RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 BEST4Q8NFU0 473 aa6.42□□□□□ -1.38
SPIDR-228ENST00000588781 OR2AK2Q8NG84 335 aa6.42□□□□□ -1.38
SPIDR-228ENST00000588781 OR4K17Q8NGC6 315 aa6.42□□□□□ -1.38
SPIDR-228ENST00000588781 OR5D14Q8NGL3 314 aa6.42□□□□□ -1.38
SPIDR-228ENST00000588781 OR1J4Q8NGS1 313 aa6.42□□□□□ -1.38
SPIDR-228ENST00000588781 RNF133Q8WVZ7 376 aa6.42□□□□□ -1.38
SPIDR-228ENST00000588781 PIGKQ92643 395 aa6.42□□□□□ -1.38
SPIDR-228ENST00000588781 ATOH1Q92858 354 aaPredicted RBP6.42□□□□□ -1.38
SPIDR-228ENST00000588781 CLDN23Q96B33 292 aa6.42□□□□□ -1.38
SPIDR-228ENST00000588781 ZBTB8AQ96BR9 441 aa6.42□□□□□ -1.38
SPIDR-228ENST00000588781 SCGB3A2Q96PL1 93 aa6.42□□□□□ -1.38
SPIDR-228ENST00000588781 CITED4Q96RK1 184 aa6.42□□□□□ -1.38
SPIDR-228ENST00000588781 KCNK17Q96T54 332 aa6.42□□□□□ -1.38
SPIDR-228ENST00000588781 SEC22CQ9BRL7 303 aa6.42□□□□□ -1.38
SPIDR-228ENST00000588781 DPCDQ9BVM2 203 aaPredicted RBP6.42□□□□□ -1.38
SPIDR-228ENST00000588781 SLC26A1Q9H2B4 701 aa6.42□□□□□ -1.38
SPIDR-228ENST00000588781 CCDC86Q9H6F5 360 aaKnown RBP6.42□□□□□ -1.38
SPIDR-228ENST00000588781 APMAPQ9HDC9 416 aa6.42□□□□□ -1.38
SPIDR-228ENST00000588781 TMEM138Q9NPI0 162 aa6.42□□□□□ -1.38
SPIDR-228ENST00000588781 PRMT8Q9NR22 394 aaPredicted RBP6.42□□□□□ -1.38
SPIDR-228ENST00000588781 TAS2R4Q9NYW5 299 aa6.42□□□□□ -1.38
SPIDR-228ENST00000588781 CTSFQ9UBX1 484 aa6.42□□□□□ -1.38
SPIDR-228ENST00000588781 FBLN5Q9UBX5 448 aa6.42□□□□□ -1.38
SPIDR-228ENST00000588781 SLC22A13Q9Y226 551 aa6.42□□□□□ -1.38
SPIDR-228ENST00000588781 PLEKHA6Q9Y2H5 1048 aa6.42□□□□□ -1.38
SPIDR-228ENST00000588781 POLR1DQ9Y2S0 133 aa6.42□□□□□ -1.38
SPIDR-228ENST00000588781 EMC9Q9Y3B6 208 aa6.42□□□□□ -1.38
SPIDR-228ENST00000588781 AUP1Q9Y679 476 aa6.42□□□□□ -1.38
SPIDR-228ENST00000588781 CHD8Q9HCK8 2581 aa6.42□□□□□ -1.38
SPIDR-228ENST00000588781 THADAQ6YHU6 1953 aa6.42□□□□□ -1.38
SPIDR-228ENST00000588781 TDRD6O60522 2096 aaKnown RBP6.41□□□□□ -1.38
SPIDR-228ENST00000588781 NCOR2Q9Y618 2525 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 LOC102725191A0A1B0GVB3 256 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 MED19A0JLT2 244 aaPredicted RBP6.41□□□□□ -1.38
SPIDR-228ENST00000588781 CIB4A0PJX0 185 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 TMEM82A0PJX8 343 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 OR2M5A3KFT3 312 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 OR6C65A6NJZ3 312 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 ZNF726A6NNF4 738 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 ZNF736B4DX44 427 aaPredicted RBP6.41□□□□□ -1.38
SPIDR-228ENST00000588781 ZNF878C9JN71 531 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 MS4A18H0YCH9 400 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 ERVH48-1M5A8F1 160 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 AGRPO00253 132 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 SHOXO15266 292 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 SYT7O43581 403 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 PRKNO60260 465 aaPredicted RBP6.41□□□□□ -1.38
SPIDR-228ENST00000588781 SRSF10O75494 262 aaKnown RBP6.41□□□□□ -1.38
SPIDR-228ENST00000588781 IGHEP01854 428 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 ITGA5P08648 1049 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 FBXO45P0C2W1 286 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 ATXN8OSP0DMR3 200 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 M6PRP20645 277 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 EPHA8P29322 1005 aaPredicted RBP6.41□□□□□ -1.38
SPIDR-228ENST00000588781 HOXA6P31267 233 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 NBL1P41271 181 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 CBX5P45973 191 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 BIDP55957 195 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 P2RX3P56373 397 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 TAS2R31P59538 309 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 ZP1P60852 638 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 SEC61A1P61619 476 aaKnown RBP6.41□□□□□ -1.38
SPIDR-228ENST00000588781 GRB2P62993 217 aaKnown RBP6.41□□□□□ -1.38
SPIDR-228ENST00000588781 CFHR1Q03591 330 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 PMPCAQ10713 525 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 FOXF1Q12946 379 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 TRA2AQ13595 282 aaKnown RBP eCLIP6.41□□□□□ -1.38
SPIDR-228ENST00000588781 EXT1Q16394 746 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 ZNF239Q16600 458 aaKnown RBP6.41□□□□□ -1.38
SPIDR-228ENST00000588781 ODF4Q2M2E3 257 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 MS4A18Q3C1V0 323 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 LGALSLQ3ZCW2 172 aaPredicted RBP6.41□□□□□ -1.38
SPIDR-228ENST00000588781 C4orf46Q504U0 113 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 GLYATL3Q5SZD4 288 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 C1QL3Q5VWW1 255 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 RTL6Q6ICC9 239 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 FAHD2BQ6P2I3 314 aaPredicted RBP6.41□□□□□ -1.38
SPIDR-228ENST00000588781 MTFR2Q6P444 385 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 TMEM81Q6P7N7 255 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 LRFN4Q6PJG9 635 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 TSSK4Q6SA08 328 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 OPN5Q6U736 354 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 C3P1Q6ZMU1 363 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 MAMSTRQ6ZN01 415 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 Q6ZTK2 550 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 LANCL3Q6ZV70 420 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 SLC36A1Q7Z2H8 476 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 PPP1R3BQ86XI6 285 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 ELMOD2Q8IZ81 293 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 C12orf45Q8N5I9 185 aaPredicted RBP6.41□□□□□ -1.38
SPIDR-228ENST00000588781 ZDHHC22Q8N966 263 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 DTWD2Q8NBA8 298 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 CLEC1AQ8NC01 280 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 APCDD1LQ8NCL9 501 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 NOXO1Q8NFA2 376 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 OR10AC1Q8NH08 325 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 OR6X1Q8NH79 312 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 CEP76Q8TAP6 659 aa6.41□□□□□ -1.38
SPIDR-228ENST00000588781 SLC25A28Q96A46 364 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms