RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 RGS9O75916 674 aaPredicted RBP22.86■■□□□ 1.25
SCAMP4-210ENST00000588555 TPOP07202 933 aa22.86■■□□□ 1.25
SCAMP4-210ENST00000588555 CST2P09228 141 aa22.86■■□□□ 1.25
SCAMP4-210ENST00000588555 H2BFMP0C1H6 154 aa22.86■■□□□ 1.25
SCAMP4-210ENST00000588555 KIR3DL2P43630 455 aa22.86■■□□□ 1.25
SCAMP4-210ENST00000588555 MFGE8Q08431 387 aaPredicted RBP22.86■■□□□ 1.25
SCAMP4-210ENST00000588555 SF3B4Q15427 424 aaKnown RBP eCLIP22.86■■□□□ 1.25
SCAMP4-210ENST00000588555 PRR30Q53SZ7 412 aaPredicted RBP22.86■■□□□ 1.25
SCAMP4-210ENST00000588555 ZNF627Q7L945 461 aa22.86■■□□□ 1.25
SCAMP4-210ENST00000588555 MBD3L2Q8NHZ7 208 aaPredicted RBP22.86■■□□□ 1.25
SCAMP4-210ENST00000588555 ABHD4Q8TB40 342 aa22.86■■□□□ 1.25
SCAMP4-210ENST00000588555 FAM57AQ8TBR7 257 aa22.86■■□□□ 1.25
SCAMP4-210ENST00000588555 UPB1Q9UBR1 384 aa22.86■■□□□ 1.25
SCAMP4-210ENST00000588555 FAM215AQ9Y5M1 114 aa22.86■■□□□ 1.25
SCAMP4-210ENST00000588555 NBEAQ8NFP9 2946 aa22.85■■□□□ 1.25
SCAMP4-210ENST00000588555 CD8BP10966 210 aa22.85■■□□□ 1.25
SCAMP4-210ENST00000588555 DCTDP32321 178 aa22.85■■□□□ 1.25
SCAMP4-210ENST00000588555 WDR38Q5JTN6 314 aa22.85■■□□□ 1.25
SCAMP4-210ENST00000588555 OR2A2Q6IF42 318 aa22.85■■□□□ 1.25
SCAMP4-210ENST00000588555 CD163Q86VB7 1156 aa22.85■■□□□ 1.25
SCAMP4-210ENST00000588555 GJC3Q8NFK1 279 aa22.85■■□□□ 1.25
SCAMP4-210ENST00000588555 OR13C5Q8NGS8 318 aa22.85■■□□□ 1.25
SCAMP4-210ENST00000588555 PTGER4P35408 488 aa22.84■■□□□ 1.25
SCAMP4-210ENST00000588555 KIR2DL2P43627 348 aaPredicted RBP22.84■■□□□ 1.25
SCAMP4-210ENST00000588555 SERPINB10P48595 397 aa22.84■■□□□ 1.25
SCAMP4-210ENST00000588555 CCR9P51686 369 aa22.84■■□□□ 1.25
SCAMP4-210ENST00000588555 ARF1P84077 181 aaKnown RBP22.84■■□□□ 1.25
SCAMP4-210ENST00000588555 FAPQ12884 760 aa22.84■■□□□ 1.25
SCAMP4-210ENST00000588555 FBXW9Q5XUX1 488 aa22.84■■□□□ 1.25
SCAMP4-210ENST00000588555 IL17RDQ8NFM7 739 aa22.84■■□□□ 1.25
SCAMP4-210ENST00000588555 RGP1Q92546 391 aaPredicted RBP22.84■■□□□ 1.25
SCAMP4-210ENST00000588555 SLC25A18Q9H1K4 315 aa22.84■■□□□ 1.25
SCAMP4-210ENST00000588555 DDX28Q9NUL7 540 aaKnown RBP22.84■■□□□ 1.25
SCAMP4-210ENST00000588555 ASF1BQ9NVP2 202 aa22.84■■□□□ 1.25
SCAMP4-210ENST00000588555 ZNF281Q9Y2X9 895 aa22.84■■□□□ 1.25
SCAMP4-210ENST00000588555 R4GMQ9 66 aa22.84■■□□□ 1.25
SCAMP4-210ENST00000588555 SPTA1P02549 2419 aa22.84■■□□□ 1.25
SCAMP4-210ENST00000588555 FIGNL2A6NMB9 653 aa22.84■■□□□ 1.25
SCAMP4-210ENST00000588555 TUBA1BP68363 451 aa22.84■■□□□ 1.25
SCAMP4-210ENST00000588555 KLHL24Q6TFL4 600 aa22.84■■□□□ 1.25
SCAMP4-210ENST00000588555 TFAP2EQ6VUC0 442 aa22.84■■□□□ 1.25
SCAMP4-210ENST00000588555 ZNF813Q6ZN06 617 aa22.84■■□□□ 1.25
SCAMP4-210ENST00000588555 TUBA1AQ71U36 451 aa22.84■■□□□ 1.25
SCAMP4-210ENST00000588555 CATSPERDQ86XM0 798 aa22.84■■□□□ 1.25
SCAMP4-210ENST00000588555 UBE2J2Q8N2K1 259 aa22.84■■□□□ 1.25
SCAMP4-210ENST00000588555 KCTD7Q96MP8 289 aa22.84■■□□□ 1.25
SCAMP4-210ENST00000588555 EMC9Q9Y3B6 208 aa22.84■■□□□ 1.25
SCAMP4-210ENST00000588555 ATRXP46100 2492 aa22.83■■□□□ 1.25
SCAMP4-210ENST00000588555 CCDC92Q53HC0 331 aaPredicted RBP22.83■■□□□ 1.24
SCAMP4-210ENST00000588555 HIST2H2ABQ8IUE6 130 aaPredicted RBP22.83■■□□□ 1.24
SCAMP4-210ENST00000588555 SKA3Q8IX90 412 aa22.83■■□□□ 1.24
SCAMP4-210ENST00000588555 OR5AK2Q8NH90 309 aa22.83■■□□□ 1.24
SCAMP4-210ENST00000588555 GSTK1Q9Y2Q3 226 aa22.83■■□□□ 1.24
SCAMP4-210ENST00000588555 MMP16P51512 607 aa22.82■■□□□ 1.24
SCAMP4-210ENST00000588555 KLRB1Q12918 225 aa22.82■■□□□ 1.24
SCAMP4-210ENST00000588555 C1orf185Q5T7R7 199 aa22.82■■□□□ 1.24
SCAMP4-210ENST00000588555 C9orf135Q5VTT2 229 aa22.82■■□□□ 1.24
SCAMP4-210ENST00000588555 TSC22D3Q99576 134 aa22.82■■□□□ 1.24
SCAMP4-210ENST00000588555 PPIL3Q9H2H8 161 aaKnown RBP22.82■■□□□ 1.24
SCAMP4-210ENST00000588555 G6PC2Q9NQR9 355 aa22.82■■□□□ 1.24
SCAMP4-210ENST00000588555 SLC22A13Q9Y226 551 aa22.82■■□□□ 1.24
SCAMP4-210ENST00000588555 ACACBO00763 2458 aa22.82■■□□□ 1.24
SCAMP4-210ENST00000588555 TMEM212A6NML5 194 aa22.81■■□□□ 1.24
SCAMP4-210ENST00000588555 TOXO94900 526 aa22.81■■□□□ 1.24
SCAMP4-210ENST00000588555 ABOP16442 354 aa22.81■■□□□ 1.24
SCAMP4-210ENST00000588555 FOXF2Q12947 444 aa22.81■■□□□ 1.24
SCAMP4-210ENST00000588555 ACSM3Q53FZ2 586 aa22.81■■□□□ 1.24
SCAMP4-210ENST00000588555 YIF1BQ5BJH7 314 aa22.81■■□□□ 1.24
SCAMP4-210ENST00000588555 SYT9Q86SS6 491 aa22.81■■□□□ 1.24
SCAMP4-210ENST00000588555 OR6K3Q8NGY3 331 aa22.81■■□□□ 1.24
SCAMP4-210ENST00000588555 PPP1R14AQ96A00 147 aa22.81■■□□□ 1.24
SCAMP4-210ENST00000588555 KCNN2Q9H2S1 579 aa22.81■■□□□ 1.24
SCAMP4-210ENST00000588555 NIPAL2Q9H841 368 aa22.81■■□□□ 1.24
SCAMP4-210ENST00000588555 FAM206AQ9NX38 181 aa22.81■■□□□ 1.24
SCAMP4-210ENST00000588555 GALNT8Q9NY28 637 aa22.81■■□□□ 1.24
SCAMP4-210ENST00000588555 SLC5A6Q9Y289 635 aa22.81■■□□□ 1.24
SCAMP4-210ENST00000588555 SERPINA3P01011 423 aa22.81■■□□□ 1.24
SCAMP4-210ENST00000588555 ABHD12BQ7Z5M8 362 aaPredicted RBP22.81■■□□□ 1.24
SCAMP4-210ENST00000588555 RPRMLQ8N4K4 120 aa22.81■■□□□ 1.24
SCAMP4-210ENST00000588555 FGFBP3Q8TAT2 258 aa22.81■■□□□ 1.24
SCAMP4-210ENST00000588555 ZNF224Q9NZL3 707 aa22.81■■□□□ 1.24
SCAMP4-210ENST00000588555 PMF1-BGLAPU3KQ54 211 aa22.81■■□□□ 1.24
SCAMP4-210ENST00000588555 RP1L1Q8IWN7 2480 aaPredicted RBP22.81■■□□□ 1.24
SCAMP4-210ENST00000588555 TMEM269A0A1B0GVZ9 245 aa22.8■■□□□ 1.24
SCAMP4-210ENST00000588555 TNFSF13O75888 250 aa22.8■■□□□ 1.24
SCAMP4-210ENST00000588555 IL18BPO95998 194 aa22.8■■□□□ 1.24
SCAMP4-210ENST00000588555 ITGA5P08648 1049 aa22.8■■□□□ 1.24
SCAMP4-210ENST00000588555 ZNF32P17041 273 aa22.8■■□□□ 1.24
SCAMP4-210ENST00000588555 CTSSP25774 331 aa22.8■■□□□ 1.24
SCAMP4-210ENST00000588555 MPGP29372 298 aa22.8■■□□□ 1.24
SCAMP4-210ENST00000588555 RPS19P39019 145 aaKnown RBP22.8■■□□□ 1.24
SCAMP4-210ENST00000588555 LSAMPQ13449 338 aa22.8■■□□□ 1.24
SCAMP4-210ENST00000588555 ZNF829Q3KNS6 432 aaPredicted RBP22.8■■□□□ 1.24
SCAMP4-210ENST00000588555 ELFN2Q5R3F8 820 aa22.8■■□□□ 1.24
SCAMP4-210ENST00000588555 VWA1Q6PCB0 445 aa22.8■■□□□ 1.24
SCAMP4-210ENST00000588555 SLC16A14Q7RTX9 510 aa22.8■■□□□ 1.24
SCAMP4-210ENST00000588555 CEACAM19Q7Z692 300 aa22.8■■□□□ 1.24
SCAMP4-210ENST00000588555 CNEP1R1Q8N9A8 125 aa22.8■■□□□ 1.24
SCAMP4-210ENST00000588555 DACH2Q96NX9 599 aa22.8■■□□□ 1.24
SCAMP4-210ENST00000588555 ATF6BQ99941 703 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms