPredicted RBP11.73□□□□□ -0.53
VMP1-209ENST00000588915 NRMQ8IXM6 262 aa11.73□□□□□ -0.53
VMP1-209ENST00000588915 OFCC1Q8IZS5 231 aa11.73□□□□□ -0.53
VMP1-209ENST00000588915 OR13G1Q8NGZ3 307 aa11.73□□□□□ -0.53
VMP1-209ENST00000588915 OR51A7Q8NH64 312 aa11.73□□□□□ -0.53
VMP1-209ENST00000588915 C10orf82Q8WW14 230 aa11.73□□□□□ -0.53
VMP1-209ENST00000588915 RASD2Q96D21 266 aa11.73□□□□□ -0.53
VMP1-209ENST00000588915 PLEKHA8Q96JA3 519 aa11.73□□□□□ -0.53
VMP1-209ENST00000588915 C1QTNF5Q9BXJ0 243 aa11.73□□□□□ -0.53
VMP1-209ENST00000588915 POFUT1Q9H488 388 aa11.73□□□□□ -0.53
VMP1-209ENST00000588915 GRHPRQ9UBQ7 328 aa11.73□□□□□ -0.53
VMP1-209ENST00000588915 IGHV2-70DA0A0C4DH43 119 aa11.72□□□□□ -0.53
VMP1-209ENST00000588915 KIR2DS1A0A191URI9 304 aa11.72□□□□□ -0.53
VMP1-209ENST00000588915 OR6C6A6NF89 314 aa11.72□□□□□ -0.53
VMP1-209ENST00000588915 BBIP1A8MTZ0 92 aa11.72□□□□□ -0.53
VMP1-209ENST00000588915 EFCAB9A8MZ26 197 aa11.72□□□□□ -0.53
VMP1-209ENST00000588915 XKRYO14609 159 aa11.72□□□□□ -0.53
VMP1-209ENST00000588915 SRP9P49458 86 aaKnown RBP11.72□□□□□ -0.53
VMP1-209ENST00000588915 MMP16P51512 607 aa11.72□□□□□ -0.53
VMP1-209ENST00000588915 DEFA6Q01524 100 aa11.72□□□□□ -0.53
VMP1-209ENST00000588915 TRAM2Q15035 370 aa11.72□□□□□ -0.53
VMP1-209ENST00000588915 FBXW12Q6X9E4 464 aa11.72□□□□□ -0.53
VMP1-209ENST00000588915 TMPRSS11FQ6ZWK6 438 aa11.72□□□□□ -0.53
VMP1-209ENST00000588915 IGFN1Q86VF2 1251 aa11.72□□□□□ -0.53
VMP1-209ENST00000588915 ATG16L2Q8NAA4 619 aa11.72□□□□□ -0.53
VMP1-209ENST00000588915 OR8G5Q8NG78 346 aa11.72□□□□□ -0.53
VMP1-209ENST00000588915 ACOT11Q8WXI4 607 aaPredicted RBP11.72□□□□□ -0.53
VMP1-209ENST00000588915 DACT3Q96B18 629 aaPredicted RBP11.72□□□□□ -0.53
VMP1-209ENST00000588915 TMIGD2Q96BF3 282 aa11.72□□□□□ -0.53
VMP1-209ENST00000588915 NEIL1Q96FI4 390 aaPredicted RBP11.72□□□□□ -0.53
VMP1-209ENST00000588915 FNDC11Q9BVV2 318 aa11.72□□□□□ -0.53
VMP1-209ENST00000588915 NDEL1Q9GZM8 345 aa11.72□□□□□ -0.53
VMP1-209ENST00000588915 EMC7Q9NPA0 242 aa11.72□□□□□ -0.53
VMP1-209ENST00000588915 TRAV27A0A087WT01 109 aa11.71□□□□□ -0.53
VMP1-209ENST00000588915 TEX13CA0A0J9YWL9 993 aa11.71□□□□□ -0.53
VMP1-209ENST00000588915 PRSS37A4D1T9 235 aa11.71□□□□□ -0.53
VMP1-209ENST00000588915 LRRC30A6NM36 301 aa11.71□□□□□ -0.53
VMP1-209ENST00000588915 FAM220BPB1ANY3 271 aa11.71□□□□□ -0.53
VMP1-209ENST00000588915 EDF1O60869 148 aaKnown RBP11.71□□□□□ -0.53
VMP1-209ENST00000588915 IGHV4-38-2P0DP08 117 aa11.71□□□□□ -0.53
VMP1-209ENST00000588915 RPS2P15880 293 aaKnown RBP11.71□□□□□ -0.53
VMP1-209ENST00000588915 GNB2P62879 340 aa11.71□□□□□ -0.53
VMP1-209ENST00000588915 MAPRE2Q15555 327 aa11.71□□□□□ -0.53
VMP1-209ENST00000588915 LRRC23Q53EV4 343 aaPredicted RBP11.71□□□□□ -0.53
VMP1-209ENST00000588915 MBOAT2Q6ZWT7 520 aa11.71□□□□□ -0.53
VMP1-209ENST00000588915 KLBQ86Z14 1044 aa11.71□□□□□ -0.53
VMP1-209ENST00000588915 C1orf87Q8N0U7 546 aa11.71□□□□□ -0.53
VMP1-209ENST00000588915 POU5F2Q8N7G0 328 aa11.71□□□□□ -0.53
VMP1-209ENST00000588915 OR1F12Q8NHA8 337 aa11.71□□□□□ -0.53
VMP1-209ENST00000588915 TPD52L3Q96J77 140 aa11.71□□□□□ -0.53
VMP1-209ENST00000588915 MEGF10Q96KG7 1140 aa11.71□□□□□ -0.53
VMP1-209ENST00000588915 ZNF582Q96NG8 517 aaPredicted RBP11.71□□□□□ -0.53
VMP1-209ENST00000588915 GID8Q9NWU2 228 aa11.71□□□□□ -0.53
VMP1-209ENST00000588915 AP3M1Q9Y2T2 418 aa11.71□□□□□ -0.53
VMP1-209ENST00000588915 DOCK11Q5JSL3 2073 aa11.71□□□□□ -0.54
VMP1-209ENST00000588915 A0A0G2JND7 137 aa11.7□□□□□ -0.54
VMP1-209ENST00000588915 A0A1B0GWJ7 208 aa11.7□□□□□ -0.54
VMP1-209ENST00000588915 ELOVL7A1L3X0 281 aa11.7□□□□□ -0.54
VMP1-209ENST00000588915 KHDRBS3O75525 346 aaKnown RBP11.7□□□□□ -0.54
VMP1-209ENST00000588915 IFNW1P05000 195 aa11.7□□□□□ -0.54
VMP1-209ENST00000588915 RPL4P36578 427 aaKnown RBP11.7□□□□□ -0.54
VMP1-209ENST00000588915 KCNMB1Q16558 191 aa11.7□□□□□ -0.54
VMP1-209ENST00000588915 ZBED5Q49AG3 693 aa11.7□□□□□ -0.54
VMP1-209ENST00000588915 TTMPQ5BVD1 217 aa11.7□□□□□ -0.54
VMP1-209ENST00000588915 MESTQ5EB52 335 aa11.7□□□□□ -0.54
VMP1-209ENST00000588915 GPR139Q6DWJ6 353 aa11.7□□□□□ -0.54
VMP1-209ENST00000588915 NLRC3Q7RTR2 1065 aa11.7□□□□□ -0.54
VMP1-209ENST00000588915 FAM122BQ7Z309 247 aa11.7□□□□□ -0.54
VMP1-209ENST00000588915 GLB1L2Q8IW92 636 aa11.7□□□□□ -0.54
VMP1-209ENST00000588915 OR2T12Q8NG77 320 aa11.7□□□□□ -0.54
VMP1-209ENST00000588915 OR8B3Q8NGG8 313 aa11.7□□□□□ -0.54
VMP1-209ENST00000588915 ERGIC1Q969X5 290 aa11.7□□□□□ -0.54
VMP1-209ENST00000588915 APOBEC3DQ96AK3 386 aaPredicted RBP11.7□□□□□ -0.54
VMP1-209ENST00000588915 Q96M85 177 aa11.7□□□□□ -0.54
VMP1-209ENST00000588915 OR8B2Q96RD0 313 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms